RNA–Protein interactions for RNA: ENST00000566590.5

ABAT-212, Transcript of 4-aminobutyrate aminotransferase, humanhuman

TSL 1 (best)

Gene ABAT, Length 2,423 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABAT-212ENST00000566590 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.04□□□□□ -0.163e-8■■■■■ 41.2
ABAT-212ENST00000566590 PCBP2Q15366 365 aaKnown RBP eCLIP13.71□□□□□ -0.217e-16■■■■■ 37.6
ABAT-212ENST00000566590 HNRNPKP61978 463 aaKnown RBP eCLIP12.86□□□□□ -0.351e-7■■■■□ 25.4
ABAT-212ENST00000566590 HNRNPLP14866 589 aaKnown RBP eCLIP13.96□□□□□ -0.172e-7■■■■□ 24.6
ABAT-212ENST00000566590 DDX3XO00571 662 aaKnown RBP eCLIP15.14■□□□□ 0.018e-10■■■■□ 24.1
ABAT-212ENST00000566590 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.25■□□□□ 0.036e-6■■■■□ 23.7
ABAT-212ENST00000566590 U2AF2P26368 475 aaKnown RBP eCLIP16.13■□□□□ 0.171e-7■■■■□ 19.4
ABAT-212ENST00000566590 PTBP1P26599 531 aaKnown RBP eCLIP12.59□□□□□ -0.392e-7■■■□□ 18.9
ABAT-212ENST00000566590 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.87□□□□□ -0.673e-9■■■□□ 17.8
ABAT-212ENST00000566590 RBFOX2O43251 390 aaKnown RBP eCLIP11.46□□□□□ -0.588e-15■■■□□ 17.3
ABAT-212ENST00000566590 HNRNPUQ00839 825 aaKnown RBP eCLIP19.2■□□□□ 0.664e-9■■■□□ 16.1
ABAT-212ENST00000566590 EFTUD2Q15029 972 aaKnown RBP eCLIP14.49□□□□□ -0.099e-19■■■□□ 15.7
ABAT-212ENST00000566590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.14■□□□□ 0.335e-6■■□□□ 14.4
ABAT-212ENST00000566590 RPS3P23396 243 aaKnown RBP eCLIP13.74□□□□□ -0.212e-6■■□□□ 14.3
ABAT-212ENST00000566590 PPIGQ13427 754 aaKnown RBP eCLIP13.66□□□□□ -0.224e-7■■□□□ 13.7
ABAT-212ENST00000566590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.45■□□□□ 0.73e-6■■□□□ 13.2
ABAT-212ENST00000566590 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.33e-6■■□□□ 12.8
ABAT-212ENST00000566590 RBM22Q9NW64 420 aaKnown RBP eCLIP14.16□□□□□ -0.149e-10■■□□□ 12.6
ABAT-212ENST00000566590 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.07□□□□□ -0.165e-7■■□□□ 11.4
ABAT-212ENST00000566590 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.36□□□□□ -0.273e-7■■□□□ 11.4
ABAT-212ENST00000566590 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.01□□□□□ -0.018e-7■□□□□ 10.6
ABAT-212ENST00000566590 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.35□□□□□ -0.113e-10■□□□□ 9.6
ABAT-212ENST00000566590 PRPF4O43172 522 aaKnown RBP eCLIP14.42□□□□□ -0.11e-6■□□□□ 9.5
ABAT-212ENST00000566590 SRSF1Q07955 248 aaKnown RBP eCLIP10.74□□□□□ -0.692e-6■□□□□ 8.6
Retrieved 24 of 24 RNA–protein pairs in 9.3 ms