RNA–Protein interactions for RNA: ENST00000566047.5

CMC2-215, Transcript of C-X9-C motif containing 2, humanhuman

TSL 2

Gene CMC2, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-215ENST00000566047 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
CMC2-215ENST00000566047 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
CMC2-215ENST00000566047 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
CMC2-215ENST00000566047 PHF23Q9BUL5 403 aaPredicted RBP18.26■□□□□ 0.51
CMC2-215ENST00000566047 FOXD1Q16676 465 aa17.11■□□□□ 0.33
CMC2-215ENST00000566047 PLPPR3Q6T4P5 718 aa16.73■□□□□ 0.27
CMC2-215ENST00000566047 PPP6R1Q9UPN7 881 aa16.22■□□□□ 0.19
CMC2-215ENST00000566047 ADRA2BP18089 450 aa16.18■□□□□ 0.18
CMC2-215ENST00000566047 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
CMC2-215ENST00000566047 MSH5O43196 834 aa15.88■□□□□ 0.13
CMC2-215ENST00000566047 POTEDQ86YR6 584 aa15.64■□□□□ 0.09
CMC2-215ENST00000566047 MAPK8IP2Q13387 824 aaPredicted RBP14.77□□□□□ -0.05
CMC2-215ENST00000566047 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
CMC2-215ENST00000566047 PPP4R3CPQ6ZMV5 832 aa14.7□□□□□ -0.06
CMC2-215ENST00000566047 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
CMC2-215ENST00000566047 CNKSR2Q8WXI2 1034 aa14.36□□□□□ -0.11
CMC2-215ENST00000566047 HOXD11P31277 338 aaPredicted RBP14.2□□□□□ -0.14
CMC2-215ENST00000566047 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
CMC2-215ENST00000566047 RNF216Q9NWF9 866 aaPredicted RBP14.16□□□□□ -0.14
CMC2-215ENST00000566047 NPM3O75607 178 aaKnown RBP14.03□□□□□ -0.16
CMC2-215ENST00000566047 KCNA4P22459 653 aa14.01□□□□□ -0.17
CMC2-215ENST00000566047 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
CMC2-215ENST00000566047 DNAJC5BQ9UF47 199 aa13.68□□□□□ -0.22
CMC2-215ENST00000566047 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
CMC2-215ENST00000566047 CACNB1Q02641 598 aaPredicted RBP13.58□□□□□ -0.24
CMC2-215ENST00000566047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.5□□□□□ -0.253e-7■□□□□ 9.5
CMC2-215ENST00000566047 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
CMC2-215ENST00000566047 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
CMC2-215ENST00000566047 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
CMC2-215ENST00000566047 SLC4A1APQ9BWU0 796 aaKnown RBP13.27□□□□□ -0.29
CMC2-215ENST00000566047 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
CMC2-215ENST00000566047 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
CMC2-215ENST00000566047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
CMC2-215ENST00000566047 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
CMC2-215ENST00000566047 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
CMC2-215ENST00000566047 CAPN15O75808 1086 aa12.94□□□□□ -0.34
CMC2-215ENST00000566047 SAMD1Q6SPF0 538 aaPredicted RBP12.92□□□□□ -0.34
CMC2-215ENST00000566047 ZBTB22O15209 634 aa12.91□□□□□ -0.34
CMC2-215ENST00000566047 APLP2Q06481 763 aa12.9□□□□□ -0.34
CMC2-215ENST00000566047 DSG3P32926 999 aa12.82□□□□□ -0.36
CMC2-215ENST00000566047 TRHP20396 242 aaPredicted RBP12.8□□□□□ -0.36
CMC2-215ENST00000566047 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
CMC2-215ENST00000566047 ABCB7O75027 752 aa12.68□□□□□ -0.38
CMC2-215ENST00000566047 ATF5Q9Y2D1 282 aaPredicted RBP12.66□□□□□ -0.38
CMC2-215ENST00000566047 ATXN8OSP0DMR3 200 aa12.54□□□□□ -0.4
CMC2-215ENST00000566047 CSRNP3Q8WYN3 585 aa12.54□□□□□ -0.4
CMC2-215ENST00000566047 POLA2Q14181 598 aa12.53□□□□□ -0.4
CMC2-215ENST00000566047 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
CMC2-215ENST00000566047 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
CMC2-215ENST00000566047 POTEHQ6S545 545 aa12.24□□□□□ -0.45
CMC2-215ENST00000566047 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
CMC2-215ENST00000566047 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
CMC2-215ENST00000566047 FBLN2P98095 1184 aa12.1□□□□□ -0.47
CMC2-215ENST00000566047 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
CMC2-215ENST00000566047 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
CMC2-215ENST00000566047 SPDYE2BA6NHP3 402 aa11.95□□□□□ -0.5
CMC2-215ENST00000566047 SPDYE6P0CI01 402 aa11.95□□□□□ -0.5
CMC2-215ENST00000566047 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
CMC2-215ENST00000566047 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
CMC2-215ENST00000566047 CHRDL2Q6WN34 429 aa11.85□□□□□ -0.51
CMC2-215ENST00000566047 ZNF692Q9BU19 519 aaPredicted RBP11.84□□□□□ -0.51
CMC2-215ENST00000566047 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
CMC2-215ENST00000566047 PITPNM1O00562 1244 aa11.77□□□□□ -0.53
CMC2-215ENST00000566047 PABPN1Q86U42 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
CMC2-215ENST00000566047 SPDYE1Q8NFV5 336 aaPredicted RBP11.66□□□□□ -0.54
CMC2-215ENST00000566047 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
CMC2-215ENST00000566047 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
CMC2-215ENST00000566047 CLEC11AQ9Y240 323 aa11.62□□□□□ -0.55
CMC2-215ENST00000566047 FXR2P51116 673 aaKnown RBP eCLIP11.6□□□□□ -0.55
CMC2-215ENST00000566047 PRR29P0C7W0 189 aa11.47□□□□□ -0.57
CMC2-215ENST00000566047 PRKAR2AP13861 404 aaKnown RBP11.45□□□□□ -0.58
CMC2-215ENST00000566047 PROM2Q8N271 834 aa11.43□□□□□ -0.58
CMC2-215ENST00000566047 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
CMC2-215ENST00000566047 CHADLQ6NUI6 762 aa11.39□□□□□ -0.59
CMC2-215ENST00000566047 SP7Q8TDD2 431 aaPredicted RBP11.38□□□□□ -0.59
CMC2-215ENST00000566047 FKBP8Q14318 412 aa11.34□□□□□ -0.59
CMC2-215ENST00000566047 HAX1O00165 279 aa11.31□□□□□ -0.6
CMC2-215ENST00000566047 CREBZFQ9NS37 354 aa11.28□□□□□ -0.6
CMC2-215ENST00000566047 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
CMC2-215ENST00000566047 EVX2Q03828 476 aa11.23□□□□□ -0.61
CMC2-215ENST00000566047 C19orf67A6NJJ6 358 aa11.22□□□□□ -0.61
CMC2-215ENST00000566047 MNX1P50219 401 aaPredicted RBP11.14□□□□□ -0.63
CMC2-215ENST00000566047 CD44P16070 742 aaKnown RBP11.11□□□□□ -0.63
CMC2-215ENST00000566047 MIER1Q8N108 512 aa11.05□□□□□ -0.64
CMC2-215ENST00000566047 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
CMC2-215ENST00000566047 FBXO3Q9UK99 471 aa11.01□□□□□ -0.65
CMC2-215ENST00000566047 PLEKHG5O94827 1062 aa11□□□□□ -0.65
CMC2-215ENST00000566047 PLCD3Q8N3E9 789 aa11□□□□□ -0.65
CMC2-215ENST00000566047 ZRANB1Q9UGI0 708 aa10.99□□□□□ -0.65
CMC2-215ENST00000566047 GABBR2O75899 941 aa10.98□□□□□ -0.65
CMC2-215ENST00000566047 ZNF579Q8NAF0 562 aaKnown RBP10.96□□□□□ -0.65
CMC2-215ENST00000566047 PAK3O75914 559 aaPredicted RBP10.94□□□□□ -0.66
CMC2-215ENST00000566047 ZBTB47Q9UFB7 747 aaPredicted RBP10.9□□□□□ -0.66
CMC2-215ENST00000566047 VASPP50552 380 aaPredicted RBP10.89□□□□□ -0.67
CMC2-215ENST00000566047 CLCN6P51797 869 aa10.88□□□□□ -0.67
CMC2-215ENST00000566047 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
CMC2-215ENST00000566047 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
CMC2-215ENST00000566047 TSPYL2Q9H2G4 693 aaPredicted RBP10.86□□□□□ -0.67
CMC2-215ENST00000566047 NUBP1P53384 320 aa10.83□□□□□ -0.68
CMC2-215ENST00000566047 CCDC61Q9Y6R9 512 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms