RNA–Protein interactions for RNA: ENST00000568560.1

AC010542.2-201, humanhuman

TSL 5 BASIC

Gene AC010542.2, Length 511 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.2-201ENST00000568560 AEBP2Q6ZN18 517 aaPredicted RBP26.37■■□□□ 1.81
AC010542.2-201ENST00000568560 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
AC010542.2-201ENST00000568560 NISCHQ9Y2I1 1504 aa22.69■■□□□ 1.22
AC010542.2-201ENST00000568560 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
AC010542.2-201ENST00000568560 PHF23Q9BUL5 403 aaPredicted RBP22.24■■□□□ 1.15
AC010542.2-201ENST00000568560 FOXD1Q16676 465 aa21.14■□□□□ 0.97
AC010542.2-201ENST00000568560 POTEDQ86YR6 584 aa20.58■□□□□ 0.89
AC010542.2-201ENST00000568560 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
AC010542.2-201ENST00000568560 MSH5O43196 834 aa20.06■□□□□ 0.8
AC010542.2-201ENST00000568560 ABCC9O60706 1549 aa19.71■□□□□ 0.75
AC010542.2-201ENST00000568560 PIAS4Q8N2W9 510 aaPredicted RBP19.58■□□□□ 0.72
AC010542.2-201ENST00000568560 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
AC010542.2-201ENST00000568560 PPP6R1Q9UPN7 881 aa19.29■□□□□ 0.68
AC010542.2-201ENST00000568560 ADRA2BP18089 450 aa19.17■□□□□ 0.66
AC010542.2-201ENST00000568560 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
AC010542.2-201ENST00000568560 NACADO15069 1562 aa18.92■□□□□ 0.62
AC010542.2-201ENST00000568560 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
AC010542.2-201ENST00000568560 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
AC010542.2-201ENST00000568560 MYO15BQ96JP2 1530 aa18.81■□□□□ 0.6
AC010542.2-201ENST00000568560 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
AC010542.2-201ENST00000568560 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
AC010542.2-201ENST00000568560 PABPN1Q86U42 306 aaKnown RBP eCLIP18.46■□□□□ 0.55
AC010542.2-201ENST00000568560 BICRAQ9NZM4 1560 aa18.39■□□□□ 0.53
AC010542.2-201ENST00000568560 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
AC010542.2-201ENST00000568560 SHROOM4Q9ULL8 1493 aa18.14■□□□□ 0.49
AC010542.2-201ENST00000568560 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
AC010542.2-201ENST00000568560 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
AC010542.2-201ENST00000568560 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
AC010542.2-201ENST00000568560 CC2D2AQ9P2K1 1620 aa17.81■□□□□ 0.44
AC010542.2-201ENST00000568560 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
AC010542.2-201ENST00000568560 CECR2Q9BXF3 1484 aa17.71■□□□□ 0.43
AC010542.2-201ENST00000568560 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
AC010542.2-201ENST00000568560 SMARCA4P51532 1647 aa17.58■□□□□ 0.41
AC010542.2-201ENST00000568560 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
AC010542.2-201ENST00000568560 CACNB1Q02641 598 aaPredicted RBP17.53■□□□□ 0.4
AC010542.2-201ENST00000568560 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
AC010542.2-201ENST00000568560 MROH2BQ7Z745 1585 aa17.5■□□□□ 0.39
AC010542.2-201ENST00000568560 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
AC010542.2-201ENST00000568560 SMARCA2P51531 1590 aa17.44■□□□□ 0.38
AC010542.2-201ENST00000568560 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
AC010542.2-201ENST00000568560 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
AC010542.2-201ENST00000568560 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
AC010542.2-201ENST00000568560 RSF1Q96T23 1441 aaPredicted RBP17.32■□□□□ 0.36
AC010542.2-201ENST00000568560 WIZO95785 1651 aa17.31■□□□□ 0.36
AC010542.2-201ENST00000568560 TOP2AP11388 1531 aaKnown RBP17.11■□□□□ 0.33
AC010542.2-201ENST00000568560 NESP48681 1621 aa17.08■□□□□ 0.32
AC010542.2-201ENST00000568560 RNF39Q9H2S5 420 aa17.05■□□□□ 0.32
AC010542.2-201ENST00000568560 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
AC010542.2-201ENST00000568560 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
AC010542.2-201ENST00000568560 CADPSQ9ULU8 1353 aa16.99■□□□□ 0.31
AC010542.2-201ENST00000568560 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
AC010542.2-201ENST00000568560 ERCC6Q03468 1493 aa16.95■□□□□ 0.3
AC010542.2-201ENST00000568560 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
AC010542.2-201ENST00000568560 SUPT5HO00267 1087 aaKnown RBP16.92■□□□□ 0.3
AC010542.2-201ENST00000568560 PDS5BQ9NTI5 1447 aa16.88■□□□□ 0.29
AC010542.2-201ENST00000568560 CFTRP13569 1480 aa16.88■□□□□ 0.29
AC010542.2-201ENST00000568560 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.28
AC010542.2-201ENST00000568560 PPP4R3CPQ6ZMV5 832 aa16.81■□□□□ 0.28
AC010542.2-201ENST00000568560 C1QBPQ07021 282 aaKnown RBP16.79■□□□□ 0.28
AC010542.2-201ENST00000568560 FANCD2Q9BXW9 1451 aa16.78■□□□□ 0.28
AC010542.2-201ENST00000568560 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.28
AC010542.2-201ENST00000568560 CUX2O14529 1486 aa16.75■□□□□ 0.27
AC010542.2-201ENST00000568560 CEP164Q9UPV0 1460 aa16.73■□□□□ 0.27
AC010542.2-201ENST00000568560 MRC2Q9UBG0 1479 aa16.71■□□□□ 0.27
AC010542.2-201ENST00000568560 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
AC010542.2-201ENST00000568560 PRDM2Q13029 1718 aa16.67■□□□□ 0.26
AC010542.2-201ENST00000568560 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
AC010542.2-201ENST00000568560 WDR62O43379 1518 aa16.66■□□□□ 0.26
AC010542.2-201ENST00000568560 URB2Q14146 1524 aaKnown RBP16.62■□□□□ 0.25
AC010542.2-201ENST00000568560 TOPBP1Q92547 1522 aa16.51■□□□□ 0.23
AC010542.2-201ENST00000568560 ABCC8Q09428 1581 aa16.47■□□□□ 0.23
AC010542.2-201ENST00000568560 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
AC010542.2-201ENST00000568560 CUX1P39880 1505 aa16.41■□□□□ 0.22
AC010542.2-201ENST00000568560 IFT140Q96RY7 1462 aa16.39■□□□□ 0.21
AC010542.2-201ENST00000568560 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
AC010542.2-201ENST00000568560 ZNF608Q9ULD9 1512 aaPredicted RBP16.36■□□□□ 0.21
AC010542.2-201ENST00000568560 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
AC010542.2-201ENST00000568560 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
AC010542.2-201ENST00000568560 RAD54L2Q9Y4B4 1467 aa16.34■□□□□ 0.21
AC010542.2-201ENST00000568560 TARBP1Q13395 1621 aaKnown RBP16.33■□□□□ 0.2
AC010542.2-201ENST00000568560 SOGA1O94964 1423 aa16.32■□□□□ 0.2
AC010542.2-201ENST00000568560 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
AC010542.2-201ENST00000568560 SYNJ1O43426 1573 aa16.28■□□□□ 0.2
AC010542.2-201ENST00000568560 AQRO60306 1485 aaKnown RBP eCLIP16.27■□□□□ 0.19
AC010542.2-201ENST00000568560 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
AC010542.2-201ENST00000568560 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
AC010542.2-201ENST00000568560 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
AC010542.2-201ENST00000568560 BIVM-ERCC5R4GMW8 1640 aa16.24■□□□□ 0.19
AC010542.2-201ENST00000568560 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
AC010542.2-201ENST00000568560 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
AC010542.2-201ENST00000568560 GAPVD1Q14C86 1478 aa16.12■□□□□ 0.17
AC010542.2-201ENST00000568560 ABCA5Q8WWZ7 1642 aa16.11■□□□□ 0.17
AC010542.2-201ENST00000568560 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
AC010542.2-201ENST00000568560 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
AC010542.2-201ENST00000568560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
AC010542.2-201ENST00000568560 SNAPC4Q5SXM2 1469 aa16.1■□□□□ 0.17
AC010542.2-201ENST00000568560 FBLN2P98095 1184 aa16.05■□□□□ 0.16
AC010542.2-201ENST00000568560 PBRM1Q86U86 1689 aa16.05■□□□□ 0.16
AC010542.2-201ENST00000568560 MAGI1Q96QZ7 1491 aaPredicted RBP16.04■□□□□ 0.16
AC010542.2-201ENST00000568560 CHD1O14646 1710 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms