RNA–Protein interactions for RNA: ENST00000566568.1

BCKDK-207, Transcript of branched chain ketoacid dehydrogenase kinase, humanhuman

TSL 5

Gene BCKDK, Length 2,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDK-207ENST00000566568 NISCHQ9Y2I1 1504 aa33.16■■■□□ 2.9
BCKDK-207ENST00000566568 SHROOM4Q9ULL8 1493 aa28.57■■■□□ 2.16
BCKDK-207ENST00000566568 SUPT5HO00267 1087 aaKnown RBP28.08■■■□□ 2.09
BCKDK-207ENST00000566568 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
BCKDK-207ENST00000566568 CCDC180Q9P1Z9 1646 aa28.01■■■□□ 2.07
BCKDK-207ENST00000566568 DCAF8L2P0C7V8 631 aa27.66■■■□□ 2.02
BCKDK-207ENST00000566568 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
BCKDK-207ENST00000566568 MYO15BQ96JP2 1530 aa27.24■■□□□ 1.95
BCKDK-207ENST00000566568 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
BCKDK-207ENST00000566568 PELP1Q8IZL8 1130 aaKnown RBP26.78■■□□□ 1.88
BCKDK-207ENST00000566568 HRCP23327 699 aa26.72■■□□□ 1.87
BCKDK-207ENST00000566568 ABCC9O60706 1549 aa26.71■■□□□ 1.87
BCKDK-207ENST00000566568 PCGF6Q9BYE7 350 aa26.68■■□□□ 1.86
BCKDK-207ENST00000566568 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
BCKDK-207ENST00000566568 SCRIBQ14160 1630 aa26.43■■□□□ 1.82
BCKDK-207ENST00000566568 RSF1Q96T23 1441 aaPredicted RBP26.35■■□□□ 1.81
BCKDK-207ENST00000566568 PPARGC1BQ86YN6 1023 aaKnown RBP26.22■■□□□ 1.79
BCKDK-207ENST00000566568 MYT1Q01538 1121 aa26.12■■□□□ 1.77
BCKDK-207ENST00000566568 TRIM41Q8WV44 630 aa26.1■■□□□ 1.77
BCKDK-207ENST00000566568 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
BCKDK-207ENST00000566568 TRIM26Q12899 539 aaPredicted RBP26.06■■□□□ 1.76
BCKDK-207ENST00000566568 NACADO15069 1562 aa25.97■■□□□ 1.75
BCKDK-207ENST00000566568 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
BCKDK-207ENST00000566568 CECR2Q9BXF3 1484 aa25.92■■□□□ 1.74
BCKDK-207ENST00000566568 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
BCKDK-207ENST00000566568 EHMT2Q96KQ7 1210 aa25.81■■□□□ 1.72
BCKDK-207ENST00000566568 WIZO95785 1651 aa25.67■■□□□ 1.7
BCKDK-207ENST00000566568 ZEB1P37275 1124 aaPredicted RBP25.52■■□□□ 1.68
BCKDK-207ENST00000566568 BAZ1AQ9NRL2 1556 aaPredicted RBP25.48■■□□□ 1.67
BCKDK-207ENST00000566568 UNC13AQ9UPW8 1703 aa25.42■■□□□ 1.66
BCKDK-207ENST00000566568 EIF4G1Q04637 1599 aaKnown RBP25.34■■□□□ 1.65
BCKDK-207ENST00000566568 PABPN1Q86U42 306 aaKnown RBP eCLIP25.3■■□□□ 1.64
BCKDK-207ENST00000566568 TOP2AP11388 1531 aaKnown RBP25.24■■□□□ 1.63
BCKDK-207ENST00000566568 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
BCKDK-207ENST00000566568 ABCC8Q09428 1581 aa25.2■■□□□ 1.63
BCKDK-207ENST00000566568 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
BCKDK-207ENST00000566568 BICRAQ9NZM4 1560 aa25.13■■□□□ 1.61
BCKDK-207ENST00000566568 SMARCA2P51531 1590 aa25.12■■□□□ 1.61
BCKDK-207ENST00000566568 SCAF1Q9H7N4 1312 aaKnown RBP25.08■■□□□ 1.61
BCKDK-207ENST00000566568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.07■■□□□ 1.6
BCKDK-207ENST00000566568 SOGA1O94964 1423 aa25.03■■□□□ 1.6
BCKDK-207ENST00000566568 TTBK1Q5TCY1 1321 aaPredicted RBP25.01■■□□□ 1.59
BCKDK-207ENST00000566568 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
BCKDK-207ENST00000566568 CEP162Q5TB80 1403 aa24.97■■□□□ 1.59
BCKDK-207ENST00000566568 WRNQ14191 1432 aaPredicted RBP eCLIP24.92■■□□□ 1.58
BCKDK-207ENST00000566568 CSRNP3Q8WYN3 585 aa24.9■■□□□ 1.58
BCKDK-207ENST00000566568 TNIKQ9UKE5 1360 aa24.89■■□□□ 1.57
BCKDK-207ENST00000566568 RUSC2Q8N2Y8 1516 aa24.88■■□□□ 1.57
BCKDK-207ENST00000566568 UBTFP17480 764 aaKnown RBP24.87■■□□□ 1.57
BCKDK-207ENST00000566568 EEA1Q15075 1411 aa24.83■■□□□ 1.57
BCKDK-207ENST00000566568 GOLGA3Q08378 1498 aa24.72■■□□□ 1.55
BCKDK-207ENST00000566568 PEG3Q9GZU2 1588 aa24.66■■□□□ 1.54
BCKDK-207ENST00000566568 SYNJ1O43426 1573 aa24.6■■□□□ 1.53
BCKDK-207ENST00000566568 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
BCKDK-207ENST00000566568 DIEXFQ68CQ4 756 aaKnown RBP24.56■■□□□ 1.52
BCKDK-207ENST00000566568 CEP164Q9UPV0 1460 aa24.55■■□□□ 1.52
BCKDK-207ENST00000566568 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
BCKDK-207ENST00000566568 CLIP1P30622 1438 aa24.48■■□□□ 1.51
BCKDK-207ENST00000566568 KIF21BO75037 1637 aa24.46■■□□□ 1.51
BCKDK-207ENST00000566568 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
BCKDK-207ENST00000566568 HNRNPUL2Q1KMD3 747 aaKnown RBP24.43■■□□□ 1.5
BCKDK-207ENST00000566568 NEUROD1Q13562 356 aa24.42■■□□□ 1.5
BCKDK-207ENST00000566568 RANGAP1P46060 587 aaPredicted RBP24.42■■□□□ 1.5
BCKDK-207ENST00000566568 RAPGEF2Q9Y4G8 1499 aa24.39■■□□□ 1.5
BCKDK-207ENST00000566568 VPS8Q8N3P4 1428 aa24.36■■□□□ 1.49
BCKDK-207ENST00000566568 APLP2Q06481 763 aa24.33■■□□□ 1.49
BCKDK-207ENST00000566568 ZNF316A6NFI3 1004 aaPredicted RBP24.32■■□□□ 1.48
BCKDK-207ENST00000566568 CENPBP07199 599 aaPredicted RBP24.28■■□□□ 1.48
BCKDK-207ENST00000566568 TOP2BQ02880 1626 aa24.24■■□□□ 1.47
BCKDK-207ENST00000566568 GTF3C3Q9Y5Q9 886 aa24.19■■□□□ 1.46
BCKDK-207ENST00000566568 BIVM-ERCC5R4GMW8 1640 aa24.11■■□□□ 1.45
BCKDK-207ENST00000566568 PRXQ9BXM0 1461 aa24.09■■□□□ 1.45
BCKDK-207ENST00000566568 YTHDC1Q96MU7 727 aaKnown RBP24.07■■□□□ 1.44
BCKDK-207ENST00000566568 CC2D2AQ9P2K1 1620 aa24.05■■□□□ 1.44
BCKDK-207ENST00000566568 ERICH3Q5RHP9 1530 aa24.05■■□□□ 1.44
BCKDK-207ENST00000566568 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
BCKDK-207ENST00000566568 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
BCKDK-207ENST00000566568 MIER1Q8N108 512 aa24.02■■□□□ 1.44
BCKDK-207ENST00000566568 CUX1P39880 1505 aa24.02■■□□□ 1.44
BCKDK-207ENST00000566568 KANK4Q5T7N3 995 aaPredicted RBP24■■□□□ 1.43
BCKDK-207ENST00000566568 HMGXB3Q12766 1538 aa24■■□□□ 1.43
BCKDK-207ENST00000566568 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
BCKDK-207ENST00000566568 CFTRP13569 1480 aa23.9■■□□□ 1.42
BCKDK-207ENST00000566568 DHX57Q6P158 1386 aaKnown RBP23.89■■□□□ 1.42
BCKDK-207ENST00000566568 BCL11AQ9H165 835 aa23.89■■□□□ 1.41
BCKDK-207ENST00000566568 CLSPNQ9HAW4 1339 aa23.84■■□□□ 1.41
BCKDK-207ENST00000566568 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
BCKDK-207ENST00000566568 RRBP1Q9P2E9 1410 aaKnown RBP23.8■■□□□ 1.4
BCKDK-207ENST00000566568 DNAJC5BQ9UF47 199 aa23.76■■□□□ 1.39
BCKDK-207ENST00000566568 ITGAEP38570 1179 aa23.75■■□□□ 1.39
BCKDK-207ENST00000566568 CUX2O14529 1486 aa23.74■■□□□ 1.39
BCKDK-207ENST00000566568 CCNB3Q8WWL7 1395 aa23.74■■□□□ 1.39
BCKDK-207ENST00000566568 IGF1RP08069 1367 aa23.71■■□□□ 1.39
BCKDK-207ENST00000566568 CADPSQ9ULU8 1353 aa23.64■■□□□ 1.37
BCKDK-207ENST00000566568 CARMIL1Q5VZK9 1371 aa23.62■■□□□ 1.37
BCKDK-207ENST00000566568 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
BCKDK-207ENST00000566568 PRKCSHP14314 528 aaPredicted RBP23.57■■□□□ 1.36
BCKDK-207ENST00000566568 PRDM2Q13029 1718 aa23.55■■□□□ 1.36
BCKDK-207ENST00000566568 RAB3GAP2Q9H2M9 1393 aa23.55■■□□□ 1.36
BCKDK-207ENST00000566568 TIAM1Q13009 1591 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 192 ms