RNA–Protein interactions for RNA: ENST00000564743.1

AC009088.2-201, humanhuman

TSL 5 BASIC

Gene AC009088.2, Length 463 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.2-201ENST00000564743 NISCHQ9Y2I1 1504 aa35.96■■■■□ 3.35
AC009088.2-201ENST00000564743 CCDC180Q9P1Z9 1646 aa32.14■■■□□ 2.74
AC009088.2-201ENST00000564743 ABCC9O60706 1549 aa31.98■■■□□ 2.71
AC009088.2-201ENST00000564743 RB1CC1Q8TDY2 1594 aa30.53■■■□□ 2.48
AC009088.2-201ENST00000564743 NACADO15069 1562 aa30.37■■■□□ 2.45
AC009088.2-201ENST00000564743 DCAF8L2P0C7V8 631 aa30.35■■■□□ 2.45
AC009088.2-201ENST00000564743 MYO15BQ96JP2 1530 aa30.01■■■□□ 2.39
AC009088.2-201ENST00000564743 ZCCHC6Q5VYS8 1495 aaKnown RBP29.85■■■□□ 2.37
AC009088.2-201ENST00000564743 PABPN1Q86U42 306 aaKnown RBP eCLIP29.83■■■□□ 2.37
AC009088.2-201ENST00000564743 DNAJC5BQ9UF47 199 aa29.75■■■□□ 2.35
AC009088.2-201ENST00000564743 UNC13AQ9UPW8 1703 aa29.73■■■□□ 2.35
AC009088.2-201ENST00000564743 DCAF1Q9Y4B6 1507 aa29.71■■■□□ 2.35
AC009088.2-201ENST00000564743 BICRAQ9NZM4 1560 aa29.57■■■□□ 2.32
AC009088.2-201ENST00000564743 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
AC009088.2-201ENST00000564743 SHROOM4Q9ULL8 1493 aa29.25■■■□□ 2.27
AC009088.2-201ENST00000564743 EIF4G1Q04637 1599 aaKnown RBP28.87■■■□□ 2.21
AC009088.2-201ENST00000564743 CC2D2AQ9P2K1 1620 aa28.86■■■□□ 2.21
AC009088.2-201ENST00000564743 CECR2Q9BXF3 1484 aa28.78■■■□□ 2.2
AC009088.2-201ENST00000564743 NCAPD3P42695 1498 aa28.03■■■□□ 2.08
AC009088.2-201ENST00000564743 SMARCA4P51532 1647 aa27.99■■■□□ 2.07
AC009088.2-201ENST00000564743 ATAD2BQ9ULI0 1458 aa27.98■■■□□ 2.07
AC009088.2-201ENST00000564743 SMARCA2P51531 1590 aa27.93■■■□□ 2.06
AC009088.2-201ENST00000564743 BAZ1AQ9NRL2 1556 aaPredicted RBP27.91■■■□□ 2.06
AC009088.2-201ENST00000564743 HMGXB3Q12766 1538 aa27.84■■■□□ 2.05
AC009088.2-201ENST00000564743 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
AC009088.2-201ENST00000564743 MROH2BQ7Z745 1585 aa27.7■■■□□ 2.03
AC009088.2-201ENST00000564743 PEG3Q9GZU2 1588 aa27.7■■■□□ 2.03
AC009088.2-201ENST00000564743 ERCC6Q03468 1493 aa27.64■■■□□ 2.01
AC009088.2-201ENST00000564743 NESP48681 1621 aa27.51■■□□□ 1.99
AC009088.2-201ENST00000564743 CUX2O14529 1486 aa27.46■■□□□ 1.99
AC009088.2-201ENST00000564743 WIZO95785 1651 aa27.36■■□□□ 1.97
AC009088.2-201ENST00000564743 LAMC3Q9Y6N6 1575 aa27.36■■□□□ 1.97
AC009088.2-201ENST00000564743 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
AC009088.2-201ENST00000564743 RSF1Q96T23 1441 aaPredicted RBP27.23■■□□□ 1.95
AC009088.2-201ENST00000564743 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
AC009088.2-201ENST00000564743 DNAJC5Q9H3Z4 198 aa27.18■■□□□ 1.94
AC009088.2-201ENST00000564743 THOC2Q8NI27 1593 aaKnown RBP27.16■■□□□ 1.94
AC009088.2-201ENST00000564743 KIF21AQ7Z4S6 1674 aa27.12■■□□□ 1.93
AC009088.2-201ENST00000564743 TOP2AP11388 1531 aaKnown RBP27.07■■□□□ 1.92
AC009088.2-201ENST00000564743 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
AC009088.2-201ENST00000564743 CFTRP13569 1480 aa26.93■■□□□ 1.9
AC009088.2-201ENST00000564743 CEP164Q9UPV0 1460 aa26.92■■□□□ 1.9
AC009088.2-201ENST00000564743 FANCD2Q9BXW9 1451 aa26.9■■□□□ 1.9
AC009088.2-201ENST00000564743 WDR62O43379 1518 aa26.87■■□□□ 1.89
AC009088.2-201ENST00000564743 CCDC88BA6NC98 1476 aa26.77■■□□□ 1.88
AC009088.2-201ENST00000564743 URB2Q14146 1524 aaKnown RBP26.64■■□□□ 1.85
AC009088.2-201ENST00000564743 PRDM2Q13029 1718 aa26.61■■□□□ 1.85
AC009088.2-201ENST00000564743 TOPBP1Q92547 1522 aa26.4■■□□□ 1.82
AC009088.2-201ENST00000564743 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
AC009088.2-201ENST00000564743 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
AC009088.2-201ENST00000564743 DNMBPQ6XZF7 1577 aa26.33■■□□□ 1.8
AC009088.2-201ENST00000564743 ZNF608Q9ULD9 1512 aaPredicted RBP26.28■■□□□ 1.8
AC009088.2-201ENST00000564743 OSCARQ8IYS5 282 aa26.27■■□□□ 1.8
AC009088.2-201ENST00000564743 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
AC009088.2-201ENST00000564743 TRIM41Q8WV44 630 aa26.15■■□□□ 1.78
AC009088.2-201ENST00000564743 POLA1P09884 1462 aaPredicted RBP26.15■■□□□ 1.78
AC009088.2-201ENST00000564743 EIF4G3O43432 1585 aaKnown RBP26.14■■□□□ 1.78
AC009088.2-201ENST00000564743 TARBP1Q13395 1621 aaKnown RBP26.11■■□□□ 1.77
AC009088.2-201ENST00000564743 AQRO60306 1485 aaKnown RBP eCLIP26.09■■□□□ 1.77
AC009088.2-201ENST00000564743 SOGA1O94964 1423 aa26.06■■□□□ 1.76
AC009088.2-201ENST00000564743 RAD54L2Q9Y4B4 1467 aa26.05■■□□□ 1.76
AC009088.2-201ENST00000564743 FGD5Q6ZNL6 1462 aa26.03■■□□□ 1.76
AC009088.2-201ENST00000564743 CUX1P39880 1505 aa26.03■■□□□ 1.76
AC009088.2-201ENST00000564743 TDRD9Q8NDG6 1382 aaKnown RBP25.97■■□□□ 1.75
AC009088.2-201ENST00000564743 FBLN2P98095 1184 aa25.93■■□□□ 1.74
AC009088.2-201ENST00000564743 WDR97A6NE52 1622 aa25.89■■□□□ 1.74
AC009088.2-201ENST00000564743 CHD1O14646 1710 aa25.87■■□□□ 1.73
AC009088.2-201ENST00000564743 RIMBP3CA6NJZ7 1639 aa25.85■■□□□ 1.73
AC009088.2-201ENST00000564743 RIMBP3BA6NNM3 1639 aa25.85■■□□□ 1.73
AC009088.2-201ENST00000564743 RIMBP3Q9UFD9 1639 aa25.85■■□□□ 1.73
AC009088.2-201ENST00000564743 SNAPC4Q5SXM2 1469 aa25.84■■□□□ 1.73
AC009088.2-201ENST00000564743 ARHGEF11O15085 1522 aa25.81■■□□□ 1.72
AC009088.2-201ENST00000564743 GRIN2BQ13224 1484 aa25.8■■□□□ 1.72
AC009088.2-201ENST00000564743 MAGI1Q96QZ7 1491 aaPredicted RBP25.78■■□□□ 1.72
AC009088.2-201ENST00000564743 CHMP7Q8WUX9 453 aaPredicted RBP25.77■■□□□ 1.72
AC009088.2-201ENST00000564743 GAPVD1Q14C86 1478 aa25.74■■□□□ 1.71
AC009088.2-201ENST00000564743 ABCA10Q8WWZ4 1543 aa25.73■■□□□ 1.71
AC009088.2-201ENST00000564743 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.71
AC009088.2-201ENST00000564743 SYNJ2O15056 1496 aa25.69■■□□□ 1.7
AC009088.2-201ENST00000564743 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
AC009088.2-201ENST00000564743 PBRM1Q86U86 1689 aa25.66■■□□□ 1.7
AC009088.2-201ENST00000564743 CYB5RLQ6IPT4 315 aa25.65■■□□□ 1.7
AC009088.2-201ENST00000564743 ABCA5Q8WWZ7 1642 aa25.65■■□□□ 1.7
AC009088.2-201ENST00000564743 SYNJ1O43426 1573 aa25.65■■□□□ 1.7
AC009088.2-201ENST00000564743 BIVM-ERCC5R4GMW8 1640 aa25.64■■□□□ 1.7
AC009088.2-201ENST00000564743 CLASP1Q7Z460 1538 aa25.6■■□□□ 1.69
AC009088.2-201ENST00000564743 ARAP1Q96P48 1450 aa25.58■■□□□ 1.69
AC009088.2-201ENST00000564743 GRIN2AQ12879 1464 aa25.47■■□□□ 1.67
AC009088.2-201ENST00000564743 ADAMTS12P58397 1594 aa25.46■■□□□ 1.67
AC009088.2-201ENST00000564743 FHAD1B1AJZ9 1412 aa25.43■■□□□ 1.66
AC009088.2-201ENST00000564743 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
AC009088.2-201ENST00000564743 NUP160Q12769 1436 aa25.36■■□□□ 1.65
AC009088.2-201ENST00000564743 CEP170Q5SW79 1584 aa25.34■■□□□ 1.65
AC009088.2-201ENST00000564743 TRHP20396 242 aaPredicted RBP25.33■■□□□ 1.65
AC009088.2-201ENST00000564743 KIF27Q86VH2 1401 aa25.22■■□□□ 1.63
AC009088.2-201ENST00000564743 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
AC009088.2-201ENST00000564743 SHROOM2Q13796 1616 aa25.18■■□□□ 1.62
AC009088.2-201ENST00000564743 IGF1RP08069 1367 aa25.16■■□□□ 1.62
AC009088.2-201ENST00000564743 JPH4Q96JJ6 628 aa25.13■■□□□ 1.61
AC009088.2-201ENST00000564743 PRG4Q92954 1404 aaPredicted RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms