RNA–Protein interactions for RNA: ENST00000563830.2

SNAP23-208, Transcript of synaptosome associated protein 23, humanhuman

TSL 5

Gene SNAP23, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-208ENST00000563830 CHIC1Q5VXU3 224 aa22.52■■□□□ 1.2
SNAP23-208ENST00000563830 AEBP2Q6ZN18 517 aaPredicted RBP22.45■■□□□ 1.18
SNAP23-208ENST00000563830 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
SNAP23-208ENST00000563830 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
SNAP23-208ENST00000563830 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
SNAP23-208ENST00000563830 FOXD1Q16676 465 aa17.62■□□□□ 0.41
SNAP23-208ENST00000563830 ADRA2BP18089 450 aa17.19■□□□□ 0.34
SNAP23-208ENST00000563830 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
SNAP23-208ENST00000563830 PIAS4Q8N2W9 510 aaPredicted RBP16.74■□□□□ 0.27
SNAP23-208ENST00000563830 MSH5O43196 834 aa16.32■□□□□ 0.2
SNAP23-208ENST00000563830 PPP4R3CPQ6ZMV5 832 aa16.28■□□□□ 0.2
SNAP23-208ENST00000563830 KCNA4P22459 653 aa16.27■□□□□ 0.2
SNAP23-208ENST00000563830 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
SNAP23-208ENST00000563830 SCAF1Q9H7N4 1312 aaKnown RBP16.09■□□□□ 0.17
SNAP23-208ENST00000563830 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
SNAP23-208ENST00000563830 NPM3O75607 178 aaKnown RBP15.71■□□□□ 0.11
SNAP23-208ENST00000563830 POTEDQ86YR6 584 aa15.7■□□□□ 0.1
SNAP23-208ENST00000563830 SLC4A1APQ9BWU0 796 aaKnown RBP15.67■□□□□ 0.1
SNAP23-208ENST00000563830 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
SNAP23-208ENST00000563830 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
SNAP23-208ENST00000563830 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
SNAP23-208ENST00000563830 MAPK8IP2Q13387 824 aaPredicted RBP15.43■□□□□ 0.06
SNAP23-208ENST00000563830 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
SNAP23-208ENST00000563830 HOXD11P31277 338 aaPredicted RBP15.27■□□□□ 0.04
SNAP23-208ENST00000563830 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
SNAP23-208ENST00000563830 FOXD4L1Q9NU39 408 aa15.02■□□□□ -0
SNAP23-208ENST00000563830 ZBTB22O15209 634 aa14.93□□□□□ -0.02
SNAP23-208ENST00000563830 SLC4A2P04920 1241 aa14.71□□□□□ -0.05
SNAP23-208ENST00000563830 MYCNP04198 464 aaPredicted RBP14.64□□□□□ -0.07
SNAP23-208ENST00000563830 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
SNAP23-208ENST00000563830 DCAF8L1A6NGE4 600 aa14.5□□□□□ -0.09
SNAP23-208ENST00000563830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
SNAP23-208ENST00000563830 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
SNAP23-208ENST00000563830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.46□□□□□ -0.092e-7■□□□□ 11.2
SNAP23-208ENST00000563830 SAMD1Q6SPF0 538 aaPredicted RBP14.37□□□□□ -0.11
SNAP23-208ENST00000563830 APLP2Q06481 763 aa14.28□□□□□ -0.12
SNAP23-208ENST00000563830 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
SNAP23-208ENST00000563830 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
SNAP23-208ENST00000563830 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
SNAP23-208ENST00000563830 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
SNAP23-208ENST00000563830 ZNF219Q9P2Y4 722 aaPredicted RBP13.89□□□□□ -0.19
SNAP23-208ENST00000563830 FKBP8Q14318 412 aa13.75□□□□□ -0.21
SNAP23-208ENST00000563830 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
SNAP23-208ENST00000563830 CAPN15O75808 1086 aa13.62□□□□□ -0.23
SNAP23-208ENST00000563830 FBLN2P98095 1184 aa13.62□□□□□ -0.23
SNAP23-208ENST00000563830 TRHP20396 242 aaPredicted RBP13.61□□□□□ -0.23
SNAP23-208ENST00000563830 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
SNAP23-208ENST00000563830 POLA2Q14181 598 aa13.55□□□□□ -0.24
SNAP23-208ENST00000563830 CACNB1Q02641 598 aaPredicted RBP13.47□□□□□ -0.25
SNAP23-208ENST00000563830 AMER1Q5JTC6 1135 aaPredicted RBP13.47□□□□□ -0.25
SNAP23-208ENST00000563830 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
SNAP23-208ENST00000563830 MKRN4PQ13434 485 aaPredicted RBP13.44□□□□□ -0.26
SNAP23-208ENST00000563830 FBXO3Q9UK99 471 aa13.43□□□□□ -0.26
SNAP23-208ENST00000563830 PROM2Q8N271 834 aa13.39□□□□□ -0.27
SNAP23-208ENST00000563830 DSG3P32926 999 aa13.34□□□□□ -0.27
SNAP23-208ENST00000563830 ABCB7O75027 752 aa13.28□□□□□ -0.28
SNAP23-208ENST00000563830 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
SNAP23-208ENST00000563830 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
SNAP23-208ENST00000563830 SPDYE2Q495Y8 402 aa13.2□□□□□ -0.3
SNAP23-208ENST00000563830 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
SNAP23-208ENST00000563830 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
SNAP23-208ENST00000563830 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
SNAP23-208ENST00000563830 VASPP50552 380 aaPredicted RBP13.06□□□□□ -0.32
SNAP23-208ENST00000563830 STAG3Q9UJ98 1225 aa13.05□□□□□ -0.32
SNAP23-208ENST00000563830 OSCARQ8IYS5 282 aa13.01□□□□□ -0.33
SNAP23-208ENST00000563830 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
SNAP23-208ENST00000563830 PABPN1Q86U42 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
SNAP23-208ENST00000563830 IFNLR1Q8IU57 520 aaPredicted RBP12.84□□□□□ -0.35
SNAP23-208ENST00000563830 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
SNAP23-208ENST00000563830 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
SNAP23-208ENST00000563830 AKT1S1Q96B36 256 aa12.77□□□□□ -0.37
SNAP23-208ENST00000563830 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
SNAP23-208ENST00000563830 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
SNAP23-208ENST00000563830 SLC24A1O60721 1099 aa12.71□□□□□ -0.37
SNAP23-208ENST00000563830 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
SNAP23-208ENST00000563830 MIER1Q8N108 512 aa12.69□□□□□ -0.38
SNAP23-208ENST00000563830 SPDYE1Q8NFV5 336 aaPredicted RBP12.69□□□□□ -0.38
SNAP23-208ENST00000563830 PKD2Q13563 968 aa12.58□□□□□ -0.4
SNAP23-208ENST00000563830 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
SNAP23-208ENST00000563830 REM2Q8IYK8 340 aaPredicted RBP12.52□□□□□ -0.41
SNAP23-208ENST00000563830 PRR29P0C7W0 189 aa12.48□□□□□ -0.41
SNAP23-208ENST00000563830 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
SNAP23-208ENST00000563830 GSE1Q14687 1217 aa12.44□□□□□ -0.42
SNAP23-208ENST00000563830 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
SNAP23-208ENST00000563830 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
SNAP23-208ENST00000563830 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
SNAP23-208ENST00000563830 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
SNAP23-208ENST00000563830 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
SNAP23-208ENST00000563830 NPM1P06748 294 aaKnown RBP eCLIP12.34□□□□□ -0.43
SNAP23-208ENST00000563830 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
SNAP23-208ENST00000563830 NUBP1P53384 320 aa12.33□□□□□ -0.44
SNAP23-208ENST00000563830 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
SNAP23-208ENST00000563830 BBXQ8WY36 941 aaPredicted RBP12.31□□□□□ -0.44
SNAP23-208ENST00000563830 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
SNAP23-208ENST00000563830 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
SNAP23-208ENST00000563830 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.29□□□□□ -0.44
SNAP23-208ENST00000563830 CHRM1P11229 460 aaPredicted RBP12.27□□□□□ -0.45
SNAP23-208ENST00000563830 POTEHQ6S545 545 aa12.25□□□□□ -0.45
SNAP23-208ENST00000563830 RGL2O15211 777 aa12.24□□□□□ -0.45
SNAP23-208ENST00000563830 DCAF8Q5TAQ9 597 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms