RNA–Protein interactions for RNA: ENST00000566021.1

PARN-214, Transcript of poly(A)-specific ribonuclease, humanhuman

TSL 3

Gene PARN, Length 598 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARN-214ENST00000566021 NISCHQ9Y2I1 1504 aa49.8■■■■■ 5.56
PARN-214ENST00000566021 ABCC9O60706 1549 aa46.07■■■■■ 4.97
PARN-214ENST00000566021 CCDC180Q9P1Z9 1646 aa45.17■■■■■ 4.82
PARN-214ENST00000566021 DNAJC5BQ9UF47 199 aa44.05■■■■■ 4.64
PARN-214ENST00000566021 RB1CC1Q8TDY2 1594 aa43.49■■■■■ 4.55
PARN-214ENST00000566021 NACADO15069 1562 aa42.95■■■■■ 4.47
PARN-214ENST00000566021 PABPN1Q86U42 306 aaKnown RBP eCLIP42.72■■■■■ 4.43
PARN-214ENST00000566021 DCAF8L2P0C7V8 631 aa42.49■■■■■ 4.39
PARN-214ENST00000566021 UNC13AQ9UPW8 1703 aa42.44■■■■■ 4.38
PARN-214ENST00000566021 BICRAQ9NZM4 1560 aa42.17■■■■■ 4.34
PARN-214ENST00000566021 MYO15BQ96JP2 1530 aa42.03■■■■■ 4.32
PARN-214ENST00000566021 CECR2Q9BXF3 1484 aa41.64■■■■■ 4.26
PARN-214ENST00000566021 SHROOM4Q9ULL8 1493 aa41.62■■■■■ 4.25
PARN-214ENST00000566021 CC2D2AQ9P2K1 1620 aa41.58■■■■■ 4.25
PARN-214ENST00000566021 DNAJC5Q9H3Z4 198 aa41.28■■■■■ 4.2
PARN-214ENST00000566021 EIF4G1Q04637 1599 aaKnown RBP41.25■■■■■ 4.19
PARN-214ENST00000566021 DCAF1Q9Y4B6 1507 aa41.12■■■■■ 4.17
PARN-214ENST00000566021 ZCCHC6Q5VYS8 1495 aaKnown RBP41.04■■■■■ 4.16
PARN-214ENST00000566021 SCRIBQ14160 1630 aa41.03■■■■■ 4.16
PARN-214ENST00000566021 CUX2O14529 1486 aa40.19■■■■■ 4.02
PARN-214ENST00000566021 ERCC6Q03468 1493 aa39.92■■■■□ 3.98
PARN-214ENST00000566021 NCAPD3P42695 1498 aa39.63■■■■□ 3.94
PARN-214ENST00000566021 ATAD2BQ9ULI0 1458 aa39.35■■■■□ 3.89
PARN-214ENST00000566021 NESP48681 1621 aa39.26■■■■□ 3.88
PARN-214ENST00000566021 HMGXB3Q12766 1538 aa39.25■■■■□ 3.87
PARN-214ENST00000566021 SMARCA2P51531 1590 aa39.25■■■■□ 3.87
PARN-214ENST00000566021 THOC2Q8NI27 1593 aaKnown RBP39.09■■■■□ 3.85
PARN-214ENST00000566021 SMARCA4P51532 1647 aa39.06■■■■□ 3.84
PARN-214ENST00000566021 TRIM41Q8WV44 630 aa39.04■■■■□ 3.84
PARN-214ENST00000566021 BAZ1BQ9UIG0 1483 aaKnown RBP38.94■■■■□ 3.82
PARN-214ENST00000566021 LAMC3Q9Y6N6 1575 aa38.92■■■■□ 3.82
PARN-214ENST00000566021 KIF21AQ7Z4S6 1674 aa38.77■■■■□ 3.8
PARN-214ENST00000566021 BAZ1AQ9NRL2 1556 aaPredicted RBP38.76■■■■□ 3.8
PARN-214ENST00000566021 PDS5BQ9NTI5 1447 aa38.75■■■■□ 3.79
PARN-214ENST00000566021 PEG3Q9GZU2 1588 aa38.71■■■■□ 3.79
PARN-214ENST00000566021 MRC2Q9UBG0 1479 aa38.44■■■■□ 3.74
PARN-214ENST00000566021 CADPSQ9ULU8 1353 aa38.38■■■■□ 3.73
PARN-214ENST00000566021 WDR62O43379 1518 aa38.37■■■■□ 3.73
PARN-214ENST00000566021 MROH2BQ7Z745 1585 aa38.32■■■■□ 3.73
PARN-214ENST00000566021 OSCARQ8IYS5 282 aa38.21■■■■□ 3.71
PARN-214ENST00000566021 CEP164Q9UPV0 1460 aa38.09■■■■□ 3.69
PARN-214ENST00000566021 FANCD2Q9BXW9 1451 aa37.95■■■■□ 3.67
PARN-214ENST00000566021 WIZO95785 1651 aa37.82■■■■□ 3.65
PARN-214ENST00000566021 RIMBP3CA6NJZ7 1639 aa37.75■■■■□ 3.63
PARN-214ENST00000566021 RIMBP3BA6NNM3 1639 aa37.75■■■■□ 3.63
PARN-214ENST00000566021 RIMBP3Q9UFD9 1639 aa37.75■■■■□ 3.63
PARN-214ENST00000566021 CFTRP13569 1480 aa37.73■■■■□ 3.63
PARN-214ENST00000566021 URB2Q14146 1524 aaKnown RBP37.66■■■■□ 3.62
PARN-214ENST00000566021 ARHGEF11O15085 1522 aa37.53■■■■□ 3.6
PARN-214ENST00000566021 IFT140Q96RY7 1462 aa37.38■■■■□ 3.57
PARN-214ENST00000566021 CYB5RLQ6IPT4 315 aa37.34■■■■□ 3.57
PARN-214ENST00000566021 ZNF608Q9ULD9 1512 aaPredicted RBP37.34■■■■□ 3.57
PARN-214ENST00000566021 TOP2AP11388 1531 aaKnown RBP37.31■■■■□ 3.56
PARN-214ENST00000566021 PRDM2Q13029 1718 aa37.31■■■■□ 3.56
PARN-214ENST00000566021 TRHP20396 242 aaPredicted RBP37.28■■■■□ 3.56
PARN-214ENST00000566021 RSF1Q96T23 1441 aaPredicted RBP37.19■■■■□ 3.54
PARN-214ENST00000566021 EIF4G3O43432 1585 aaKnown RBP37.12■■■■□ 3.53
PARN-214ENST00000566021 TOPBP1Q92547 1522 aa37.1■■■■□ 3.53
PARN-214ENST00000566021 ARAP1Q96P48 1450 aa37.07■■■■□ 3.52
PARN-214ENST00000566021 CHD1O14646 1710 aa37.05■■■■□ 3.52
PARN-214ENST00000566021 ABCC8Q09428 1581 aa37.04■■■■□ 3.52
PARN-214ENST00000566021 AEBP2Q6ZN18 517 aaPredicted RBP36.98■■■■□ 3.51
PARN-214ENST00000566021 FBLN2P98095 1184 aa36.91■■■■□ 3.5
PARN-214ENST00000566021 AQRO60306 1485 aaKnown RBP eCLIP36.9■■■■□ 3.52e-11■■■■■ 44.9
PARN-214ENST00000566021 DNMBPQ6XZF7 1577 aa36.9■■■■□ 3.5
PARN-214ENST00000566021 CCDC88BA6NC98 1476 aa36.88■■■■□ 3.49
PARN-214ENST00000566021 TARBP1Q13395 1621 aaKnown RBP36.84■■■■□ 3.49
PARN-214ENST00000566021 POLA1P09884 1462 aaPredicted RBP36.65■■■■□ 3.46
PARN-214ENST00000566021 CLASP1Q7Z460 1538 aa36.58■■■■□ 3.45
PARN-214ENST00000566021 SYNJ1O43426 1573 aa36.53■■■■□ 3.44
PARN-214ENST00000566021 TDRD9Q8NDG6 1382 aaKnown RBP36.53■■■■□ 3.44
PARN-214ENST00000566021 RAD54L2Q9Y4B4 1467 aa36.51■■■■□ 3.44
PARN-214ENST00000566021 SNAPC4Q5SXM2 1469 aa36.5■■■■□ 3.43
PARN-214ENST00000566021 CHMP7Q8WUX9 453 aaPredicted RBP36.5■■■■□ 3.43
PARN-214ENST00000566021 SOGA1O94964 1423 aa36.5■■■■□ 3.43
PARN-214ENST00000566021 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
PARN-214ENST00000566021 MAGI1Q96QZ7 1491 aaPredicted RBP36.42■■■■□ 3.42
PARN-214ENST00000566021 SYNJ2O15056 1496 aa36.31■■■■□ 3.4
PARN-214ENST00000566021 GRIN2BQ13224 1484 aa36.31■■■■□ 3.4
PARN-214ENST00000566021 GAPVD1Q14C86 1478 aa36.29■■■■□ 3.4
PARN-214ENST00000566021 FGD5Q6ZNL6 1462 aa36.28■■■■□ 3.4
PARN-214ENST00000566021 PBRM1Q86U86 1689 aa36.07■■■■□ 3.37
PARN-214ENST00000566021 CUX1P39880 1505 aa36.07■■■■□ 3.36
PARN-214ENST00000566021 ERCC6L2Q5T890 1561 aa35.88■■■■□ 3.33
PARN-214ENST00000566021 ABCA5Q8WWZ7 1642 aa35.85■■■■□ 3.33
PARN-214ENST00000566021 ABCA10Q8WWZ4 1543 aa35.83■■■■□ 3.33
PARN-214ENST00000566021 GRIN2AQ12879 1464 aa35.82■■■■□ 3.32
PARN-214ENST00000566021 CEP170Q5SW79 1584 aa35.81■■■■□ 3.32
PARN-214ENST00000566021 KIF13AQ9H1H9 1805 aa35.77■■■■□ 3.32
PARN-214ENST00000566021 NUP160Q12769 1436 aa35.73■■■■□ 3.31
PARN-214ENST00000566021 SHROOM2Q13796 1616 aa35.69■■■■□ 3.3
PARN-214ENST00000566021 ADAMTS12P58397 1594 aa35.65■■■■□ 3.3
PARN-214ENST00000566021 FHAD1B1AJZ9 1412 aa35.55■■■■□ 3.28
PARN-214ENST00000566021 WRNQ14191 1432 aaPredicted RBP eCLIP35.53■■■■□ 3.28
PARN-214ENST00000566021 FAM69CQ0P6D2 419 aa35.51■■■■□ 3.28
PARN-214ENST00000566021 PRG4Q92954 1404 aaPredicted RBP35.49■■■■□ 3.27
PARN-214ENST00000566021 ABCC10Q5T3U5 1492 aa35.48■■■■□ 3.27
PARN-214ENST00000566021 NPM1P06748 294 aaKnown RBP eCLIP35.44■■■■□ 3.26
PARN-214ENST00000566021 ERICH3Q5RHP9 1530 aa35.39■■■■□ 3.26
PARN-214ENST00000566021 JPH4Q96JJ6 628 aa35.39■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms