RNA–Protein interactions for RNA: ENST00000568674.1

YPEL3-210, Transcript of yippee like 3, humanhuman

TSL 2

Gene YPEL3, Length 371 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL3-210ENST00000568674 SF3B1O75533 1304 aaKnown RBP eCLIP20.53■□□□□ 0.886e-6■■■■■ 90.4
YPEL3-210ENST00000568674 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.68■■□□□ 1.224e-12■■■■■ 48.5
YPEL3-210ENST00000568674 DDX42Q86XP3 938 aaKnown RBP eCLIP19.73■□□□□ 0.756e-10■■■■■ 46
YPEL3-210ENST00000568674 PCBP1Q15365 356 aaKnown RBP eCLIP20.67■□□□□ 0.96e-7■■■■■ 35.7
YPEL3-210ENST00000568674 AATFQ9NY61 560 aaKnown RBP eCLIP22.77■■□□□ 1.245e-8■■■■■ 31.1
YPEL3-210ENST00000568674 DDX3XO00571 662 aaKnown RBP eCLIP18.49■□□□□ 0.552e-10■■■■■ 28.8
YPEL3-210ENST00000568674 SF3B4Q15427 424 aaKnown RBP eCLIP16.99■□□□□ 0.317e-10■■■■■ 28.5
YPEL3-210ENST00000568674 SF3A3Q12874 501 aaKnown RBP eCLIP15.53■□□□□ 0.082e-6■■■■■ 26.9
YPEL3-210ENST00000568674 AQRO60306 1485 aaKnown RBP eCLIP33.97■■■■□ 3.036e-9■■■■□ 26.1
YPEL3-210ENST00000568674 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.26■■□□□ 1.312e-8■■■■□ 23.5
YPEL3-210ENST00000568674 RBM15Q96T37 977 aaKnown RBP eCLIP18.67■□□□□ 0.584e-6■■■■□ 20
YPEL3-210ENST00000568674 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29■■■□□ 2.237e-9■■■□□ 18.8
YPEL3-210ENST00000568674 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.29■□□□□ 0.363e-9■■■□□ 18.1
YPEL3-210ENST00000568674 EFTUD2Q15029 972 aaKnown RBP eCLIP17.21■□□□□ 0.351e-7■■■□□ 16.1
YPEL3-210ENST00000568674 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.39■■□□□ 1.177e-9■■■□□ 15.3
YPEL3-210ENST00000568674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.05■□□□□ 0.164e-13■■□□□ 14
YPEL3-210ENST00000568674 DDX6P26196 483 aaKnown RBP eCLIP19.98■□□□□ 0.791e-5■■□□□ 13
YPEL3-210ENST00000568674 SMNDC1O75940 238 aaKnown RBP eCLIP16.79■□□□□ 0.282e-8■■□□□ 11.9
YPEL3-210ENST00000568674 HNRNPKP61978 463 aaKnown RBP eCLIP18.91■□□□□ 0.626e-8■□□□□ 11
YPEL3-210ENST00000568674 LSM11P83369 360 aaKnown RBP eCLIP16.22■□□□□ 0.194e-6■□□□□ 10.9
YPEL3-210ENST00000568674 YBX3P16989 372 aaKnown RBP eCLIP25.57■■□□□ 1.682e-6■□□□□ 10.2
YPEL3-210ENST00000568674 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.95■■□□□ 1.14e-8■□□□□ 10.1
Retrieved 22 of 22 RNA–protein pairs in 6.5 ms