RNA–Protein interactions for RNA: ENST00000565904.1

AC009063.3-201, humanhuman

TSL 3 BASIC

Gene AC009063.3, Length 566 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009063.3-201ENST00000565904 NISCHQ9Y2I1 1504 aa27.26■■□□□ 1.96
AC009063.3-201ENST00000565904 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
AC009063.3-201ENST00000565904 ABCC9O60706 1549 aa23.79■■□□□ 1.4
AC009063.3-201ENST00000565904 RB1CC1Q8TDY2 1594 aa22.87■■□□□ 1.25
AC009063.3-201ENST00000565904 NACADO15069 1562 aa22.84■■□□□ 1.25
AC009063.3-201ENST00000565904 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
AC009063.3-201ENST00000565904 MYO15BQ96JP2 1530 aa22.72■■□□□ 1.23
AC009063.3-201ENST00000565904 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
AC009063.3-201ENST00000565904 DCAF1Q9Y4B6 1507 aa22.58■■□□□ 1.21
AC009063.3-201ENST00000565904 UNC13AQ9UPW8 1703 aa22.28■■□□□ 1.16
AC009063.3-201ENST00000565904 PABPN1Q86U42 306 aaKnown RBP eCLIP22.24■■□□□ 1.15
AC009063.3-201ENST00000565904 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
AC009063.3-201ENST00000565904 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
AC009063.3-201ENST00000565904 SHROOM4Q9ULL8 1493 aa21.98■■□□□ 1.11
AC009063.3-201ENST00000565904 DNAJC5BQ9UF47 199 aa21.94■■□□□ 1.1
AC009063.3-201ENST00000565904 EIF4G1Q04637 1599 aaKnown RBP21.6■■□□□ 1.05
AC009063.3-201ENST00000565904 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
AC009063.3-201ENST00000565904 CECR2Q9BXF3 1484 aa21.4■■□□□ 1.02
AC009063.3-201ENST00000565904 SMARCA4P51532 1647 aa21.15■□□□□ 0.98
AC009063.3-201ENST00000565904 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.97
AC009063.3-201ENST00000565904 NCAPD3P42695 1498 aa21.11■□□□□ 0.97
AC009063.3-201ENST00000565904 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.97
AC009063.3-201ENST00000565904 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
AC009063.3-201ENST00000565904 MROH2BQ7Z745 1585 aa20.99■□□□□ 0.95
AC009063.3-201ENST00000565904 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
AC009063.3-201ENST00000565904 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
AC009063.3-201ENST00000565904 BAZ1BQ9UIG0 1483 aaKnown RBP20.89■□□□□ 0.94
AC009063.3-201ENST00000565904 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
AC009063.3-201ENST00000565904 WIZO95785 1651 aa20.73■□□□□ 0.91
AC009063.3-201ENST00000565904 NESP48681 1621 aa20.56■□□□□ 0.88
AC009063.3-201ENST00000565904 TOP2AP11388 1531 aaKnown RBP20.53■□□□□ 0.88
AC009063.3-201ENST00000565904 LAMC3Q9Y6N6 1575 aa20.52■□□□□ 0.88
AC009063.3-201ENST00000565904 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
AC009063.3-201ENST00000565904 CADPSQ9ULU8 1353 aa20.48■□□□□ 0.87
AC009063.3-201ENST00000565904 PDS5BQ9NTI5 1447 aa20.42■□□□□ 0.86
AC009063.3-201ENST00000565904 CUX2O14529 1486 aa20.35■□□□□ 0.85
AC009063.3-201ENST00000565904 CFTRP13569 1480 aa20.34■□□□□ 0.85
AC009063.3-201ENST00000565904 CCDC88BA6NC98 1476 aa20.31■□□□□ 0.84
AC009063.3-201ENST00000565904 KIF21AQ7Z4S6 1674 aa20.28■□□□□ 0.84
AC009063.3-201ENST00000565904 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
AC009063.3-201ENST00000565904 FANCD2Q9BXW9 1451 aa20.22■□□□□ 0.83
AC009063.3-201ENST00000565904 CEP164Q9UPV0 1460 aa20.19■□□□□ 0.82
AC009063.3-201ENST00000565904 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
AC009063.3-201ENST00000565904 SUPT5HO00267 1087 aaKnown RBP20.15■□□□□ 0.82
AC009063.3-201ENST00000565904 WDR62O43379 1518 aa20.12■□□□□ 0.81
AC009063.3-201ENST00000565904 PRDM2Q13029 1718 aa20.07■□□□□ 0.8
AC009063.3-201ENST00000565904 URB2Q14146 1524 aaKnown RBP20.01■□□□□ 0.79
AC009063.3-201ENST00000565904 ABCC8Q09428 1581 aa19.91■□□□□ 0.78
AC009063.3-201ENST00000565904 TOPBP1Q92547 1522 aa19.87■□□□□ 0.77
AC009063.3-201ENST00000565904 DNAJC5Q9H3Z4 198 aa19.85■□□□□ 0.77
AC009063.3-201ENST00000565904 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
AC009063.3-201ENST00000565904 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
AC009063.3-201ENST00000565904 POLA1P09884 1462 aaPredicted RBP19.71■□□□□ 0.75
AC009063.3-201ENST00000565904 CUX1P39880 1505 aa19.7■□□□□ 0.74
AC009063.3-201ENST00000565904 ZNF608Q9ULD9 1512 aaPredicted RBP19.69■□□□□ 0.74
AC009063.3-201ENST00000565904 TARBP1Q13395 1621 aaKnown RBP19.66■□□□□ 0.74
AC009063.3-201ENST00000565904 SOGA1O94964 1423 aa19.65■□□□□ 0.74
AC009063.3-201ENST00000565904 FGD5Q6ZNL6 1462 aa19.64■□□□□ 0.73
AC009063.3-201ENST00000565904 RAD54L2Q9Y4B4 1467 aa19.61■□□□□ 0.73
AC009063.3-201ENST00000565904 EIF4G3O43432 1585 aaKnown RBP19.58■□□□□ 0.73
AC009063.3-201ENST00000565904 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.72
AC009063.3-201ENST00000565904 WRNQ14191 1432 aaPredicted RBP eCLIP19.56■□□□□ 0.72
AC009063.3-201ENST00000565904 TDRD9Q8NDG6 1382 aaKnown RBP19.54■□□□□ 0.72
AC009063.3-201ENST00000565904 OSCARQ8IYS5 282 aa19.53■□□□□ 0.72
AC009063.3-201ENST00000565904 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
AC009063.3-201ENST00000565904 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
AC009063.3-201ENST00000565904 BIVM-ERCC5R4GMW8 1640 aa19.49■□□□□ 0.71
AC009063.3-201ENST00000565904 SYNJ1O43426 1573 aa19.49■□□□□ 0.71
AC009063.3-201ENST00000565904 ABCA10Q8WWZ4 1543 aa19.47■□□□□ 0.71
AC009063.3-201ENST00000565904 GRIN2BQ13224 1484 aa19.42■□□□□ 0.7
AC009063.3-201ENST00000565904 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
AC009063.3-201ENST00000565904 SNAPC4Q5SXM2 1469 aa19.38■□□□□ 0.69
AC009063.3-201ENST00000565904 MAGI1Q96QZ7 1491 aaPredicted RBP19.38■□□□□ 0.69
AC009063.3-201ENST00000565904 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
AC009063.3-201ENST00000565904 FBLN2P98095 1184 aa19.35■□□□□ 0.69
AC009063.3-201ENST00000565904 CHMP7Q8WUX9 453 aaPredicted RBP19.32■□□□□ 0.68
AC009063.3-201ENST00000565904 CHD1O14646 1710 aa19.31■□□□□ 0.68
AC009063.3-201ENST00000565904 PBRM1Q86U86 1689 aa19.3■□□□□ 0.68
AC009063.3-201ENST00000565904 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
AC009063.3-201ENST00000565904 ERICH3Q5RHP9 1530 aa19.23■□□□□ 0.67
AC009063.3-201ENST00000565904 FHAD1B1AJZ9 1412 aa19.19■□□□□ 0.66
AC009063.3-201ENST00000565904 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
AC009063.3-201ENST00000565904 KIF27Q86VH2 1401 aa19.17■□□□□ 0.66
AC009063.3-201ENST00000565904 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
AC009063.3-201ENST00000565904 ARHGEF11O15085 1522 aa19.16■□□□□ 0.66
AC009063.3-201ENST00000565904 CLASP1Q7Z460 1538 aa19.16■□□□□ 0.66
AC009063.3-201ENST00000565904 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.66
AC009063.3-201ENST00000565904 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.66
AC009063.3-201ENST00000565904 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.66
AC009063.3-201ENST00000565904 IGF1RP08069 1367 aa19.12■□□□□ 0.65
AC009063.3-201ENST00000565904 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
AC009063.3-201ENST00000565904 NUP160Q12769 1436 aa19.09■□□□□ 0.65
AC009063.3-201ENST00000565904 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
AC009063.3-201ENST00000565904 CUL7Q14999 1698 aa19.01■□□□□ 0.63
AC009063.3-201ENST00000565904 CYB5RLQ6IPT4 315 aa19.01■□□□□ 0.63
AC009063.3-201ENST00000565904 ARAP1Q96P48 1450 aa19■□□□□ 0.63
AC009063.3-201ENST00000565904 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
AC009063.3-201ENST00000565904 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
AC009063.3-201ENST00000565904 SHROOM2Q13796 1616 aa18.93■□□□□ 0.62
AC009063.3-201ENST00000565904 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms