RNA–Protein interactions for RNA: ENST00000564136.5

KIFC3-216, Transcript of kinesin family member C3, humanhuman

TSL 2

Gene KIFC3, Length 3,071 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-216ENST00000564136 NISCHQ9Y2I1 1504 aa28.12■■■□□ 2.09
KIFC3-216ENST00000564136 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
KIFC3-216ENST00000564136 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
KIFC3-216ENST00000564136 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
KIFC3-216ENST00000564136 CCDC180Q9P1Z9 1646 aa23.78■■□□□ 1.4
KIFC3-216ENST00000564136 ZCCHC6Q5VYS8 1495 aaKnown RBP23.66■■□□□ 1.38
KIFC3-216ENST00000564136 HRCP23327 699 aa23.6■■□□□ 1.37
KIFC3-216ENST00000564136 PELP1Q8IZL8 1130 aaKnown RBP23.22■■□□□ 1.31
KIFC3-216ENST00000564136 PPARGC1BQ86YN6 1023 aaKnown RBP23.1■■□□□ 1.29
KIFC3-216ENST00000564136 ABCC9O60706 1549 aa22.96■■□□□ 1.27
KIFC3-216ENST00000564136 PCGF6Q9BYE7 350 aa22.85■■□□□ 1.25
KIFC3-216ENST00000564136 SCRIBQ14160 1630 aa22.74■■□□□ 1.23
KIFC3-216ENST00000564136 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
KIFC3-216ENST00000564136 MYO15BQ96JP2 1530 aa22.71■■□□□ 1.23
KIFC3-216ENST00000564136 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
KIFC3-216ENST00000564136 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
KIFC3-216ENST00000564136 MYT1Q01538 1121 aa22.4■■□□□ 1.18
KIFC3-216ENST00000564136 RSF1Q96T23 1441 aaPredicted RBP22.25■■□□□ 1.15
KIFC3-216ENST00000564136 LOC105371045A0A1W2PR82 267 aa22.25■■□□□ 1.15
KIFC3-216ENST00000564136 CECR2Q9BXF3 1484 aa22.21■■□□□ 1.15
KIFC3-216ENST00000564136 EHMT2Q96KQ7 1210 aa22.21■■□□□ 1.15
KIFC3-216ENST00000564136 NACADO15069 1562 aa22.17■■□□□ 1.14
KIFC3-216ENST00000564136 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
KIFC3-216ENST00000564136 PABPN1Q86U42 306 aaKnown RBP eCLIP22.08■■□□□ 1.13
KIFC3-216ENST00000564136 TRIM26Q12899 539 aaPredicted RBP22.05■■□□□ 1.12
KIFC3-216ENST00000564136 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
KIFC3-216ENST00000564136 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
KIFC3-216ENST00000564136 TRIM41Q8WV44 630 aa21.95■■□□□ 1.11
KIFC3-216ENST00000564136 ZEB1P37275 1124 aaPredicted RBP21.95■■□□□ 1.1
KIFC3-216ENST00000564136 WIZO95785 1651 aa21.88■■□□□ 1.09
KIFC3-216ENST00000564136 ACIN1Q9UKV3 1341 aaKnown RBP21.84■■□□□ 1.09
KIFC3-216ENST00000564136 NEUROD1Q13562 356 aa21.78■■□□□ 1.08
KIFC3-216ENST00000564136 UNC13AQ9UPW8 1703 aa21.69■■□□□ 1.06
KIFC3-216ENST00000564136 GTF3C3Q9Y5Q9 886 aa21.66■■□□□ 1.06
KIFC3-216ENST00000564136 BAZ1AQ9NRL2 1556 aaPredicted RBP21.58■■□□□ 1.04
KIFC3-216ENST00000564136 SMARCA4P51532 1647 aa21.48■■□□□ 1.03
KIFC3-216ENST00000564136 BICRAQ9NZM4 1560 aa21.45■■□□□ 1.02
KIFC3-216ENST00000564136 ABCC8Q09428 1581 aa21.41■■□□□ 1.02
KIFC3-216ENST00000564136 CCDC88BA6NC98 1476 aa21.4■■□□□ 1.02
KIFC3-216ENST00000564136 CENPBP07199 599 aaPredicted RBP21.39■■□□□ 1.01
KIFC3-216ENST00000564136 TTBK1Q5TCY1 1321 aaPredicted RBP21.35■■□□□ 1.01
KIFC3-216ENST00000564136 TOP2AP11388 1531 aaKnown RBP21.33■■□□□ 1
KIFC3-216ENST00000564136 SMARCA2P51531 1590 aa21.27■■□□□ 1
KIFC3-216ENST00000564136 DIEXFQ68CQ4 756 aaKnown RBP21.22■□□□□ 0.99
KIFC3-216ENST00000564136 EIF4G1Q04637 1599 aaKnown RBP21.15■□□□□ 0.98
KIFC3-216ENST00000564136 SOGA1O94964 1423 aa21.14■□□□□ 0.98
KIFC3-216ENST00000564136 RANGAP1P46060 587 aaPredicted RBP21.12■□□□□ 0.97
KIFC3-216ENST00000564136 RUSC2Q8N2Y8 1516 aa21.1■□□□□ 0.97
KIFC3-216ENST00000564136 ATAD2BQ9ULI0 1458 aa21.07■□□□□ 0.96
KIFC3-216ENST00000564136 UBTFP17480 764 aaKnown RBP21.07■□□□□ 0.96
KIFC3-216ENST00000564136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
KIFC3-216ENST00000564136 BAZ1BQ9UIG0 1483 aaKnown RBP21.06■□□□□ 0.96
KIFC3-216ENST00000564136 BCL11AQ9H165 835 aa21.01■□□□□ 0.95
KIFC3-216ENST00000564136 CCER1Q8TC90 406 aaPredicted RBP20.97■□□□□ 0.95
KIFC3-216ENST00000564136 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
KIFC3-216ENST00000564136 WRNQ14191 1432 aaPredicted RBP eCLIP20.93■□□□□ 0.94
KIFC3-216ENST00000564136 YTHDC1Q96MU7 727 aaKnown RBP20.87■□□□□ 0.93
KIFC3-216ENST00000564136 PEG3Q9GZU2 1588 aa20.85■□□□□ 0.93
KIFC3-216ENST00000564136 SYNJ1O43426 1573 aa20.83■□□□□ 0.93
KIFC3-216ENST00000564136 CEP162Q5TB80 1403 aa20.79■□□□□ 0.92
KIFC3-216ENST00000564136 ANP32EQ9BTT0 268 aa20.79■□□□□ 0.92
KIFC3-216ENST00000564136 ZNF316A6NFI3 1004 aaPredicted RBP20.74■□□□□ 0.91
KIFC3-216ENST00000564136 MIER1Q8N108 512 aa20.69■□□□□ 0.9
KIFC3-216ENST00000564136 TNIKQ9UKE5 1360 aa20.64■□□□□ 0.89
KIFC3-216ENST00000564136 GOLGA3Q08378 1498 aa20.6■□□□□ 0.89
KIFC3-216ENST00000564136 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
KIFC3-216ENST00000564136 TSHZ2Q9NRE2 1034 aa20.59■□□□□ 0.89
KIFC3-216ENST00000564136 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.89
KIFC3-216ENST00000564136 SUPT16HQ9Y5B9 1047 aaKnown RBP20.56■□□□□ 0.88
KIFC3-216ENST00000564136 EEA1Q15075 1411 aa20.56■□□□□ 0.88
KIFC3-216ENST00000564136 HNRNPUL2Q1KMD3 747 aaKnown RBP20.5■□□□□ 0.87
KIFC3-216ENST00000564136 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
KIFC3-216ENST00000564136 CEP164Q9UPV0 1460 aa20.49■□□□□ 0.87
KIFC3-216ENST00000564136 CLIP1P30622 1438 aa20.49■□□□□ 0.87
KIFC3-216ENST00000564136 HMGXB3Q12766 1538 aa20.48■□□□□ 0.87
KIFC3-216ENST00000564136 CUX1P39880 1505 aa20.46■□□□□ 0.87
KIFC3-216ENST00000564136 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
KIFC3-216ENST00000564136 PRKCSHP14314 528 aaPredicted RBP20.44■□□□□ 0.86
KIFC3-216ENST00000564136 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
KIFC3-216ENST00000564136 CC2D2AQ9P2K1 1620 aa20.43■□□□□ 0.86
KIFC3-216ENST00000564136 APLP2Q06481 763 aa20.41■□□□□ 0.86
KIFC3-216ENST00000564136 CFTRP13569 1480 aa20.39■□□□□ 0.86
KIFC3-216ENST00000564136 NESP48681 1621 aa20.34■□□□□ 0.85
KIFC3-216ENST00000564136 CADPSQ9ULU8 1353 aa20.33■□□□□ 0.85
KIFC3-216ENST00000564136 KIF21BO75037 1637 aa20.33■□□□□ 0.84
KIFC3-216ENST00000564136 P3H3Q8IVL6 736 aa20.3■□□□□ 0.84
KIFC3-216ENST00000564136 BIVM-ERCC5R4GMW8 1640 aa20.29■□□□□ 0.84
KIFC3-216ENST00000564136 CUX2O14529 1486 aa20.29■□□□□ 0.84
KIFC3-216ENST00000564136 KIF27Q86VH2 1401 aa20.28■□□□□ 0.84
KIFC3-216ENST00000564136 ATP1B4Q9UN42 357 aaPredicted RBP20.25■□□□□ 0.83
KIFC3-216ENST00000564136 VPS8Q8N3P4 1428 aa20.24■□□□□ 0.83
KIFC3-216ENST00000564136 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
KIFC3-216ENST00000564136 ITGAEP38570 1179 aa20.22■□□□□ 0.83
KIFC3-216ENST00000564136 FGD5Q6ZNL6 1462 aa20.2■□□□□ 0.82
KIFC3-216ENST00000564136 PRXQ9BXM0 1461 aa20.2■□□□□ 0.82
KIFC3-216ENST00000564136 FANCD2Q9BXW9 1451 aa20.18■□□□□ 0.82
KIFC3-216ENST00000564136 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
KIFC3-216ENST00000564136 ARAP1Q96P48 1450 aa20.14■□□□□ 0.81
KIFC3-216ENST00000564136 IGF1RP08069 1367 aa20.14■□□□□ 0.81
KIFC3-216ENST00000564136 CARMIL1Q5VZK9 1371 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms