RNA–Protein interactions for RNA: ENST00000566627.5

LMF1-209, Transcript of lipase maturation factor 1, humanhuman

TSL 3

Gene LMF1, Length 694 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-209ENST00000566627 NISCHQ9Y2I1 1504 aa40.52■■■■■ 4.08
LMF1-209ENST00000566627 ABCC9O60706 1549 aa36.69■■■■□ 3.46
LMF1-209ENST00000566627 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.39
LMF1-209ENST00000566627 DNAJC5BQ9UF47 199 aa34.7■■■■□ 3.15
LMF1-209ENST00000566627 RB1CC1Q8TDY2 1594 aa34.7■■■■□ 3.14
LMF1-209ENST00000566627 DCAF8L2P0C7V8 631 aa34.57■■■■□ 3.12
LMF1-209ENST00000566627 NACADO15069 1562 aa34.41■■■■□ 3.1
LMF1-209ENST00000566627 PABPN1Q86U42 306 aaKnown RBP eCLIP34.26■■■■□ 3.08
LMF1-209ENST00000566627 UNC13AQ9UPW8 1703 aa33.85■■■■□ 3.01
LMF1-209ENST00000566627 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
LMF1-209ENST00000566627 BICRAQ9NZM4 1560 aa33.72■■■□□ 2.99
LMF1-209ENST00000566627 ZCCHC6Q5VYS8 1495 aaKnown RBP33.5■■■□□ 2.95
LMF1-209ENST00000566627 DCAF1Q9Y4B6 1507 aa33.35■■■□□ 2.93
LMF1-209ENST00000566627 SCRIBQ14160 1630 aa33.19■■■□□ 2.9
LMF1-209ENST00000566627 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
LMF1-209ENST00000566627 CC2D2AQ9P2K1 1620 aa33.05■■■□□ 2.88
LMF1-209ENST00000566627 CECR2Q9BXF3 1484 aa33.03■■■□□ 2.88
LMF1-209ENST00000566627 EIF4G1Q04637 1599 aaKnown RBP32.92■■■□□ 2.86
LMF1-209ENST00000566627 DNAJC5Q9H3Z4 198 aa31.9■■■□□ 2.7
LMF1-209ENST00000566627 NCAPD3P42695 1498 aa31.84■■■□□ 2.69
LMF1-209ENST00000566627 ATAD2BQ9ULI0 1458 aa31.75■■■□□ 2.67
LMF1-209ENST00000566627 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
LMF1-209ENST00000566627 SMARCA4P51532 1647 aa31.6■■■□□ 2.65
LMF1-209ENST00000566627 SMARCA2P51531 1590 aa31.56■■■□□ 2.64
LMF1-209ENST00000566627 CUX2O14529 1486 aa31.56■■■□□ 2.64
LMF1-209ENST00000566627 HMGXB3Q12766 1538 aa31.49■■■□□ 2.63
LMF1-209ENST00000566627 NESP48681 1621 aa31.47■■■□□ 2.63
LMF1-209ENST00000566627 BAZ1AQ9NRL2 1556 aaPredicted RBP31.42■■■□□ 2.62
LMF1-209ENST00000566627 BAZ1BQ9UIG0 1483 aaKnown RBP31.41■■■□□ 2.62
LMF1-209ENST00000566627 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.6
LMF1-209ENST00000566627 PEG3Q9GZU2 1588 aa31.24■■■□□ 2.59
LMF1-209ENST00000566627 LAMC3Q9Y6N6 1575 aa31.08■■■□□ 2.57
LMF1-209ENST00000566627 THOC2Q8NI27 1593 aaKnown RBP31.03■■■□□ 2.56
LMF1-209ENST00000566627 PDS5BQ9NTI5 1447 aa30.99■■■□□ 2.55
LMF1-209ENST00000566627 CADPSQ9ULU8 1353 aa30.92■■■□□ 2.54
LMF1-209ENST00000566627 KIF21AQ7Z4S6 1674 aa30.91■■■□□ 2.54
LMF1-209ENST00000566627 WIZO95785 1651 aa30.85■■■□□ 2.53
LMF1-209ENST00000566627 MRC2Q9UBG0 1479 aa30.7■■■□□ 2.51
LMF1-209ENST00000566627 WDR62O43379 1518 aa30.59■■■□□ 2.49
LMF1-209ENST00000566627 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
LMF1-209ENST00000566627 CEP164Q9UPV0 1460 aa30.55■■■□□ 2.48
LMF1-209ENST00000566627 FANCD2Q9BXW9 1451 aa30.54■■■□□ 2.48
LMF1-209ENST00000566627 TRIM41Q8WV44 630 aa30.53■■■□□ 2.48
LMF1-209ENST00000566627 CFTRP13569 1480 aa30.48■■■□□ 2.47
LMF1-209ENST00000566627 TOP2AP11388 1531 aaKnown RBP30.39■■■□□ 2.46
LMF1-209ENST00000566627 URB2Q14146 1524 aaKnown RBP30.3■■■□□ 2.44
LMF1-209ENST00000566627 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
LMF1-209ENST00000566627 CCDC88BA6NC98 1476 aa30.17■■■□□ 2.42
LMF1-209ENST00000566627 ZNF608Q9ULD9 1512 aaPredicted RBP29.99■■■□□ 2.39
LMF1-209ENST00000566627 PRDM2Q13029 1718 aa29.96■■■□□ 2.39
LMF1-209ENST00000566627 IFT140Q96RY7 1462 aa29.95■■■□□ 2.39
LMF1-209ENST00000566627 TOPBP1Q92547 1522 aa29.93■■■□□ 2.38
LMF1-209ENST00000566627 ABCC8Q09428 1581 aa29.81■■■□□ 2.36
LMF1-209ENST00000566627 RIMBP3CA6NJZ7 1639 aa29.74■■■□□ 2.35
LMF1-209ENST00000566627 RIMBP3BA6NNM3 1639 aa29.74■■■□□ 2.35
LMF1-209ENST00000566627 RIMBP3Q9UFD9 1639 aa29.74■■■□□ 2.35
LMF1-209ENST00000566627 AQRO60306 1485 aaKnown RBP eCLIP29.74■■■□□ 2.35
LMF1-209ENST00000566627 DNMBPQ6XZF7 1577 aa29.74■■■□□ 2.35
LMF1-209ENST00000566627 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
LMF1-209ENST00000566627 FBLN2P98095 1184 aa29.68■■■□□ 2.34
LMF1-209ENST00000566627 ARHGEF11O15085 1522 aa29.66■■■□□ 2.34
LMF1-209ENST00000566627 CYB5RLQ6IPT4 315 aa29.63■■■□□ 2.33
LMF1-209ENST00000566627 TARBP1Q13395 1621 aaKnown RBP29.62■■■□□ 2.33
LMF1-209ENST00000566627 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
LMF1-209ENST00000566627 RAD54L2Q9Y4B4 1467 aa29.6■■■□□ 2.33
LMF1-209ENST00000566627 TDRD9Q8NDG6 1382 aaKnown RBP29.56■■■□□ 2.32
LMF1-209ENST00000566627 SOGA1O94964 1423 aa29.55■■■□□ 2.32
LMF1-209ENST00000566627 CHD1O14646 1710 aa29.49■■■□□ 2.31
LMF1-209ENST00000566627 FGD5Q6ZNL6 1462 aa29.42■■■□□ 2.3
LMF1-209ENST00000566627 ARAP1Q96P48 1450 aa29.37■■■□□ 2.29
LMF1-209ENST00000566627 TRHP20396 242 aaPredicted RBP29.37■■■□□ 2.29
LMF1-209ENST00000566627 CHMP7Q8WUX9 453 aaPredicted RBP29.37■■■□□ 2.29
LMF1-209ENST00000566627 CUX1P39880 1505 aa29.36■■■□□ 2.29
LMF1-209ENST00000566627 SNAPC4Q5SXM2 1469 aa29.36■■■□□ 2.29
LMF1-209ENST00000566627 SUPT5HO00267 1087 aaKnown RBP29.29■■■□□ 2.28
LMF1-209ENST00000566627 GRIN2BQ13224 1484 aa29.23■■■□□ 2.27
LMF1-209ENST00000566627 MAGI1Q96QZ7 1491 aaPredicted RBP29.21■■■□□ 2.27
LMF1-209ENST00000566627 WDR97A6NE52 1622 aa29.2■■■□□ 2.26
LMF1-209ENST00000566627 CLASP1Q7Z460 1538 aa29.17■■■□□ 2.26
LMF1-209ENST00000566627 SYNJ2O15056 1496 aa29.15■■■□□ 2.26
LMF1-209ENST00000566627 SYNJ1O43426 1573 aa29.14■■■□□ 2.26
LMF1-209ENST00000566627 GAPVD1Q14C86 1478 aa29.14■■■□□ 2.26
LMF1-209ENST00000566627 ABCA10Q8WWZ4 1543 aa29.04■■■□□ 2.24
LMF1-209ENST00000566627 PBRM1Q86U86 1689 aa29■■■□□ 2.23
LMF1-209ENST00000566627 ABCA5Q8WWZ7 1642 aa28.94■■■□□ 2.22
LMF1-209ENST00000566627 WRNQ14191 1432 aaPredicted RBP eCLIP28.94■■■□□ 2.22
LMF1-209ENST00000566627 GRIN2AQ12879 1464 aa28.85■■■□□ 2.21
LMF1-209ENST00000566627 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
LMF1-209ENST00000566627 TOP2BQ02880 1626 aa28.78■■■□□ 2.2
LMF1-209ENST00000566627 NUP160Q12769 1436 aa28.77■■■□□ 2.2
LMF1-209ENST00000566627 ADAMTS12P58397 1594 aa28.75■■■□□ 2.19
LMF1-209ENST00000566627 FHAD1B1AJZ9 1412 aa28.75■■■□□ 2.19
LMF1-209ENST00000566627 CEP170Q5SW79 1584 aa28.75■■■□□ 2.19
LMF1-209ENST00000566627 BIVM-ERCC5R4GMW8 1640 aa28.74■■■□□ 2.19
LMF1-209ENST00000566627 ERICH3Q5RHP9 1530 aa28.64■■■□□ 2.18
LMF1-209ENST00000566627 JPH4Q96JJ6 628 aa28.62■■■□□ 2.17
LMF1-209ENST00000566627 AEBP2Q6ZN18 517 aaPredicted RBP28.6■■■□□ 2.17
LMF1-209ENST00000566627 PRG4Q92954 1404 aaPredicted RBP28.58■■■□□ 2.17
LMF1-209ENST00000566627 SHROOM2Q13796 1616 aa28.58■■■□□ 2.17
LMF1-209ENST00000566627 IGF1RP08069 1367 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms