RNA–Protein interactions for RNA: ENST00000566929.1

AC008938.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008938.1, Length 6,510 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008938.1-201ENST00000566929 NISCHQ9Y2I1 1504 aa16.95■□□□□ 0.3
AC008938.1-201ENST00000566929 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
AC008938.1-201ENST00000566929 SUPT5HO00267 1087 aaKnown RBP15.56■□□□□ 0.08
AC008938.1-201ENST00000566929 SHROOM4Q9ULL8 1493 aa15.51■□□□□ 0.07
AC008938.1-201ENST00000566929 FAM9AQ8IZU1 332 aaPredicted RBP14.97□□□□□ -0.01
AC008938.1-201ENST00000566929 APLP2Q06481 763 aa14.88□□□□□ -0.03
AC008938.1-201ENST00000566929 EHMT2Q96KQ7 1210 aa14.76□□□□□ -0.05
AC008938.1-201ENST00000566929 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
AC008938.1-201ENST00000566929 ABCC9O60706 1549 aa14.51□□□□□ -0.09
AC008938.1-201ENST00000566929 UBTFP17480 764 aaKnown RBP14.38□□□□□ -0.11
AC008938.1-201ENST00000566929 CCDC180Q9P1Z9 1646 aa14.38□□□□□ -0.11
AC008938.1-201ENST00000566929 RANGAP1P46060 587 aaPredicted RBP14.33□□□□□ -0.12
AC008938.1-201ENST00000566929 ATP1B4Q9UN42 357 aaPredicted RBP14.33□□□□□ -0.12
AC008938.1-201ENST00000566929 PELP1Q8IZL8 1130 aaKnown RBP14.26□□□□□ -0.13
AC008938.1-201ENST00000566929 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
AC008938.1-201ENST00000566929 ZEB1P37275 1124 aaPredicted RBP14.23□□□□□ -0.13
AC008938.1-201ENST00000566929 PABPN1Q86U42 306 aaKnown RBP eCLIP14.16□□□□□ -0.14
AC008938.1-201ENST00000566929 PCGF6Q9BYE7 350 aa14.14□□□□□ -0.15
AC008938.1-201ENST00000566929 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
AC008938.1-201ENST00000566929 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
AC008938.1-201ENST00000566929 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
AC008938.1-201ENST00000566929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
AC008938.1-201ENST00000566929 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
AC008938.1-201ENST00000566929 RB1CC1Q8TDY2 1594 aa13.96□□□□□ -0.17
AC008938.1-201ENST00000566929 CHIC1Q5VXU3 224 aa13.95□□□□□ -0.18
AC008938.1-201ENST00000566929 TRIM26Q12899 539 aaPredicted RBP13.89□□□□□ -0.19
AC008938.1-201ENST00000566929 MYT1LQ9UL68 1186 aa13.88□□□□□ -0.19
AC008938.1-201ENST00000566929 NACADO15069 1562 aa13.84□□□□□ -0.19
AC008938.1-201ENST00000566929 CENPBP07199 599 aaPredicted RBP13.83□□□□□ -0.2
AC008938.1-201ENST00000566929 PPARGC1BQ86YN6 1023 aaKnown RBP13.74□□□□□ -0.21
AC008938.1-201ENST00000566929 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.21
AC008938.1-201ENST00000566929 ITGAEP38570 1179 aa13.71□□□□□ -0.22
AC008938.1-201ENST00000566929 DCAF1Q9Y4B6 1507 aa13.62□□□□□ -0.23
AC008938.1-201ENST00000566929 FBLN2P98095 1184 aa13.61□□□□□ -0.23
AC008938.1-201ENST00000566929 NEFLP07196 543 aa13.6□□□□□ -0.23
AC008938.1-201ENST00000566929 FAM50AQ14320 339 aaKnown RBP13.58□□□□□ -0.24
AC008938.1-201ENST00000566929 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
AC008938.1-201ENST00000566929 ERICH6Q7L0X2 663 aa13.48□□□□□ -0.25
AC008938.1-201ENST00000566929 TRIM52Q96A61 297 aa13.47□□□□□ -0.25
AC008938.1-201ENST00000566929 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
AC008938.1-201ENST00000566929 POLR3GLQ9BT43 218 aa13.46□□□□□ -0.25
AC008938.1-201ENST00000566929 BAZ1BQ9UIG0 1483 aaKnown RBP13.45□□□□□ -0.26
AC008938.1-201ENST00000566929 HRCP23327 699 aa13.43□□□□□ -0.26
AC008938.1-201ENST00000566929 BAZ1AQ9NRL2 1556 aaPredicted RBP13.41□□□□□ -0.26
AC008938.1-201ENST00000566929 YTHDC1Q96MU7 727 aaKnown RBP13.39□□□□□ -0.27
AC008938.1-201ENST00000566929 RSF1Q96T23 1441 aaPredicted RBP13.36□□□□□ -0.27
AC008938.1-201ENST00000566929 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
AC008938.1-201ENST00000566929 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
AC008938.1-201ENST00000566929 NPM1P06748 294 aaKnown RBP eCLIP13.33□□□□□ -0.28
AC008938.1-201ENST00000566929 EEA1Q15075 1411 aa13.32□□□□□ -0.28
AC008938.1-201ENST00000566929 MYO15BQ96JP2 1530 aa13.3□□□□□ -0.28
AC008938.1-201ENST00000566929 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
AC008938.1-201ENST00000566929 CHMP7Q8WUX9 453 aaPredicted RBP13.25□□□□□ -0.29
AC008938.1-201ENST00000566929 ZNF777Q9ULD5 760 aaPredicted RBP13.23□□□□□ -0.29
AC008938.1-201ENST00000566929 SMARCA2P51531 1590 aa13.23□□□□□ -0.29
AC008938.1-201ENST00000566929 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
AC008938.1-201ENST00000566929 ARID3CA6NKF2 412 aa13.22□□□□□ -0.29
AC008938.1-201ENST00000566929 WRNQ14191 1432 aaPredicted RBP eCLIP13.21□□□□□ -0.29
AC008938.1-201ENST00000566929 ESF1Q9H501 851 aaKnown RBP13.21□□□□□ -0.3
AC008938.1-201ENST00000566929 GOLGA3Q08378 1498 aa13.2□□□□□ -0.3
AC008938.1-201ENST00000566929 KIF27Q86VH2 1401 aa13.18□□□□□ -0.3
AC008938.1-201ENST00000566929 ZNF326Q5BKZ1 582 aaKnown RBP13.15□□□□□ -0.3
AC008938.1-201ENST00000566929 DIEXFQ68CQ4 756 aaKnown RBP13.14□□□□□ -0.31
AC008938.1-201ENST00000566929 BCANQ96GW7 911 aa13.13□□□□□ -0.31
AC008938.1-201ENST00000566929 CNGB1Q14028 1251 aaPredicted RBP13.13□□□□□ -0.31
AC008938.1-201ENST00000566929 DAXXQ9UER7 740 aaPredicted RBP13.13□□□□□ -0.31
AC008938.1-201ENST00000566929 CLIP1P30622 1438 aa13.12□□□□□ -0.31
AC008938.1-201ENST00000566929 ACIN1Q9UKV3 1341 aaKnown RBP13.12□□□□□ -0.31
AC008938.1-201ENST00000566929 ANP32CO43423 234 aa13.12□□□□□ -0.31
AC008938.1-201ENST00000566929 MTUS2Q5JR59 1369 aa13.11□□□□□ -0.31
AC008938.1-201ENST00000566929 CEP164Q9UPV0 1460 aa13.1□□□□□ -0.31
AC008938.1-201ENST00000566929 CECR2Q9BXF3 1484 aa13.09□□□□□ -0.31
AC008938.1-201ENST00000566929 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
AC008938.1-201ENST00000566929 TSPY4P0CV99 314 aa13.04□□□□□ -0.32
AC008938.1-201ENST00000566929 TSPY10P0CW01 314 aa13.04□□□□□ -0.32
AC008938.1-201ENST00000566929 NEFMP07197 916 aa13.04□□□□□ -0.32
AC008938.1-201ENST00000566929 PDS5BQ9NTI5 1447 aa13.04□□□□□ -0.32
AC008938.1-201ENST00000566929 TOP2AP11388 1531 aaKnown RBP13.04□□□□□ -0.32
AC008938.1-201ENST00000566929 TONSLQ96HA7 1378 aa13.03□□□□□ -0.32
AC008938.1-201ENST00000566929 ZNF316A6NFI3 1004 aaPredicted RBP13.02□□□□□ -0.32
AC008938.1-201ENST00000566929 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
AC008938.1-201ENST00000566929 PLEKHD1A6NEE1 506 aa13□□□□□ -0.33
AC008938.1-201ENST00000566929 TNIKQ9UKE5 1360 aa13□□□□□ -0.33
AC008938.1-201ENST00000566929 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
AC008938.1-201ENST00000566929 CCDC88BA6NC98 1476 aa12.98□□□□□ -0.33
AC008938.1-201ENST00000566929 CHGAP10645 457 aaKnown RBP12.96□□□□□ -0.34
AC008938.1-201ENST00000566929 CUX2O14529 1486 aa12.94□□□□□ -0.34
AC008938.1-201ENST00000566929 SMARCA4P51532 1647 aa12.93□□□□□ -0.34
AC008938.1-201ENST00000566929 FHAD1B1AJZ9 1412 aa12.92□□□□□ -0.34
AC008938.1-201ENST00000566929 CLSPNQ9HAW4 1339 aa12.92□□□□□ -0.34
AC008938.1-201ENST00000566929 ZBTB47Q9UFB7 747 aaPredicted RBP12.91□□□□□ -0.34
AC008938.1-201ENST00000566929 CHIC2Q9UKJ5 165 aa12.91□□□□□ -0.34
AC008938.1-201ENST00000566929 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.91□□□□□ -0.34
AC008938.1-201ENST00000566929 EIF4G1Q04637 1599 aaKnown RBP12.91□□□□□ -0.34
AC008938.1-201ENST00000566929 WIZO95785 1651 aa12.9□□□□□ -0.34
AC008938.1-201ENST00000566929 CARMIL1Q5VZK9 1371 aa12.9□□□□□ -0.35
AC008938.1-201ENST00000566929 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
AC008938.1-201ENST00000566929 CANXP27824 592 aaKnown RBP12.86□□□□□ -0.35
AC008938.1-201ENST00000566929 ATAD2BQ9ULI0 1458 aa12.85□□□□□ -0.35
AC008938.1-201ENST00000566929 SOGA1O94964 1423 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms