RNA–Protein interactions for RNA: ENST00000564669.5

CENPN-207, Transcript of centromere protein N, humanhuman

TSL 3

Gene CENPN, Length 730 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPN-207ENST00000564669 NISCHQ9Y2I1 1504 aa52.4■■■■■ 5.98
CENPN-207ENST00000564669 CCDC180Q9P1Z9 1646 aa46.94■■■■■ 5.11
CENPN-207ENST00000564669 ABCC9O60706 1549 aa46.74■■■■■ 5.07
CENPN-207ENST00000564669 RB1CC1Q8TDY2 1594 aa44.56■■■■■ 4.72
CENPN-207ENST00000564669 NACADO15069 1562 aa44.29■■■■■ 4.68
CENPN-207ENST00000564669 DCAF8L2P0C7V8 631 aa44.23■■■■■ 4.67
CENPN-207ENST00000564669 MYO15BQ96JP2 1530 aa43.69■■■■■ 4.59
CENPN-207ENST00000564669 UNC13AQ9UPW8 1703 aa43.64■■■■■ 4.58
CENPN-207ENST00000564669 DNAJC5BQ9UF47 199 aa43.56■■■■■ 4.56
CENPN-207ENST00000564669 PABPN1Q86U42 306 aaKnown RBP eCLIP43.55■■■■■ 4.56
CENPN-207ENST00000564669 ZCCHC6Q5VYS8 1495 aaKnown RBP43.48■■■■■ 4.55
CENPN-207ENST00000564669 BICRAQ9NZM4 1560 aa43.24■■■■■ 4.51
CENPN-207ENST00000564669 DCAF1Q9Y4B6 1507 aa43.24■■■■■ 4.51
CENPN-207ENST00000564669 SCRIBQ14160 1630 aa42.85■■■■■ 4.45
CENPN-207ENST00000564669 SHROOM4Q9ULL8 1493 aa42.61■■■■■ 4.41
CENPN-207ENST00000564669 CC2D2AQ9P2K1 1620 aa42.23■■■■■ 4.35
CENPN-207ENST00000564669 EIF4G1Q04637 1599 aaKnown RBP42.18■■■■■ 4.34
CENPN-207ENST00000564669 CECR2Q9BXF3 1484 aa42.04■■■■■ 4.32
CENPN-207ENST00000564669 SMARCA4P51532 1647 aa40.86■■■■■ 4.13
CENPN-207ENST00000564669 NCAPD3P42695 1498 aa40.85■■■■■ 4.13
CENPN-207ENST00000564669 ATAD2BQ9ULI0 1458 aa40.79■■■■■ 4.12
CENPN-207ENST00000564669 SMARCA2P51531 1590 aa40.71■■■■■ 4.11
CENPN-207ENST00000564669 BAZ1AQ9NRL2 1556 aaPredicted RBP40.67■■■■■ 4.1
CENPN-207ENST00000564669 HMGXB3Q12766 1538 aa40.61■■■■■ 4.09
CENPN-207ENST00000564669 BAZ1BQ9UIG0 1483 aaKnown RBP40.45■■■■■ 4.07
CENPN-207ENST00000564669 MROH2BQ7Z745 1585 aa40.41■■■■■ 4.06
CENPN-207ENST00000564669 PEG3Q9GZU2 1588 aa40.4■■■■■ 4.06
CENPN-207ENST00000564669 ERCC6Q03468 1493 aa40.33■■■■■ 4.05
CENPN-207ENST00000564669 NESP48681 1621 aa40.22■■■■■ 4.03
CENPN-207ENST00000564669 CUX2O14529 1486 aa40.12■■■■■ 4.01
CENPN-207ENST00000564669 WIZO95785 1651 aa39.99■■■■□ 3.99
CENPN-207ENST00000564669 LAMC3Q9Y6N6 1575 aa39.94■■■■□ 3.98
CENPN-207ENST00000564669 DNAJC5Q9H3Z4 198 aa39.79■■■■□ 3.96
CENPN-207ENST00000564669 KIF21AQ7Z4S6 1674 aa39.76■■■■□ 3.96
CENPN-207ENST00000564669 THOC2Q8NI27 1593 aaKnown RBP39.76■■■■□ 3.95
CENPN-207ENST00000564669 PDS5BQ9NTI5 1447 aa39.68■■■■□ 3.94
CENPN-207ENST00000564669 CADPSQ9ULU8 1353 aa39.64■■■■□ 3.94
CENPN-207ENST00000564669 RSF1Q96T23 1441 aaPredicted RBP39.63■■■■□ 3.93
CENPN-207ENST00000564669 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
CENPN-207ENST00000564669 MRC2Q9UBG0 1479 aa39.35■■■■□ 3.89
CENPN-207ENST00000564669 CEP164Q9UPV0 1460 aa39.26■■■■□ 3.88
CENPN-207ENST00000564669 CFTRP13569 1480 aa39.24■■■■□ 3.87
CENPN-207ENST00000564669 WDR62O43379 1518 aa39.24■■■■□ 3.87
CENPN-207ENST00000564669 FANCD2Q9BXW9 1451 aa39.23■■■■□ 3.87
CENPN-207ENST00000564669 CCDC88BA6NC98 1476 aa38.99■■■■□ 3.83
CENPN-207ENST00000564669 PRDM2Q13029 1718 aa38.97■■■■□ 3.83
CENPN-207ENST00000564669 URB2Q14146 1524 aaKnown RBP38.89■■■■□ 3.82
CENPN-207ENST00000564669 TOPBP1Q92547 1522 aa38.52■■■■□ 3.76
CENPN-207ENST00000564669 IFT140Q96RY7 1462 aa38.43■■■■□ 3.74
CENPN-207ENST00000564669 ABCC8Q09428 1581 aa38.41■■■■□ 3.74
CENPN-207ENST00000564669 DNMBPQ6XZF7 1577 aa38.4■■■■□ 3.74
CENPN-207ENST00000564669 ZNF608Q9ULD9 1512 aaPredicted RBP38.38■■■■□ 3.74
CENPN-207ENST00000564669 OSCARQ8IYS5 282 aa38.33■■■■□ 3.73
CENPN-207ENST00000564669 TRIM41Q8WV44 630 aa38.27■■■■□ 3.72
CENPN-207ENST00000564669 EIF4G3O43432 1585 aaKnown RBP38.21■■■■□ 3.71
CENPN-207ENST00000564669 TARBP1Q13395 1621 aaKnown RBP38.16■■■■□ 3.7
CENPN-207ENST00000564669 SUPT5HO00267 1087 aaKnown RBP38.15■■■■□ 3.7
CENPN-207ENST00000564669 POLA1P09884 1462 aaPredicted RBP38.14■■■■□ 3.7
CENPN-207ENST00000564669 AQRO60306 1485 aaKnown RBP eCLIP38.07■■■■□ 3.683e-7■■■■■ 34.7
CENPN-207ENST00000564669 RAD54L2Q9Y4B4 1467 aa38.02■■■■□ 3.68
CENPN-207ENST00000564669 SOGA1O94964 1423 aa37.96■■■■□ 3.67
CENPN-207ENST00000564669 FGD5Q6ZNL6 1462 aa37.96■■■■□ 3.67
CENPN-207ENST00000564669 CUX1P39880 1505 aa37.95■■■■□ 3.67
CENPN-207ENST00000564669 CHD1O14646 1710 aa37.92■■■■□ 3.66
CENPN-207ENST00000564669 TDRD9Q8NDG6 1382 aaKnown RBP37.87■■■■□ 3.65
CENPN-207ENST00000564669 RIMBP3CA6NJZ7 1639 aa37.87■■■■□ 3.65
CENPN-207ENST00000564669 RIMBP3BA6NNM3 1639 aa37.87■■■■□ 3.65
CENPN-207ENST00000564669 RIMBP3Q9UFD9 1639 aa37.87■■■■□ 3.65
CENPN-207ENST00000564669 FBLN2P98095 1184 aa37.82■■■■□ 3.64
CENPN-207ENST00000564669 ARHGEF11O15085 1522 aa37.75■■■■□ 3.63
CENPN-207ENST00000564669 WDR97A6NE52 1622 aa37.75■■■■□ 3.63
CENPN-207ENST00000564669 SNAPC4Q5SXM2 1469 aa37.7■■■■□ 3.63
CENPN-207ENST00000564669 GRIN2BQ13224 1484 aa37.6■■■■□ 3.61
CENPN-207ENST00000564669 MAGI1Q96QZ7 1491 aaPredicted RBP37.57■■■■□ 3.6
CENPN-207ENST00000564669 PBRM1Q86U86 1689 aa37.56■■■■□ 3.6
CENPN-207ENST00000564669 CHMP7Q8WUX9 453 aaPredicted RBP37.53■■■■□ 3.6
CENPN-207ENST00000564669 GAPVD1Q14C86 1478 aa37.52■■■■□ 3.6
CENPN-207ENST00000564669 ABCA10Q8WWZ4 1543 aa37.5■■■■□ 3.59
CENPN-207ENST00000564669 CYB5RLQ6IPT4 315 aa37.47■■■■□ 3.59
CENPN-207ENST00000564669 ABCA5Q8WWZ7 1642 aa37.46■■■■□ 3.59
CENPN-207ENST00000564669 SYNJ2O15056 1496 aa37.45■■■■□ 3.59
CENPN-207ENST00000564669 SYNJ1O43426 1573 aa37.44■■■■□ 3.58
CENPN-207ENST00000564669 BIVM-ERCC5R4GMW8 1640 aa37.43■■■■□ 3.58
CENPN-207ENST00000564669 CLASP1Q7Z460 1538 aa37.41■■■■□ 3.58
CENPN-207ENST00000564669 TOP2BQ02880 1626 aa37.4■■■■□ 3.58
CENPN-207ENST00000564669 WRNQ14191 1432 aaPredicted RBP eCLIP37.4■■■■□ 3.58
CENPN-207ENST00000564669 ARAP1Q96P48 1450 aa37.39■■■■□ 3.58
CENPN-207ENST00000564669 ADAMTS12P58397 1594 aa37.17■■■■□ 3.54
CENPN-207ENST00000564669 GRIN2AQ12879 1464 aa37.13■■■■□ 3.54
CENPN-207ENST00000564669 ERICH3Q5RHP9 1530 aa37.04■■■■□ 3.52
CENPN-207ENST00000564669 FHAD1B1AJZ9 1412 aa37.02■■■■□ 3.52
CENPN-207ENST00000564669 CEP170Q5SW79 1584 aa37.01■■■■□ 3.52
CENPN-207ENST00000564669 TRHP20396 242 aaPredicted RBP37.01■■■■□ 3.52
CENPN-207ENST00000564669 NUP160Q12769 1436 aa36.96■■■■□ 3.51
CENPN-207ENST00000564669 ERCC6L2Q5T890 1561 aa36.89■■■■□ 3.5
CENPN-207ENST00000564669 SHROOM2Q13796 1616 aa36.8■■■■□ 3.48
CENPN-207ENST00000564669 KIF27Q86VH2 1401 aa36.68■■■■□ 3.46
CENPN-207ENST00000564669 RUSC2Q8N2Y8 1516 aa36.64■■■■□ 3.46
CENPN-207ENST00000564669 PRG4Q92954 1404 aaPredicted RBP36.62■■■■□ 3.45
CENPN-207ENST00000564669 JPH4Q96JJ6 628 aa36.6■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 233.1 ms