RNA–Protein interactions for RNA: ENST00000565589.5

RNPS1-215, Transcript of RNA binding protein with serine rich domain 1, humanhuman

TSL 2

Gene RNPS1, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPS1-215ENST00000565589 NISCHQ9Y2I1 1504 aa20.85■□□□□ 0.93
RNPS1-215ENST00000565589 ABCC9O60706 1549 aa18.72■□□□□ 0.59
RNPS1-215ENST00000565589 CCDC180Q9P1Z9 1646 aa18.7■□□□□ 0.58
RNPS1-215ENST00000565589 RB1CC1Q8TDY2 1594 aa17.9■□□□□ 0.46
RNPS1-215ENST00000565589 NACADO15069 1562 aa17.8■□□□□ 0.44
RNPS1-215ENST00000565589 DCAF8L2P0C7V8 631 aa17.67■□□□□ 0.42
RNPS1-215ENST00000565589 DNAJC5BQ9UF47 199 aa17.63■□□□□ 0.41
RNPS1-215ENST00000565589 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
RNPS1-215ENST00000565589 PABPN1Q86U42 306 aaKnown RBP eCLIP17.46■□□□□ 0.39
RNPS1-215ENST00000565589 DCAF1Q9Y4B6 1507 aa17.32■□□□□ 0.36
RNPS1-215ENST00000565589 SHROOM4Q9ULL8 1493 aa17.28■□□□□ 0.36
RNPS1-215ENST00000565589 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
RNPS1-215ENST00000565589 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
RNPS1-215ENST00000565589 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.35
RNPS1-215ENST00000565589 CECR2Q9BXF3 1484 aa16.96■□□□□ 0.31
RNPS1-215ENST00000565589 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
RNPS1-215ENST00000565589 CC2D2AQ9P2K1 1620 aa16.9■□□□□ 0.3
RNPS1-215ENST00000565589 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
RNPS1-215ENST00000565589 NCAPD3P42695 1498 aa16.47■□□□□ 0.23
RNPS1-215ENST00000565589 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
RNPS1-215ENST00000565589 ATAD2BQ9ULI0 1458 aa16.33■□□□□ 0.2
RNPS1-215ENST00000565589 CUX2O14529 1486 aa16.32■□□□□ 0.2
RNPS1-215ENST00000565589 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
RNPS1-215ENST00000565589 HMGXB3Q12766 1538 aa16.27■□□□□ 0.2
RNPS1-215ENST00000565589 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
RNPS1-215ENST00000565589 BAZ1AQ9NRL2 1556 aaPredicted RBP16.22■□□□□ 0.19
RNPS1-215ENST00000565589 SMARCA4P51532 1647 aa16.2■□□□□ 0.18
RNPS1-215ENST00000565589 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
RNPS1-215ENST00000565589 PEG3Q9GZU2 1588 aa16.14■□□□□ 0.17
RNPS1-215ENST00000565589 PDS5BQ9NTI5 1447 aa16.06■□□□□ 0.16
RNPS1-215ENST00000565589 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
RNPS1-215ENST00000565589 NESP48681 1621 aa16.01■□□□□ 0.15
RNPS1-215ENST00000565589 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
RNPS1-215ENST00000565589 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
RNPS1-215ENST00000565589 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
RNPS1-215ENST00000565589 MRC2Q9UBG0 1479 aa15.81■□□□□ 0.12
RNPS1-215ENST00000565589 WDR62O43379 1518 aa15.73■□□□□ 0.11
RNPS1-215ENST00000565589 KIF21AQ7Z4S6 1674 aa15.73■□□□□ 0.11
RNPS1-215ENST00000565589 CFTRP13569 1480 aa15.73■□□□□ 0.11
RNPS1-215ENST00000565589 CEP164Q9UPV0 1460 aa15.73■□□□□ 0.11
RNPS1-215ENST00000565589 WIZO95785 1651 aa15.72■□□□□ 0.11
RNPS1-215ENST00000565589 RSF1Q96T23 1441 aaPredicted RBP15.71■□□□□ 0.11
RNPS1-215ENST00000565589 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
RNPS1-215ENST00000565589 OSCARQ8IYS5 282 aa15.65■□□□□ 0.1
RNPS1-215ENST00000565589 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
RNPS1-215ENST00000565589 TRIM41Q8WV44 630 aa15.55■□□□□ 0.08
RNPS1-215ENST00000565589 ABCC8Q09428 1581 aa15.51■□□□□ 0.07
RNPS1-215ENST00000565589 URB2Q14146 1524 aaKnown RBP15.5■□□□□ 0.07
RNPS1-215ENST00000565589 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
RNPS1-215ENST00000565589 IFT140Q96RY7 1462 aa15.47■□□□□ 0.07
RNPS1-215ENST00000565589 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
RNPS1-215ENST00000565589 PRDM2Q13029 1718 aa15.36■□□□□ 0.05
RNPS1-215ENST00000565589 DNMBPQ6XZF7 1577 aa15.31■□□□□ 0.04
RNPS1-215ENST00000565589 ZNF608Q9ULD9 1512 aaPredicted RBP15.3■□□□□ 0.04
RNPS1-215ENST00000565589 SOGA1O94964 1423 aa15.22■□□□□ 0.03
RNPS1-215ENST00000565589 AQRO60306 1485 aaKnown RBP eCLIP15.21■□□□□ 0.031e-6■■■■■ 33.8
RNPS1-215ENST00000565589 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
RNPS1-215ENST00000565589 FBLN2P98095 1184 aa15.2■□□□□ 0.02
RNPS1-215ENST00000565589 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
RNPS1-215ENST00000565589 RIMBP3CA6NJZ7 1639 aa15.19■□□□□ 0.02
RNPS1-215ENST00000565589 RIMBP3BA6NNM3 1639 aa15.19■□□□□ 0.02
RNPS1-215ENST00000565589 RIMBP3Q9UFD9 1639 aa15.19■□□□□ 0.02
RNPS1-215ENST00000565589 CYB5RLQ6IPT4 315 aa15.19■□□□□ 0.02
RNPS1-215ENST00000565589 EIF4G3O43432 1585 aaKnown RBP15.19■□□□□ 0.02
RNPS1-215ENST00000565589 WDR97A6NE52 1622 aa15.18■□□□□ 0.02
RNPS1-215ENST00000565589 TARBP1Q13395 1621 aaKnown RBP15.17■□□□□ 0.02
RNPS1-215ENST00000565589 CHMP7Q8WUX9 453 aaPredicted RBP15.16■□□□□ 0.02
RNPS1-215ENST00000565589 TDRD9Q8NDG6 1382 aaKnown RBP15.14■□□□□ 0.01
RNPS1-215ENST00000565589 MAGI1Q96QZ7 1491 aaPredicted RBP15.1■□□□□ 0.01
RNPS1-215ENST00000565589 RAD54L2Q9Y4B4 1467 aa15.1■□□□□ 0.01
RNPS1-215ENST00000565589 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
RNPS1-215ENST00000565589 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0.01
RNPS1-215ENST00000565589 TRHP20396 242 aaPredicted RBP15.06■□□□□ 0
RNPS1-215ENST00000565589 SYNJ2O15056 1496 aa15.04■□□□□ -0
RNPS1-215ENST00000565589 SNAPC4Q5SXM2 1469 aa15.04■□□□□ -0
RNPS1-215ENST00000565589 SYNJ1O43426 1573 aa15.02■□□□□ -0
RNPS1-215ENST00000565589 CUX1P39880 1505 aa15.02■□□□□ -0
RNPS1-215ENST00000565589 ARAP1Q96P48 1450 aa15.02■□□□□ -0
RNPS1-215ENST00000565589 CHD1O14646 1710 aa15.01□□□□□ -0.01
RNPS1-215ENST00000565589 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
RNPS1-215ENST00000565589 ABCA10Q8WWZ4 1543 aa14.98□□□□□ -0.01
RNPS1-215ENST00000565589 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
RNPS1-215ENST00000565589 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
RNPS1-215ENST00000565589 CLASP1Q7Z460 1538 aa14.97□□□□□ -0.01
RNPS1-215ENST00000565589 SUPT5HO00267 1087 aaKnown RBP14.96□□□□□ -0.01
RNPS1-215ENST00000565589 FHAD1B1AJZ9 1412 aa14.85□□□□□ -0.03
RNPS1-215ENST00000565589 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
RNPS1-215ENST00000565589 GRIN2AQ12879 1464 aa14.84□□□□□ -0.03
RNPS1-215ENST00000565589 NUP160Q12769 1436 aa14.83□□□□□ -0.04
RNPS1-215ENST00000565589 PBRM1Q86U86 1689 aa14.81□□□□□ -0.04
RNPS1-215ENST00000565589 ERICH3Q5RHP9 1530 aa14.81□□□□□ -0.04
RNPS1-215ENST00000565589 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
RNPS1-215ENST00000565589 JPH4Q96JJ6 628 aa14.76□□□□□ -0.05
RNPS1-215ENST00000565589 BIVM-ERCC5R4GMW8 1640 aa14.76□□□□□ -0.05
RNPS1-215ENST00000565589 ADAMTS12P58397 1594 aa14.74□□□□□ -0.05
RNPS1-215ENST00000565589 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
RNPS1-215ENST00000565589 CEP170Q5SW79 1584 aa14.71□□□□□ -0.05
RNPS1-215ENST00000565589 PRG4Q92954 1404 aaPredicted RBP14.68□□□□□ -0.06
RNPS1-215ENST00000565589 SHROOM2Q13796 1616 aa14.67□□□□□ -0.06
RNPS1-215ENST00000565589 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms