RNA–Protein interactions for RNA: ENST00000568958.1

AC009407.1-201, humanhuman

BASIC

Gene AC009407.1, Length 598 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009407.1-201ENST00000568958 NISCHQ9Y2I1 1504 aa39.28■■■■□ 3.88
AC009407.1-201ENST00000568958 CCDC180Q9P1Z9 1646 aa34.87■■■■□ 3.17
AC009407.1-201ENST00000568958 ABCC9O60706 1549 aa34.52■■■■□ 3.12
AC009407.1-201ENST00000568958 RB1CC1Q8TDY2 1594 aa32.99■■■□□ 2.87
AC009407.1-201ENST00000568958 DCAF8L2P0C7V8 631 aa32.96■■■□□ 2.87
AC009407.1-201ENST00000568958 NACADO15069 1562 aa32.92■■■□□ 2.86
AC009407.1-201ENST00000568958 MYO15BQ96JP2 1530 aa32.68■■■□□ 2.82
AC009407.1-201ENST00000568958 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
AC009407.1-201ENST00000568958 DCAF1Q9Y4B6 1507 aa32.45■■■□□ 2.78
AC009407.1-201ENST00000568958 PABPN1Q86U42 306 aaKnown RBP eCLIP32.31■■■□□ 2.76
AC009407.1-201ENST00000568958 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
AC009407.1-201ENST00000568958 BICRAQ9NZM4 1560 aa32.12■■■□□ 2.73
AC009407.1-201ENST00000568958 DNAJC5BQ9UF47 199 aa32.11■■■□□ 2.73
AC009407.1-201ENST00000568958 SCRIBQ14160 1630 aa31.88■■■□□ 2.69
AC009407.1-201ENST00000568958 SHROOM4Q9ULL8 1493 aa31.63■■■□□ 2.65
AC009407.1-201ENST00000568958 EIF4G1Q04637 1599 aaKnown RBP31.24■■■□□ 2.59
AC009407.1-201ENST00000568958 CC2D2AQ9P2K1 1620 aa31.16■■■□□ 2.58
AC009407.1-201ENST00000568958 CECR2Q9BXF3 1484 aa31.03■■■□□ 2.56
AC009407.1-201ENST00000568958 NCAPD3P42695 1498 aa30.48■■■□□ 2.47
AC009407.1-201ENST00000568958 SMARCA4P51532 1647 aa30.47■■■□□ 2.47
AC009407.1-201ENST00000568958 ATAD2BQ9ULI0 1458 aa30.45■■■□□ 2.47
AC009407.1-201ENST00000568958 BAZ1AQ9NRL2 1556 aaPredicted RBP30.39■■■□□ 2.46
AC009407.1-201ENST00000568958 MROH2BQ7Z745 1585 aa30.3■■■□□ 2.44
AC009407.1-201ENST00000568958 SMARCA2P51531 1590 aa30.29■■■□□ 2.44
AC009407.1-201ENST00000568958 HMGXB3Q12766 1538 aa30.21■■■□□ 2.43
AC009407.1-201ENST00000568958 PEG3Q9GZU2 1588 aa30.2■■■□□ 2.42
AC009407.1-201ENST00000568958 BAZ1BQ9UIG0 1483 aaKnown RBP30.12■■■□□ 2.41
AC009407.1-201ENST00000568958 WIZO95785 1651 aa29.9■■■□□ 2.38
AC009407.1-201ENST00000568958 RSF1Q96T23 1441 aaPredicted RBP29.89■■■□□ 2.38
AC009407.1-201ENST00000568958 NESP48681 1621 aa29.84■■■□□ 2.37
AC009407.1-201ENST00000568958 ERCC6Q03468 1493 aa29.69■■■□□ 2.34
AC009407.1-201ENST00000568958 LAMC3Q9Y6N6 1575 aa29.6■■■□□ 2.33
AC009407.1-201ENST00000568958 CADPSQ9ULU8 1353 aa29.58■■■□□ 2.33
AC009407.1-201ENST00000568958 TOP2AP11388 1531 aaKnown RBP29.54■■■□□ 2.32
AC009407.1-201ENST00000568958 CUX2O14529 1486 aa29.48■■■□□ 2.31
AC009407.1-201ENST00000568958 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
AC009407.1-201ENST00000568958 CFTRP13569 1480 aa29.34■■■□□ 2.29
AC009407.1-201ENST00000568958 THOC2Q8NI27 1593 aaKnown RBP29.34■■■□□ 2.29
AC009407.1-201ENST00000568958 KIF21AQ7Z4S6 1674 aa29.32■■■□□ 2.28
AC009407.1-201ENST00000568958 CCDC88BA6NC98 1476 aa29.29■■■□□ 2.28
AC009407.1-201ENST00000568958 FANCD2Q9BXW9 1451 aa29.19■■■□□ 2.26
AC009407.1-201ENST00000568958 MRC2Q9UBG0 1479 aa29.17■■■□□ 2.26
AC009407.1-201ENST00000568958 CEP164Q9UPV0 1460 aa29.13■■■□□ 2.25
AC009407.1-201ENST00000568958 WDR62O43379 1518 aa29.08■■■□□ 2.25
AC009407.1-201ENST00000568958 DNAJC5Q9H3Z4 198 aa29.01■■■□□ 2.23
AC009407.1-201ENST00000568958 URB2Q14146 1524 aaKnown RBP28.96■■■□□ 2.23
AC009407.1-201ENST00000568958 SUPT5HO00267 1087 aaKnown RBP28.95■■■□□ 2.22
AC009407.1-201ENST00000568958 PRDM2Q13029 1718 aa28.86■■■□□ 2.21
AC009407.1-201ENST00000568958 TOPBP1Q92547 1522 aa28.71■■■□□ 2.19
AC009407.1-201ENST00000568958 ABCC8Q09428 1581 aa28.62■■■□□ 2.17
AC009407.1-201ENST00000568958 DNMBPQ6XZF7 1577 aa28.59■■■□□ 2.17
AC009407.1-201ENST00000568958 IFT140Q96RY7 1462 aa28.56■■■□□ 2.16
AC009407.1-201ENST00000568958 ZNF608Q9ULD9 1512 aaPredicted RBP28.53■■■□□ 2.16
AC009407.1-201ENST00000568958 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
AC009407.1-201ENST00000568958 CUX1P39880 1505 aa28.43■■■□□ 2.14
AC009407.1-201ENST00000568958 TARBP1Q13395 1621 aaKnown RBP28.4■■■□□ 2.14
AC009407.1-201ENST00000568958 RAD54L2Q9Y4B4 1467 aa28.38■■■□□ 2.13
AC009407.1-201ENST00000568958 SOGA1O94964 1423 aa28.35■■■□□ 2.13
AC009407.1-201ENST00000568958 AQRO60306 1485 aaKnown RBP eCLIP28.35■■■□□ 2.13
AC009407.1-201ENST00000568958 FGD5Q6ZNL6 1462 aa28.34■■■□□ 2.13
AC009407.1-201ENST00000568958 OSCARQ8IYS5 282 aa28.3■■■□□ 2.12
AC009407.1-201ENST00000568958 EIF4G3O43432 1585 aaKnown RBP28.28■■■□□ 2.12
AC009407.1-201ENST00000568958 TDRD9Q8NDG6 1382 aaKnown RBP28.26■■■□□ 2.12
AC009407.1-201ENST00000568958 WRNQ14191 1432 aaPredicted RBP eCLIP28.12■■■□□ 2.09
AC009407.1-201ENST00000568958 SYNJ1O43426 1573 aa28.07■■■□□ 2.08
AC009407.1-201ENST00000568958 ABCA10Q8WWZ4 1543 aa28.06■■■□□ 2.08
AC009407.1-201ENST00000568958 WDR97A6NE52 1622 aa28.05■■■□□ 2.08
AC009407.1-201ENST00000568958 TOP2BQ02880 1626 aa28.04■■■□□ 2.08
AC009407.1-201ENST00000568958 FBLN2P98095 1184 aa28.02■■■□□ 2.08
AC009407.1-201ENST00000568958 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
AC009407.1-201ENST00000568958 GRIN2BQ13224 1484 aa28.01■■■□□ 2.07
AC009407.1-201ENST00000568958 BIVM-ERCC5R4GMW8 1640 aa28■■■□□ 2.07
AC009407.1-201ENST00000568958 GAPVD1Q14C86 1478 aa27.99■■■□□ 2.07
AC009407.1-201ENST00000568958 MAGI1Q96QZ7 1491 aaPredicted RBP27.94■■■□□ 2.06
AC009407.1-201ENST00000568958 CHD1O14646 1710 aa27.93■■■□□ 2.06
AC009407.1-201ENST00000568958 ABCA5Q8WWZ7 1642 aa27.92■■■□□ 2.06
AC009407.1-201ENST00000568958 CHMP7Q8WUX9 453 aaPredicted RBP27.9■■■□□ 2.06
AC009407.1-201ENST00000568958 TRIM41Q8WV44 630 aa27.89■■■□□ 2.06
AC009407.1-201ENST00000568958 SYNJ2O15056 1496 aa27.85■■■□□ 2.05
AC009407.1-201ENST00000568958 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
AC009407.1-201ENST00000568958 RIMBP3CA6NJZ7 1639 aa27.79■■■□□ 2.04
AC009407.1-201ENST00000568958 RIMBP3BA6NNM3 1639 aa27.79■■■□□ 2.04
AC009407.1-201ENST00000568958 RIMBP3Q9UFD9 1639 aa27.79■■■□□ 2.04
AC009407.1-201ENST00000568958 ARHGEF11O15085 1522 aa27.79■■■□□ 2.04
AC009407.1-201ENST00000568958 CLASP1Q7Z460 1538 aa27.72■■■□□ 2.03
AC009407.1-201ENST00000568958 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
AC009407.1-201ENST00000568958 ADAMTS12P58397 1594 aa27.66■■■□□ 2.02
AC009407.1-201ENST00000568958 FHAD1B1AJZ9 1412 aa27.66■■■□□ 2.02
AC009407.1-201ENST00000568958 GRIN2AQ12879 1464 aa27.64■■■□□ 2.02
AC009407.1-201ENST00000568958 CYB5RLQ6IPT4 315 aa27.63■■■□□ 2.01
AC009407.1-201ENST00000568958 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
AC009407.1-201ENST00000568958 IGF1RP08069 1367 aa27.58■■■□□ 2.01
AC009407.1-201ENST00000568958 NUP160Q12769 1436 aa27.58■■■□□ 2
AC009407.1-201ENST00000568958 KIF27Q86VH2 1401 aa27.53■■■□□ 2
AC009407.1-201ENST00000568958 CEP170Q5SW79 1584 aa27.52■■■□□ 2
AC009407.1-201ENST00000568958 ERCC6L2Q5T890 1561 aa27.39■■□□□ 1.97
AC009407.1-201ENST00000568958 JPH4Q96JJ6 628 aa27.34■■□□□ 1.97
AC009407.1-201ENST00000568958 RUSC2Q8N2Y8 1516 aa27.34■■□□□ 1.97
AC009407.1-201ENST00000568958 CARMIL1Q5VZK9 1371 aa27.34■■□□□ 1.97
AC009407.1-201ENST00000568958 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms