RNA–Protein interactions for RNA: ENST00000565012.1

TUFM-203, Transcript of Tu translation elongation factor, mitochondrial, humanhuman

TSL 5

Gene TUFM, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUFM-203ENST00000565012 NISCHQ9Y2I1 1504 aa42.3■■■■■ 4.36
TUFM-203ENST00000565012 CCDC180Q9P1Z9 1646 aa37.65■■■■□ 3.62
TUFM-203ENST00000565012 ABCC9O60706 1549 aa36.96■■■■□ 3.51
TUFM-203ENST00000565012 RB1CC1Q8TDY2 1594 aa35.51■■■■□ 3.27
TUFM-203ENST00000565012 NACADO15069 1562 aa35.43■■■■□ 3.26
TUFM-203ENST00000565012 DCAF8L2P0C7V8 631 aa35.4■■■■□ 3.26
TUFM-203ENST00000565012 ZCCHC6Q5VYS8 1495 aaKnown RBP35.22■■■■□ 3.23
TUFM-203ENST00000565012 MYO15BQ96JP2 1530 aa35.19■■■■□ 3.22
TUFM-203ENST00000565012 DCAF1Q9Y4B6 1507 aa35■■■■□ 3.19
TUFM-203ENST00000565012 UNC13AQ9UPW8 1703 aa34.68■■■■□ 3.14
TUFM-203ENST00000565012 PABPN1Q86U42 306 aaKnown RBP eCLIP34.52■■■■□ 3.128e-12■■■□□ 16.7
TUFM-203ENST00000565012 BICRAQ9NZM4 1560 aa34.43■■■■□ 3.1
TUFM-203ENST00000565012 SCRIBQ14160 1630 aa34.36■■■■□ 3.09
TUFM-203ENST00000565012 SHROOM4Q9ULL8 1493 aa34.07■■■■□ 3.04
TUFM-203ENST00000565012 DNAJC5BQ9UF47 199 aa34.01■■■■□ 3.03
TUFM-203ENST00000565012 EIF4G1Q04637 1599 aaKnown RBP33.54■■■□□ 2.96
TUFM-203ENST00000565012 CC2D2AQ9P2K1 1620 aa33.42■■■□□ 2.94
TUFM-203ENST00000565012 CECR2Q9BXF3 1484 aa33.23■■■□□ 2.91
TUFM-203ENST00000565012 SMARCA4P51532 1647 aa32.85■■■□□ 2.85
TUFM-203ENST00000565012 BAZ1AQ9NRL2 1556 aaPredicted RBP32.8■■■□□ 2.84
TUFM-203ENST00000565012 NCAPD3P42695 1498 aa32.7■■■□□ 2.83
TUFM-203ENST00000565012 ATAD2BQ9ULI0 1458 aa32.7■■■□□ 2.83
TUFM-203ENST00000565012 SMARCA2P51531 1590 aa32.66■■■□□ 2.82
TUFM-203ENST00000565012 MROH2BQ7Z745 1585 aa32.61■■■□□ 2.81
TUFM-203ENST00000565012 HMGXB3Q12766 1538 aa32.53■■■□□ 2.8
TUFM-203ENST00000565012 PEG3Q9GZU2 1588 aa32.53■■■□□ 2.8
TUFM-203ENST00000565012 BAZ1BQ9UIG0 1483 aaKnown RBP32.43■■■□□ 2.78
TUFM-203ENST00000565012 WIZO95785 1651 aa32.24■■■□□ 2.75
TUFM-203ENST00000565012 RSF1Q96T23 1441 aaPredicted RBP32.2■■■□□ 2.75
TUFM-203ENST00000565012 NESP48681 1621 aa31.96■■■□□ 2.71
TUFM-203ENST00000565012 TOP2AP11388 1531 aaKnown RBP31.9■■■□□ 2.7
TUFM-203ENST00000565012 ERCC6Q03468 1493 aa31.87■■■□□ 2.69
TUFM-203ENST00000565012 LAMC3Q9Y6N6 1575 aa31.85■■■□□ 2.69
TUFM-203ENST00000565012 CADPSQ9ULU8 1353 aa31.74■■■□□ 2.67
TUFM-203ENST00000565012 PDS5BQ9NTI5 1447 aa31.65■■■□□ 2.66
TUFM-203ENST00000565012 CUX2O14529 1486 aa31.57■■■□□ 2.64
TUFM-203ENST00000565012 KIF21AQ7Z4S6 1674 aa31.56■■■□□ 2.64
TUFM-203ENST00000565012 CFTRP13569 1480 aa31.53■■■□□ 2.64
TUFM-203ENST00000565012 CCDC88BA6NC98 1476 aa31.52■■■□□ 2.64
TUFM-203ENST00000565012 THOC2Q8NI27 1593 aaKnown RBP31.49■■■□□ 2.63
TUFM-203ENST00000565012 FANCD2Q9BXW9 1451 aa31.39■■■□□ 2.62
TUFM-203ENST00000565012 CEP164Q9UPV0 1460 aa31.35■■■□□ 2.61
TUFM-203ENST00000565012 MRC2Q9UBG0 1479 aa31.33■■■□□ 2.61
TUFM-203ENST00000565012 SUPT5HO00267 1087 aaKnown RBP31.31■■■□□ 2.6
TUFM-203ENST00000565012 PRDM2Q13029 1718 aa31.27■■■□□ 2.6
TUFM-203ENST00000565012 WDR62O43379 1518 aa31.23■■■□□ 2.59
TUFM-203ENST00000565012 URB2Q14146 1524 aaKnown RBP31.08■■■□□ 2.57
TUFM-203ENST00000565012 TOPBP1Q92547 1522 aa30.88■■■□□ 2.53
TUFM-203ENST00000565012 ABCC8Q09428 1581 aa30.85■■■□□ 2.53
TUFM-203ENST00000565012 DNMBPQ6XZF7 1577 aa30.82■■■□□ 2.52
TUFM-203ENST00000565012 DNAJC5Q9H3Z4 198 aa30.72■■■□□ 2.51
TUFM-203ENST00000565012 IFT140Q96RY7 1462 aa30.7■■■□□ 2.51
TUFM-203ENST00000565012 POLA1P09884 1462 aaPredicted RBP30.6■■■□□ 2.49
TUFM-203ENST00000565012 CUX1P39880 1505 aa30.59■■■□□ 2.49
TUFM-203ENST00000565012 ZNF608Q9ULD9 1512 aaPredicted RBP30.57■■■□□ 2.49
TUFM-203ENST00000565012 TARBP1Q13395 1621 aaKnown RBP30.53■■■□□ 2.48
TUFM-203ENST00000565012 FGD5Q6ZNL6 1462 aa30.51■■■□□ 2.48
TUFM-203ENST00000565012 SOGA1O94964 1423 aa30.47■■■□□ 2.47
TUFM-203ENST00000565012 RAD54L2Q9Y4B4 1467 aa30.47■■■□□ 2.47
TUFM-203ENST00000565012 EIF4G3O43432 1585 aaKnown RBP30.45■■■□□ 2.47
TUFM-203ENST00000565012 AQRO60306 1485 aaKnown RBP eCLIP30.39■■■□□ 2.466e-8■■■■■ 42.9
TUFM-203ENST00000565012 WRNQ14191 1432 aaPredicted RBP eCLIP30.37■■■□□ 2.45
TUFM-203ENST00000565012 TDRD9Q8NDG6 1382 aaKnown RBP30.32■■■□□ 2.44
TUFM-203ENST00000565012 TOP2BQ02880 1626 aa30.3■■■□□ 2.44
TUFM-203ENST00000565012 BIVM-ERCC5R4GMW8 1640 aa30.29■■■□□ 2.44
TUFM-203ENST00000565012 SYNJ1O43426 1573 aa30.29■■■□□ 2.44
TUFM-203ENST00000565012 WDR97A6NE52 1622 aa30.29■■■□□ 2.44
TUFM-203ENST00000565012 OSCARQ8IYS5 282 aa30.24■■■□□ 2.43
TUFM-203ENST00000565012 ABCA10Q8WWZ4 1543 aa30.21■■■□□ 2.43
TUFM-203ENST00000565012 GRIN2BQ13224 1484 aa30.13■■■□□ 2.41
TUFM-203ENST00000565012 GAPVD1Q14C86 1478 aa30.12■■■□□ 2.41
TUFM-203ENST00000565012 SNAPC4Q5SXM2 1469 aa30.11■■■□□ 2.41
TUFM-203ENST00000565012 ABCA5Q8WWZ7 1642 aa30.1■■■□□ 2.41
TUFM-203ENST00000565012 CHD1O14646 1710 aa30.08■■■□□ 2.41
TUFM-203ENST00000565012 MAGI1Q96QZ7 1491 aaPredicted RBP30.06■■■□□ 2.4
TUFM-203ENST00000565012 PBRM1Q86U86 1689 aa30.05■■■□□ 2.4
TUFM-203ENST00000565012 FBLN2P98095 1184 aa30.05■■■□□ 2.4
TUFM-203ENST00000565012 SYNJ2O15056 1496 aa29.95■■■□□ 2.39
TUFM-203ENST00000565012 CHMP7Q8WUX9 453 aaPredicted RBP29.95■■■□□ 2.39
TUFM-203ENST00000565012 ERICH3Q5RHP9 1530 aa29.85■■■□□ 2.37
TUFM-203ENST00000565012 ADAMTS12P58397 1594 aa29.82■■■□□ 2.36
TUFM-203ENST00000565012 RIMBP3CA6NJZ7 1639 aa29.77■■■□□ 2.36
TUFM-203ENST00000565012 RIMBP3BA6NNM3 1639 aa29.77■■■□□ 2.36
TUFM-203ENST00000565012 RIMBP3Q9UFD9 1639 aa29.77■■■□□ 2.36
TUFM-203ENST00000565012 FHAD1B1AJZ9 1412 aa29.77■■■□□ 2.36
TUFM-203ENST00000565012 ARHGEF11O15085 1522 aa29.76■■■□□ 2.35
TUFM-203ENST00000565012 CLASP1Q7Z460 1538 aa29.76■■■□□ 2.35
TUFM-203ENST00000565012 GRIN2AQ12879 1464 aa29.74■■■□□ 2.35
TUFM-203ENST00000565012 KIF27Q86VH2 1401 aa29.73■■■□□ 2.35
TUFM-203ENST00000565012 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
TUFM-203ENST00000565012 IGF1RP08069 1367 aa29.63■■■□□ 2.33
TUFM-203ENST00000565012 NUP160Q12769 1436 aa29.62■■■□□ 2.33
TUFM-203ENST00000565012 CEP170Q5SW79 1584 aa29.6■■■□□ 2.33
TUFM-203ENST00000565012 CUL7Q14999 1698 aa29.55■■■□□ 2.32
TUFM-203ENST00000565012 ARAP1Q96P48 1450 aa29.51■■■□□ 2.31
TUFM-203ENST00000565012 CYB5RLQ6IPT4 315 aa29.48■■■□□ 2.31
TUFM-203ENST00000565012 CARMIL1Q5VZK9 1371 aa29.45■■■□□ 2.31
TUFM-203ENST00000565012 RUSC2Q8N2Y8 1516 aa29.44■■■□□ 2.3
TUFM-203ENST00000565012 SHROOM2Q13796 1616 aa29.4■■■□□ 2.3
TUFM-203ENST00000565012 ERCC6L2Q5T890 1561 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms