RNA–Protein interactions for RNA: ENST00000565139.1

AC009041.2-202, humanhuman

TSL 3

Gene AC009041.2, Length 384 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-202ENST00000565139 NISCHQ9Y2I1 1504 aa25.24■■□□□ 1.63
AC009041.2-202ENST00000565139 ABCC9O60706 1549 aa22.77■■□□□ 1.24
AC009041.2-202ENST00000565139 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.21
AC009041.2-202ENST00000565139 RB1CC1Q8TDY2 1594 aa21.61■■□□□ 1.05
AC009041.2-202ENST00000565139 DNAJC5BQ9UF47 199 aa21.57■■□□□ 1.04
AC009041.2-202ENST00000565139 NACADO15069 1562 aa21.47■■□□□ 1.03
AC009041.2-202ENST00000565139 DCAF8L2P0C7V8 631 aa21.29■■□□□ 1
AC009041.2-202ENST00000565139 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
AC009041.2-202ENST00000565139 MYO15BQ96JP2 1530 aa21.2■□□□□ 0.98
AC009041.2-202ENST00000565139 UNC13AQ9UPW8 1703 aa21.07■□□□□ 0.96
AC009041.2-202ENST00000565139 BICRAQ9NZM4 1560 aa21.05■□□□□ 0.96
AC009041.2-202ENST00000565139 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
AC009041.2-202ENST00000565139 DCAF1Q9Y4B6 1507 aa20.87■□□□□ 0.93
AC009041.2-202ENST00000565139 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
AC009041.2-202ENST00000565139 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
AC009041.2-202ENST00000565139 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
AC009041.2-202ENST00000565139 CECR2Q9BXF3 1484 aa20.54■□□□□ 0.88
AC009041.2-202ENST00000565139 EIF4G1Q04637 1599 aaKnown RBP20.51■□□□□ 0.87
AC009041.2-202ENST00000565139 DNAJC5Q9H3Z4 198 aa19.89■□□□□ 0.77
AC009041.2-202ENST00000565139 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
AC009041.2-202ENST00000565139 ATAD2BQ9ULI0 1458 aa19.77■□□□□ 0.76
AC009041.2-202ENST00000565139 CUX2O14529 1486 aa19.71■□□□□ 0.75
AC009041.2-202ENST00000565139 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
AC009041.2-202ENST00000565139 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
AC009041.2-202ENST00000565139 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
AC009041.2-202ENST00000565139 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
AC009041.2-202ENST00000565139 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
AC009041.2-202ENST00000565139 NESP48681 1621 aa19.54■□□□□ 0.72
AC009041.2-202ENST00000565139 PEG3Q9GZU2 1588 aa19.53■□□□□ 0.72
AC009041.2-202ENST00000565139 BAZ1BQ9UIG0 1483 aaKnown RBP19.53■□□□□ 0.72
AC009041.2-202ENST00000565139 MROH2BQ7Z745 1585 aa19.44■□□□□ 0.7
AC009041.2-202ENST00000565139 LAMC3Q9Y6N6 1575 aa19.38■□□□□ 0.69
AC009041.2-202ENST00000565139 THOC2Q8NI27 1593 aaKnown RBP19.35■□□□□ 0.69
AC009041.2-202ENST00000565139 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
AC009041.2-202ENST00000565139 CADPSQ9ULU8 1353 aa19.25■□□□□ 0.67
AC009041.2-202ENST00000565139 KIF21AQ7Z4S6 1674 aa19.21■□□□□ 0.67
AC009041.2-202ENST00000565139 WIZO95785 1651 aa19.14■□□□□ 0.66
AC009041.2-202ENST00000565139 MRC2Q9UBG0 1479 aa19.11■□□□□ 0.65
AC009041.2-202ENST00000565139 WDR62O43379 1518 aa19.08■□□□□ 0.64
AC009041.2-202ENST00000565139 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
AC009041.2-202ENST00000565139 CFTRP13569 1480 aa19.01■□□□□ 0.63
AC009041.2-202ENST00000565139 CEP164Q9UPV0 1460 aa19■□□□□ 0.63
AC009041.2-202ENST00000565139 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
AC009041.2-202ENST00000565139 TOP2AP11388 1531 aaKnown RBP18.92■□□□□ 0.62
AC009041.2-202ENST00000565139 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
AC009041.2-202ENST00000565139 TRIM41Q8WV44 630 aa18.85■□□□□ 0.61
AC009041.2-202ENST00000565139 OSCARQ8IYS5 282 aa18.81■□□□□ 0.6
AC009041.2-202ENST00000565139 CCDC88BA6NC98 1476 aa18.75■□□□□ 0.59
AC009041.2-202ENST00000565139 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
AC009041.2-202ENST00000565139 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
AC009041.2-202ENST00000565139 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.58
AC009041.2-202ENST00000565139 TOPBP1Q92547 1522 aa18.62■□□□□ 0.57
AC009041.2-202ENST00000565139 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
AC009041.2-202ENST00000565139 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
AC009041.2-202ENST00000565139 RIMBP3CA6NJZ7 1639 aa18.51■□□□□ 0.55
AC009041.2-202ENST00000565139 RIMBP3BA6NNM3 1639 aa18.51■□□□□ 0.55
AC009041.2-202ENST00000565139 RIMBP3Q9UFD9 1639 aa18.51■□□□□ 0.55
AC009041.2-202ENST00000565139 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
AC009041.2-202ENST00000565139 TARBP1Q13395 1621 aaKnown RBP18.47■□□□□ 0.55
AC009041.2-202ENST00000565139 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.55
AC009041.2-202ENST00000565139 ARHGEF11O15085 1522 aa18.46■□□□□ 0.55
AC009041.2-202ENST00000565139 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
AC009041.2-202ENST00000565139 RAD54L2Q9Y4B4 1467 aa18.36■□□□□ 0.53
AC009041.2-202ENST00000565139 SOGA1O94964 1423 aa18.35■□□□□ 0.53
AC009041.2-202ENST00000565139 CYB5RLQ6IPT4 315 aa18.35■□□□□ 0.53
AC009041.2-202ENST00000565139 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.53
AC009041.2-202ENST00000565139 CHD1O14646 1710 aa18.32■□□□□ 0.52
AC009041.2-202ENST00000565139 FBLN2P98095 1184 aa18.31■□□□□ 0.52
AC009041.2-202ENST00000565139 ARAP1Q96P48 1450 aa18.28■□□□□ 0.52
AC009041.2-202ENST00000565139 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
AC009041.2-202ENST00000565139 CUX1P39880 1505 aa18.26■□□□□ 0.51
AC009041.2-202ENST00000565139 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
AC009041.2-202ENST00000565139 SNAPC4Q5SXM2 1469 aa18.24■□□□□ 0.51
AC009041.2-202ENST00000565139 MAGI1Q96QZ7 1491 aaPredicted RBP18.2■□□□□ 0.5
AC009041.2-202ENST00000565139 CLASP1Q7Z460 1538 aa18.2■□□□□ 0.5
AC009041.2-202ENST00000565139 CHMP7Q8WUX9 453 aaPredicted RBP18.2■□□□□ 0.5
AC009041.2-202ENST00000565139 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
AC009041.2-202ENST00000565139 SYNJ2O15056 1496 aa18.15■□□□□ 0.5
AC009041.2-202ENST00000565139 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
AC009041.2-202ENST00000565139 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
AC009041.2-202ENST00000565139 GAPVD1Q14C86 1478 aa18.12■□□□□ 0.49
AC009041.2-202ENST00000565139 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
AC009041.2-202ENST00000565139 ABCA5Q8WWZ7 1642 aa18.05■□□□□ 0.48
AC009041.2-202ENST00000565139 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
AC009041.2-202ENST00000565139 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
AC009041.2-202ENST00000565139 WRNQ14191 1432 aaPredicted RBP eCLIP17.99■□□□□ 0.47
AC009041.2-202ENST00000565139 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
AC009041.2-202ENST00000565139 NUP160Q12769 1436 aa17.94■□□□□ 0.46
AC009041.2-202ENST00000565139 TOP2BQ02880 1626 aa17.92■□□□□ 0.46
AC009041.2-202ENST00000565139 BIVM-ERCC5R4GMW8 1640 aa17.9■□□□□ 0.46
AC009041.2-202ENST00000565139 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
AC009041.2-202ENST00000565139 FHAD1B1AJZ9 1412 aa17.89■□□□□ 0.46
AC009041.2-202ENST00000565139 ERCC6L2Q5T890 1561 aa17.89■□□□□ 0.45
AC009041.2-202ENST00000565139 CEP170Q5SW79 1584 aa17.88■□□□□ 0.45
AC009041.2-202ENST00000565139 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
AC009041.2-202ENST00000565139 SHROOM2Q13796 1616 aa17.83■□□□□ 0.45
AC009041.2-202ENST00000565139 JPH4Q96JJ6 628 aa17.76■□□□□ 0.43
AC009041.2-202ENST00000565139 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
AC009041.2-202ENST00000565139 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
AC009041.2-202ENST00000565139 IGF1RP08069 1367 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms