RNA–Protein interactions for RNA: ENST00000566496.5

ZC3H18-208, Transcript of zinc finger CCCH-type containing 18, humanhuman

TSL 2

Gene ZC3H18, Length 1,949 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H18-208ENST00000566496 NISCHQ9Y2I1 1504 aa28.67■■■□□ 2.18
ZC3H18-208ENST00000566496 CCDC180Q9P1Z9 1646 aa24.92■■□□□ 1.58
ZC3H18-208ENST00000566496 ABCC9O60706 1549 aa24.15■■□□□ 1.46
ZC3H18-208ENST00000566496 ZCCHC6Q5VYS8 1495 aaKnown RBP24.07■■□□□ 1.44
ZC3H18-208ENST00000566496 DCAF8L2P0C7V8 631 aa23.86■■□□□ 1.41
ZC3H18-208ENST00000566496 DCAF1Q9Y4B6 1507 aa23.63■■□□□ 1.37
ZC3H18-208ENST00000566496 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
ZC3H18-208ENST00000566496 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
ZC3H18-208ENST00000566496 NACADO15069 1562 aa23.25■■□□□ 1.31
ZC3H18-208ENST00000566496 RB1CC1Q8TDY2 1594 aa23.24■■□□□ 1.31
ZC3H18-208ENST00000566496 SCRIBQ14160 1630 aa23.05■■□□□ 1.28
ZC3H18-208ENST00000566496 UNC13AQ9UPW8 1703 aa22.74■■□□□ 1.23
ZC3H18-208ENST00000566496 SUPT5HO00267 1087 aaKnown RBP22.66■■□□□ 1.22
ZC3H18-208ENST00000566496 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.25e-10■■■■□ 21.8
ZC3H18-208ENST00000566496 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
ZC3H18-208ENST00000566496 CECR2Q9BXF3 1484 aa22.32■■□□□ 1.16
ZC3H18-208ENST00000566496 RSF1Q96T23 1441 aaPredicted RBP22.27■■□□□ 1.16
ZC3H18-208ENST00000566496 MROH2BQ7Z745 1585 aa22.18■■□□□ 1.14
ZC3H18-208ENST00000566496 DNAJC5BQ9UF47 199 aa22.18■■□□□ 1.14
ZC3H18-208ENST00000566496 BAZ1AQ9NRL2 1556 aaPredicted RBP22.12■■□□□ 1.13
ZC3H18-208ENST00000566496 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
ZC3H18-208ENST00000566496 WIZO95785 1651 aa22■■□□□ 1.11
ZC3H18-208ENST00000566496 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
ZC3H18-208ENST00000566496 CC2D2AQ9P2K1 1620 aa21.86■■□□□ 1.09
ZC3H18-208ENST00000566496 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
ZC3H18-208ENST00000566496 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
ZC3H18-208ENST00000566496 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
ZC3H18-208ENST00000566496 SMARCA2P51531 1590 aa21.65■■□□□ 1.06
ZC3H18-208ENST00000566496 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
ZC3H18-208ENST00000566496 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
ZC3H18-208ENST00000566496 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
ZC3H18-208ENST00000566496 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
ZC3H18-208ENST00000566496 HMGXB3Q12766 1538 aa21.42■■□□□ 1.02
ZC3H18-208ENST00000566496 TRIM41Q8WV44 630 aa21.27■■□□□ 1
ZC3H18-208ENST00000566496 ABCC8Q09428 1581 aa21.13■□□□□ 0.97
ZC3H18-208ENST00000566496 CFTRP13569 1480 aa21.01■□□□□ 0.95
ZC3H18-208ENST00000566496 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
ZC3H18-208ENST00000566496 CADPSQ9ULU8 1353 aa20.96■□□□□ 0.95
ZC3H18-208ENST00000566496 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.94
ZC3H18-208ENST00000566496 SYNJ1O43426 1573 aa20.88■□□□□ 0.93
ZC3H18-208ENST00000566496 NESP48681 1621 aa20.87■□□□□ 0.93
ZC3H18-208ENST00000566496 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
ZC3H18-208ENST00000566496 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
ZC3H18-208ENST00000566496 ERCC6Q03468 1493 aa20.85■□□□□ 0.93
ZC3H18-208ENST00000566496 PRDM2Q13029 1718 aa20.83■□□□□ 0.93
ZC3H18-208ENST00000566496 TOP2BQ02880 1626 aa20.76■□□□□ 0.91
ZC3H18-208ENST00000566496 SOGA1O94964 1423 aa20.75■□□□□ 0.91
ZC3H18-208ENST00000566496 FANCD2Q9BXW9 1451 aa20.74■□□□□ 0.91
ZC3H18-208ENST00000566496 CUX1P39880 1505 aa20.73■□□□□ 0.91
ZC3H18-208ENST00000566496 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
ZC3H18-208ENST00000566496 BIVM-ERCC5R4GMW8 1640 aa20.71■□□□□ 0.91
ZC3H18-208ENST00000566496 PDS5BQ9NTI5 1447 aa20.71■□□□□ 0.91
ZC3H18-208ENST00000566496 KIF21AQ7Z4S6 1674 aa20.68■□□□□ 0.9
ZC3H18-208ENST00000566496 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
ZC3H18-208ENST00000566496 CUX2O14529 1486 aa20.63■□□□□ 0.89
ZC3H18-208ENST00000566496 EEA1Q15075 1411 aa20.62■□□□□ 0.89
ZC3H18-208ENST00000566496 CEP164Q9UPV0 1460 aa20.6■□□□□ 0.89
ZC3H18-208ENST00000566496 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
ZC3H18-208ENST00000566496 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
ZC3H18-208ENST00000566496 DNMBPQ6XZF7 1577 aa20.52■□□□□ 0.88
ZC3H18-208ENST00000566496 FGD5Q6ZNL6 1462 aa20.52■□□□□ 0.88
ZC3H18-208ENST00000566496 TOPBP1Q92547 1522 aa20.51■□□□□ 0.87
ZC3H18-208ENST00000566496 MRC2Q9UBG0 1479 aa20.49■□□□□ 0.87
ZC3H18-208ENST00000566496 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
ZC3H18-208ENST00000566496 KIF27Q86VH2 1401 aa20.44■□□□□ 0.86
ZC3H18-208ENST00000566496 WDR62O43379 1518 aa20.41■□□□□ 0.86
ZC3H18-208ENST00000566496 POLA1P09884 1462 aaPredicted RBP20.4■□□□□ 0.86
ZC3H18-208ENST00000566496 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
ZC3H18-208ENST00000566496 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
ZC3H18-208ENST00000566496 UBTFP17480 764 aaKnown RBP20.38■□□□□ 0.85
ZC3H18-208ENST00000566496 KIF21BO75037 1637 aa20.36■□□□□ 0.85
ZC3H18-208ENST00000566496 TNIKQ9UKE5 1360 aa20.31■□□□□ 0.84
ZC3H18-208ENST00000566496 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
ZC3H18-208ENST00000566496 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
ZC3H18-208ENST00000566496 PRXQ9BXM0 1461 aa20.27■□□□□ 0.84
ZC3H18-208ENST00000566496 IGF1RP08069 1367 aa20.26■□□□□ 0.83
ZC3H18-208ENST00000566496 CEP162Q5TB80 1403 aa20.24■□□□□ 0.83
ZC3H18-208ENST00000566496 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
ZC3H18-208ENST00000566496 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
ZC3H18-208ENST00000566496 TDRD9Q8NDG6 1382 aaKnown RBP20.2■□□□□ 0.82
ZC3H18-208ENST00000566496 TARBP1Q13395 1621 aaKnown RBP20.16■□□□□ 0.82
ZC3H18-208ENST00000566496 CARMIL1Q5VZK9 1371 aa20.16■□□□□ 0.82
ZC3H18-208ENST00000566496 RANGAP1P46060 587 aaPredicted RBP20.14■□□□□ 0.81
ZC3H18-208ENST00000566496 GAPVD1Q14C86 1478 aa20.12■□□□□ 0.81
ZC3H18-208ENST00000566496 ABCA5Q8WWZ7 1642 aa20.12■□□□□ 0.81
ZC3H18-208ENST00000566496 IFT140Q96RY7 1462 aa20.1■□□□□ 0.81
ZC3H18-208ENST00000566496 CLIP1P30622 1438 aa20.08■□□□□ 0.81
ZC3H18-208ENST00000566496 AQRO60306 1485 aaKnown RBP eCLIP20.06■□□□□ 0.82e-7■■■■■ 36.7
ZC3H18-208ENST00000566496 DNAJC5Q9H3Z4 198 aa20.06■□□□□ 0.8
ZC3H18-208ENST00000566496 CUL7Q14999 1698 aa20.05■□□□□ 0.8
ZC3H18-208ENST00000566496 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
ZC3H18-208ENST00000566496 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
ZC3H18-208ENST00000566496 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
ZC3H18-208ENST00000566496 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
ZC3H18-208ENST00000566496 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
ZC3H18-208ENST00000566496 EIF4G3O43432 1585 aaKnown RBP19.92■□□□□ 0.78
ZC3H18-208ENST00000566496 PCGF6Q9BYE7 350 aa19.92■□□□□ 0.78
ZC3H18-208ENST00000566496 FHAD1B1AJZ9 1412 aa19.89■□□□□ 0.78
ZC3H18-208ENST00000566496 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
ZC3H18-208ENST00000566496 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms