RNA–Protein interactions for RNA: ENST00000564370.5

STUB1-204, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 2 BASIC

Gene STUB1, Length 875 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-204ENST00000564370 NISCHQ9Y2I1 1504 aa35.22■■■■□ 3.23
STUB1-204ENST00000564370 CCDC180Q9P1Z9 1646 aa31.53■■■□□ 2.64
STUB1-204ENST00000564370 ABCC9O60706 1549 aa30.88■■■□□ 2.53
STUB1-204ENST00000564370 RB1CC1Q8TDY2 1594 aa29.72■■■□□ 2.35
STUB1-204ENST00000564370 NACADO15069 1562 aa29.63■■■□□ 2.33
STUB1-204ENST00000564370 MYO15BQ96JP2 1530 aa29.4■■■□□ 2.3
STUB1-204ENST00000564370 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
STUB1-204ENST00000564370 ZCCHC6Q5VYS8 1495 aaKnown RBP29.3■■■□□ 2.28
STUB1-204ENST00000564370 DCAF1Q9Y4B6 1507 aa29.19■■■□□ 2.26
STUB1-204ENST00000564370 UNC13AQ9UPW8 1703 aa29.14■■■□□ 2.25
STUB1-204ENST00000564370 BICRAQ9NZM4 1560 aa28.82■■■□□ 2.2
STUB1-204ENST00000564370 PABPN1Q86U42 306 aaKnown RBP eCLIP28.74■■■□□ 2.19
STUB1-204ENST00000564370 SCRIBQ14160 1630 aa28.64■■■□□ 2.18
STUB1-204ENST00000564370 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
STUB1-204ENST00000564370 DNAJC5BQ9UF47 199 aa28.49■■■□□ 2.15
STUB1-204ENST00000564370 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
STUB1-204ENST00000564370 CC2D2AQ9P2K1 1620 aa28.01■■■□□ 2.07
STUB1-204ENST00000564370 CECR2Q9BXF3 1484 aa27.8■■■□□ 2.04
STUB1-204ENST00000564370 SMARCA4P51532 1647 aa27.41■■□□□ 1.98
STUB1-204ENST00000564370 BAZ1AQ9NRL2 1556 aaPredicted RBP27.34■■□□□ 1.97
STUB1-204ENST00000564370 NCAPD3P42695 1498 aa27.29■■□□□ 1.96
STUB1-204ENST00000564370 ATAD2BQ9ULI0 1458 aa27.26■■□□□ 1.95
STUB1-204ENST00000564370 SMARCA2P51531 1590 aa27.26■■□□□ 1.95
STUB1-204ENST00000564370 HMGXB3Q12766 1538 aa27.2■■□□□ 1.94
STUB1-204ENST00000564370 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
STUB1-204ENST00000564370 MROH2BQ7Z745 1585 aa27.1■■□□□ 1.93
STUB1-204ENST00000564370 BAZ1BQ9UIG0 1483 aaKnown RBP27.03■■□□□ 1.92
STUB1-204ENST00000564370 WIZO95785 1651 aa26.85■■□□□ 1.89
STUB1-204ENST00000564370 RSF1Q96T23 1441 aaPredicted RBP26.69■■□□□ 1.86
STUB1-204ENST00000564370 NESP48681 1621 aa26.68■■□□□ 1.86
STUB1-204ENST00000564370 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
STUB1-204ENST00000564370 ERCC6Q03468 1493 aa26.65■■□□□ 1.86
STUB1-204ENST00000564370 TOP2AP11388 1531 aaKnown RBP26.55■■□□□ 1.84
STUB1-204ENST00000564370 CUX2O14529 1486 aa26.52■■□□□ 1.84
STUB1-204ENST00000564370 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
STUB1-204ENST00000564370 CADPSQ9ULU8 1353 aa26.45■■□□□ 1.82
STUB1-204ENST00000564370 THOC2Q8NI27 1593 aaKnown RBP26.42■■□□□ 1.82
STUB1-204ENST00000564370 PDS5BQ9NTI5 1447 aa26.42■■□□□ 1.82
STUB1-204ENST00000564370 CFTRP13569 1480 aa26.28■■□□□ 1.8
STUB1-204ENST00000564370 PRDM2Q13029 1718 aa26.24■■□□□ 1.79
STUB1-204ENST00000564370 CCDC88BA6NC98 1476 aa26.18■■□□□ 1.78
STUB1-204ENST00000564370 MRC2Q9UBG0 1479 aa26.18■■□□□ 1.78
STUB1-204ENST00000564370 CEP164Q9UPV0 1460 aa26.17■■□□□ 1.78
STUB1-204ENST00000564370 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
STUB1-204ENST00000564370 WDR62O43379 1518 aa26.14■■□□□ 1.78
STUB1-204ENST00000564370 URB2Q14146 1524 aaKnown RBP25.93■■□□□ 1.74
STUB1-204ENST00000564370 DNAJC5Q9H3Z4 198 aa25.88■■□□□ 1.73
STUB1-204ENST00000564370 ABCC8Q09428 1581 aa25.75■■□□□ 1.71
STUB1-204ENST00000564370 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
STUB1-204ENST00000564370 SUPT5HO00267 1087 aaKnown RBP25.73■■□□□ 1.71
STUB1-204ENST00000564370 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
STUB1-204ENST00000564370 IFT140Q96RY7 1462 aa25.63■■□□□ 1.69
STUB1-204ENST00000564370 TARBP1Q13395 1621 aaKnown RBP25.52■■□□□ 1.68
STUB1-204ENST00000564370 POLA1P09884 1462 aaPredicted RBP25.5■■□□□ 1.67
STUB1-204ENST00000564370 ZNF608Q9ULD9 1512 aaPredicted RBP25.5■■□□□ 1.67
STUB1-204ENST00000564370 EIF4G3O43432 1585 aaKnown RBP25.48■■□□□ 1.67
STUB1-204ENST00000564370 CUX1P39880 1505 aa25.46■■□□□ 1.67
STUB1-204ENST00000564370 FGD5Q6ZNL6 1462 aa25.4■■□□□ 1.66
STUB1-204ENST00000564370 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
STUB1-204ENST00000564370 RAD54L2Q9Y4B4 1467 aa25.35■■□□□ 1.65
STUB1-204ENST00000564370 SOGA1O94964 1423 aa25.35■■□□□ 1.65
STUB1-204ENST00000564370 AQRO60306 1485 aaKnown RBP eCLIP25.3■■□□□ 1.642e-7■■■■□ 22
STUB1-204ENST00000564370 OSCARQ8IYS5 282 aa25.27■■□□□ 1.64
STUB1-204ENST00000564370 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
STUB1-204ENST00000564370 CHD1O14646 1710 aa25.23■■□□□ 1.63
STUB1-204ENST00000564370 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
STUB1-204ENST00000564370 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.63
STUB1-204ENST00000564370 SYNJ1O43426 1573 aa25.18■■□□□ 1.62
STUB1-204ENST00000564370 WRNQ14191 1432 aaPredicted RBP eCLIP25.18■■□□□ 1.62
STUB1-204ENST00000564370 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
STUB1-204ENST00000564370 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
STUB1-204ENST00000564370 ABCA5Q8WWZ7 1642 aa25.13■■□□□ 1.61
STUB1-204ENST00000564370 GRIN2BQ13224 1484 aa25.12■■□□□ 1.61
STUB1-204ENST00000564370 SNAPC4Q5SXM2 1469 aa25.11■■□□□ 1.61
STUB1-204ENST00000564370 MAGI1Q96QZ7 1491 aaPredicted RBP25.1■■□□□ 1.61
STUB1-204ENST00000564370 GAPVD1Q14C86 1478 aa25.08■■□□□ 1.6
STUB1-204ENST00000564370 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
STUB1-204ENST00000564370 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
STUB1-204ENST00000564370 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
STUB1-204ENST00000564370 SYNJ2O15056 1496 aa25■■□□□ 1.59
STUB1-204ENST00000564370 FBLN2P98095 1184 aa24.98■■□□□ 1.59
STUB1-204ENST00000564370 ARHGEF11O15085 1522 aa24.95■■□□□ 1.58
STUB1-204ENST00000564370 CLASP1Q7Z460 1538 aa24.92■■□□□ 1.58
STUB1-204ENST00000564370 CHMP7Q8WUX9 453 aaPredicted RBP24.91■■□□□ 1.58
STUB1-204ENST00000564370 ADAMTS12P58397 1594 aa24.9■■□□□ 1.58
STUB1-204ENST00000564370 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
STUB1-204ENST00000564370 TRIM41Q8WV44 630 aa24.86■■□□□ 1.57
STUB1-204ENST00000564370 GRIN2AQ12879 1464 aa24.8■■□□□ 1.56
STUB1-204ENST00000564370 FHAD1B1AJZ9 1412 aa24.78■■□□□ 1.56
STUB1-204ENST00000564370 ARAP1Q96P48 1450 aa24.72■■□□□ 1.55
STUB1-204ENST00000564370 CEP170Q5SW79 1584 aa24.71■■□□□ 1.55
STUB1-204ENST00000564370 NUP160Q12769 1436 aa24.7■■□□□ 1.55
STUB1-204ENST00000564370 KIF27Q86VH2 1401 aa24.67■■□□□ 1.54
STUB1-204ENST00000564370 CUL7Q14999 1698 aa24.66■■□□□ 1.54
STUB1-204ENST00000564370 SHROOM2Q13796 1616 aa24.62■■□□□ 1.53
STUB1-204ENST00000564370 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
STUB1-204ENST00000564370 IGF1RP08069 1367 aa24.57■■□□□ 1.52
STUB1-204ENST00000564370 RUSC2Q8N2Y8 1516 aa24.55■■□□□ 1.52
STUB1-204ENST00000564370 ERCC6L2Q5T890 1561 aa24.5■■□□□ 1.51
STUB1-204ENST00000564370 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms