RNA–Protein interactions for RNA: ENST00000563986.1

PKM-209, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 825 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-209ENST00000563986 NISCHQ9Y2I1 1504 aa29.64■■■□□ 2.34
PKM-209ENST00000563986 CCDC180Q9P1Z9 1646 aa26.48■■□□□ 1.83
PKM-209ENST00000563986 ABCC9O60706 1549 aa26.47■■□□□ 1.83
PKM-209ENST00000563986 RB1CC1Q8TDY2 1594 aa25.22■■□□□ 1.63
PKM-209ENST00000563986 NACADO15069 1562 aa24.97■■□□□ 1.59
PKM-209ENST00000563986 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
PKM-209ENST00000563986 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
PKM-209ENST00000563986 UNC13AQ9UPW8 1703 aa24.7■■□□□ 1.54
PKM-209ENST00000563986 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.54
PKM-209ENST00000563986 ZCCHC6Q5VYS8 1495 aaKnown RBP24.64■■□□□ 1.54
PKM-209ENST00000563986 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
PKM-209ENST00000563986 DCAF1Q9Y4B6 1507 aa24.52■■□□□ 1.52
PKM-209ENST00000563986 BICRAQ9NZM4 1560 aa24.4■■□□□ 1.5
PKM-209ENST00000563986 SHROOM4Q9ULL8 1493 aa24.14■■□□□ 1.46
PKM-209ENST00000563986 SCRIBQ14160 1630 aa24.12■■□□□ 1.45
PKM-209ENST00000563986 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.43
PKM-209ENST00000563986 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
PKM-209ENST00000563986 EIF4G1Q04637 1599 aaKnown RBP23.86■■□□□ 1.41
PKM-209ENST00000563986 SMARCA4P51532 1647 aa23.06■■□□□ 1.28
PKM-209ENST00000563986 DNAJC5Q9H3Z4 198 aa23.05■■□□□ 1.28
PKM-209ENST00000563986 BAZ1AQ9NRL2 1556 aaPredicted RBP22.98■■□□□ 1.27
PKM-209ENST00000563986 NCAPD3P42695 1498 aa22.98■■□□□ 1.27
PKM-209ENST00000563986 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
PKM-209ENST00000563986 CUX2O14529 1486 aa22.95■■□□□ 1.26
PKM-209ENST00000563986 ERCC6Q03468 1493 aa22.94■■□□□ 1.26
PKM-209ENST00000563986 SMARCA2P51531 1590 aa22.93■■□□□ 1.26
PKM-209ENST00000563986 HMGXB3Q12766 1538 aa22.87■■□□□ 1.25
PKM-209ENST00000563986 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
PKM-209ENST00000563986 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
PKM-209ENST00000563986 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
PKM-209ENST00000563986 NESP48681 1621 aa22.66■■□□□ 1.22
PKM-209ENST00000563986 WIZO95785 1651 aa22.61■■□□□ 1.21
PKM-209ENST00000563986 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
PKM-209ENST00000563986 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
PKM-209ENST00000563986 KIF21AQ7Z4S6 1674 aa22.5■■□□□ 1.19
PKM-209ENST00000563986 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
PKM-209ENST00000563986 PDS5BQ9NTI5 1447 aa22.42■■□□□ 1.18
PKM-209ENST00000563986 TOP2AP11388 1531 aaKnown RBP22.33■■□□□ 1.17
PKM-209ENST00000563986 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
PKM-209ENST00000563986 MRC2Q9UBG0 1479 aa22.23■■□□□ 1.15
PKM-209ENST00000563986 WDR62O43379 1518 aa22.19■■□□□ 1.14
PKM-209ENST00000563986 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
PKM-209ENST00000563986 CFTRP13569 1480 aa22.12■■□□□ 1.13
PKM-209ENST00000563986 CCDC88BA6NC98 1476 aa22.05■■□□□ 1.12
PKM-209ENST00000563986 FANCD2Q9BXW9 1451 aa22.04■■□□□ 1.12
PKM-209ENST00000563986 PRDM2Q13029 1718 aa22.03■■□□□ 1.12
PKM-209ENST00000563986 TRIM41Q8WV44 630 aa22■■□□□ 1.11
PKM-209ENST00000563986 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
PKM-209ENST00000563986 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
PKM-209ENST00000563986 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
PKM-209ENST00000563986 TOPBP1Q92547 1522 aa21.68■■□□□ 1.06
PKM-209ENST00000563986 IFT140Q96RY7 1462 aa21.67■■□□□ 1.06
PKM-209ENST00000563986 ABCC8Q09428 1581 aa21.64■■□□□ 1.05
PKM-209ENST00000563986 DNMBPQ6XZF7 1577 aa21.64■■□□□ 1.05
PKM-209ENST00000563986 RIMBP3CA6NJZ7 1639 aa21.62■■□□□ 1.05
PKM-209ENST00000563986 RIMBP3BA6NNM3 1639 aa21.62■■□□□ 1.05
PKM-209ENST00000563986 RIMBP3Q9UFD9 1639 aa21.62■■□□□ 1.05
PKM-209ENST00000563986 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
PKM-209ENST00000563986 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
PKM-209ENST00000563986 ARHGEF11O15085 1522 aa21.5■■□□□ 1.03
PKM-209ENST00000563986 CHD1O14646 1710 aa21.5■■□□□ 1.03
PKM-209ENST00000563986 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
PKM-209ENST00000563986 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
PKM-209ENST00000563986 CUX1P39880 1505 aa21.45■■□□□ 1.02
PKM-209ENST00000563986 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.02
PKM-209ENST00000563986 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
PKM-209ENST00000563986 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.013e-9■■■■■ 43
PKM-209ENST00000563986 SOGA1O94964 1423 aa21.36■■□□□ 1.01
PKM-209ENST00000563986 WDR97A6NE52 1622 aa21.31■■□□□ 1
PKM-209ENST00000563986 FBLN2P98095 1184 aa21.3■■□□□ 1
PKM-209ENST00000563986 CYB5RLQ6IPT4 315 aa21.29■■□□□ 1
PKM-209ENST00000563986 TDRD9Q8NDG6 1382 aaKnown RBP21.26■□□□□ 0.99
PKM-209ENST00000563986 ARAP1Q96P48 1450 aa21.25■□□□□ 0.99
PKM-209ENST00000563986 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
PKM-209ENST00000563986 TOP2BQ02880 1626 aa21.21■□□□□ 0.99
PKM-209ENST00000563986 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
PKM-209ENST00000563986 WRNQ14191 1432 aaPredicted RBP eCLIP21.2■□□□□ 0.981e-7■■■■□ 20.9
PKM-209ENST00000563986 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
PKM-209ENST00000563986 TRHP20396 242 aaPredicted RBP21.17■□□□□ 0.98
PKM-209ENST00000563986 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
PKM-209ENST00000563986 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
PKM-209ENST00000563986 CLASP1Q7Z460 1538 aa21.15■□□□□ 0.98
PKM-209ENST00000563986 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
PKM-209ENST00000563986 GRIN2BQ13224 1484 aa21.14■□□□□ 0.98
PKM-209ENST00000563986 ABCA5Q8WWZ7 1642 aa21.14■□□□□ 0.97
PKM-209ENST00000563986 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
PKM-209ENST00000563986 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
PKM-209ENST00000563986 SYNJ2O15056 1496 aa21.08■□□□□ 0.97
PKM-209ENST00000563986 ADAMTS12P58397 1594 aa20.95■□□□□ 0.94
PKM-209ENST00000563986 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
PKM-209ENST00000563986 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
PKM-209ENST00000563986 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
PKM-209ENST00000563986 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
PKM-209ENST00000563986 NUP160Q12769 1436 aa20.8■□□□□ 0.92
PKM-209ENST00000563986 KIF27Q86VH2 1401 aa20.77■□□□□ 0.91
PKM-209ENST00000563986 ERCC6L2Q5T890 1561 aa20.76■□□□□ 0.91
PKM-209ENST00000563986 SHROOM2Q13796 1616 aa20.75■□□□□ 0.91
PKM-209ENST00000563986 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
PKM-209ENST00000563986 IGF1RP08069 1367 aa20.72■□□□□ 0.91
PKM-209ENST00000563986 CUL7Q14999 1698 aa20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms