RNA–Protein interactions for RNA: ENST00000568494.1

ZNRF1-208, Transcript of zinc and ring finger 1, humanhuman

TSL 2

Gene ZNRF1, Length 2,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1-208ENST00000568494 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.27
ZNRF1-208ENST00000568494 CCDC180Q9P1Z9 1646 aa25.71■■□□□ 1.71
ZNRF1-208ENST00000568494 ABCC9O60706 1549 aa24.88■■□□□ 1.57
ZNRF1-208ENST00000568494 ZCCHC6Q5VYS8 1495 aaKnown RBP24.47■■□□□ 1.51
ZNRF1-208ENST00000568494 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
ZNRF1-208ENST00000568494 SHROOM4Q9ULL8 1493 aa24.19■■□□□ 1.46
ZNRF1-208ENST00000568494 DCAF1Q9Y4B6 1507 aa24.11■■□□□ 1.45
ZNRF1-208ENST00000568494 NACADO15069 1562 aa24.08■■□□□ 1.45
ZNRF1-208ENST00000568494 MYO15BQ96JP2 1530 aa24.04■■□□□ 1.44
ZNRF1-208ENST00000568494 RB1CC1Q8TDY2 1594 aa24.02■■□□□ 1.44
ZNRF1-208ENST00000568494 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
ZNRF1-208ENST00000568494 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
ZNRF1-208ENST00000568494 SUPT5HO00267 1087 aaKnown RBP23.47■■□□□ 1.35
ZNRF1-208ENST00000568494 PABPN1Q86U42 306 aaKnown RBP eCLIP23.37■■□□□ 1.33
ZNRF1-208ENST00000568494 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
ZNRF1-208ENST00000568494 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
ZNRF1-208ENST00000568494 RSF1Q96T23 1441 aaPredicted RBP22.75■■□□□ 1.23
ZNRF1-208ENST00000568494 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
ZNRF1-208ENST00000568494 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
ZNRF1-208ENST00000568494 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
ZNRF1-208ENST00000568494 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
ZNRF1-208ENST00000568494 MROH2BQ7Z745 1585 aa22.55■■□□□ 1.2
ZNRF1-208ENST00000568494 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
ZNRF1-208ENST00000568494 CC2D2AQ9P2K1 1620 aa22.5■■□□□ 1.19
ZNRF1-208ENST00000568494 ATAD2BQ9ULI0 1458 aa22.35■■□□□ 1.17
ZNRF1-208ENST00000568494 WIZO95785 1651 aa22.34■■□□□ 1.17
ZNRF1-208ENST00000568494 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
ZNRF1-208ENST00000568494 SMARCA2P51531 1590 aa22.29■■□□□ 1.16
ZNRF1-208ENST00000568494 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
ZNRF1-208ENST00000568494 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
ZNRF1-208ENST00000568494 HMGXB3Q12766 1538 aa22.15■■□□□ 1.14
ZNRF1-208ENST00000568494 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
ZNRF1-208ENST00000568494 TRIM41Q8WV44 630 aa21.97■■□□□ 1.11
ZNRF1-208ENST00000568494 CCDC88BA6NC98 1476 aa21.93■■□□□ 1.1
ZNRF1-208ENST00000568494 LOC105371045A0A1W2PR82 267 aa21.87■■□□□ 1.09
ZNRF1-208ENST00000568494 FAM9AQ8IZU1 332 aaPredicted RBP21.68■■□□□ 1.06
ZNRF1-208ENST00000568494 NESP48681 1621 aa21.67■■□□□ 1.06
ZNRF1-208ENST00000568494 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.05
ZNRF1-208ENST00000568494 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
ZNRF1-208ENST00000568494 CFTRP13569 1480 aa21.59■■□□□ 1.05
ZNRF1-208ENST00000568494 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.04
ZNRF1-208ENST00000568494 EHMT2Q96KQ7 1210 aa21.44■■□□□ 1.02
ZNRF1-208ENST00000568494 PRDM2Q13029 1718 aa21.44■■□□□ 1.02
ZNRF1-208ENST00000568494 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
ZNRF1-208ENST00000568494 FANCD2Q9BXW9 1451 aa21.39■■□□□ 1.02
ZNRF1-208ENST00000568494 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.02
ZNRF1-208ENST00000568494 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
ZNRF1-208ENST00000568494 ERCC6Q03468 1493 aa21.36■■□□□ 1.01
ZNRF1-208ENST00000568494 SOGA1O94964 1423 aa21.32■■□□□ 1
ZNRF1-208ENST00000568494 CEP164Q9UPV0 1460 aa21.31■■□□□ 1
ZNRF1-208ENST00000568494 SYNJ1O43426 1573 aa21.27■■□□□ 1
ZNRF1-208ENST00000568494 PCGF6Q9BYE7 350 aa21.25■□□□□ 0.99
ZNRF1-208ENST00000568494 RUSC2Q8N2Y8 1516 aa21.24■□□□□ 0.99
ZNRF1-208ENST00000568494 EEA1Q15075 1411 aa21.21■□□□□ 0.99
ZNRF1-208ENST00000568494 CSRNP3Q8WYN3 585 aa21.19■□□□□ 0.98
ZNRF1-208ENST00000568494 THOC2Q8NI27 1593 aaKnown RBP21.18■□□□□ 0.98
ZNRF1-208ENST00000568494 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
ZNRF1-208ENST00000568494 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
ZNRF1-208ENST00000568494 CUX1P39880 1505 aa21.12■□□□□ 0.97
ZNRF1-208ENST00000568494 TOP2BQ02880 1626 aa21.1■□□□□ 0.97
ZNRF1-208ENST00000568494 TOPBP1Q92547 1522 aa21.1■□□□□ 0.97
ZNRF1-208ENST00000568494 WDR62O43379 1518 aa21.1■□□□□ 0.97
ZNRF1-208ENST00000568494 DNMBPQ6XZF7 1577 aa21.09■□□□□ 0.97
ZNRF1-208ENST00000568494 TRIM26Q12899 539 aaPredicted RBP21.07■□□□□ 0.96
ZNRF1-208ENST00000568494 BIVM-ERCC5R4GMW8 1640 aa21.05■□□□□ 0.96
ZNRF1-208ENST00000568494 TNIKQ9UKE5 1360 aa21.03■□□□□ 0.96
ZNRF1-208ENST00000568494 UBTFP17480 764 aaKnown RBP20.99■□□□□ 0.95
ZNRF1-208ENST00000568494 GOLGA3Q08378 1498 aa20.99■□□□□ 0.95
ZNRF1-208ENST00000568494 FGD5Q6ZNL6 1462 aa20.97■□□□□ 0.95
ZNRF1-208ENST00000568494 POLA1P09884 1462 aaPredicted RBP20.96■□□□□ 0.95
ZNRF1-208ENST00000568494 CEP162Q5TB80 1403 aa20.96■□□□□ 0.95
ZNRF1-208ENST00000568494 CUX2O14529 1486 aa20.94■□□□□ 0.94
ZNRF1-208ENST00000568494 KIF21BO75037 1637 aa20.91■□□□□ 0.94
ZNRF1-208ENST00000568494 HRCP23327 699 aa20.91■□□□□ 0.94
ZNRF1-208ENST00000568494 RAD54L2Q9Y4B4 1467 aa20.9■□□□□ 0.94
ZNRF1-208ENST00000568494 PPARGC1BQ86YN6 1023 aaKnown RBP20.85■□□□□ 0.93
ZNRF1-208ENST00000568494 TARBP1Q13395 1621 aaKnown RBP20.85■□□□□ 0.93
ZNRF1-208ENST00000568494 RAPGEF2Q9Y4G8 1499 aa20.83■□□□□ 0.93
ZNRF1-208ENST00000568494 IFT140Q96RY7 1462 aa20.83■□□□□ 0.92
ZNRF1-208ENST00000568494 KIF27Q86VH2 1401 aa20.79■□□□□ 0.92
ZNRF1-208ENST00000568494 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
ZNRF1-208ENST00000568494 ABCA10Q8WWZ4 1543 aa20.76■□□□□ 0.91
ZNRF1-208ENST00000568494 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
ZNRF1-208ENST00000568494 PRXQ9BXM0 1461 aa20.75■□□□□ 0.91
ZNRF1-208ENST00000568494 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
ZNRF1-208ENST00000568494 AQRO60306 1485 aaKnown RBP eCLIP20.73■□□□□ 0.914e-6■■■■□ 21
ZNRF1-208ENST00000568494 CLIP1P30622 1438 aa20.7■□□□□ 0.9
ZNRF1-208ENST00000568494 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
ZNRF1-208ENST00000568494 EIF4G3O43432 1585 aaKnown RBP20.67■□□□□ 0.9
ZNRF1-208ENST00000568494 ABCA5Q8WWZ7 1642 aa20.65■□□□□ 0.9
ZNRF1-208ENST00000568494 RANGAP1P46060 587 aaPredicted RBP20.64■□□□□ 0.89
ZNRF1-208ENST00000568494 GAPVD1Q14C86 1478 aa20.64■□□□□ 0.89
ZNRF1-208ENST00000568494 IGF1RP08069 1367 aa20.63■□□□□ 0.89
ZNRF1-208ENST00000568494 TTBK1Q5TCY1 1321 aaPredicted RBP20.59■□□□□ 0.89
ZNRF1-208ENST00000568494 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
ZNRF1-208ENST00000568494 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
ZNRF1-208ENST00000568494 VPS8Q8N3P4 1428 aa20.55■□□□□ 0.88
ZNRF1-208ENST00000568494 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
ZNRF1-208ENST00000568494 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
ZNRF1-208ENST00000568494 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms