RNA–Protein interactions for RNA: ENST00000563641.5

PARN-209, Transcript of poly(A)-specific ribonuclease, humanhuman

TSL 5

Gene PARN, Length 1,029 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARN-209ENST00000563641 NISCHQ9Y2I1 1504 aa42.71■■■■■ 4.43
PARN-209ENST00000563641 CCDC180Q9P1Z9 1646 aa37.76■■■■□ 3.63
PARN-209ENST00000563641 ABCC9O60706 1549 aa36.86■■■■□ 3.49
PARN-209ENST00000563641 DCAF8L2P0C7V8 631 aa35.68■■■■□ 3.3
PARN-209ENST00000563641 ZCCHC6Q5VYS8 1495 aaKnown RBP35.6■■■■□ 3.29
PARN-209ENST00000563641 NACADO15069 1562 aa35.5■■■■□ 3.27
PARN-209ENST00000563641 RB1CC1Q8TDY2 1594 aa35.47■■■■□ 3.27
PARN-209ENST00000563641 MYO15BQ96JP2 1530 aa35.36■■■■□ 3.25
PARN-209ENST00000563641 DCAF1Q9Y4B6 1507 aa35.3■■■■□ 3.24
PARN-209ENST00000563641 UNC13AQ9UPW8 1703 aa34.69■■■■□ 3.14
PARN-209ENST00000563641 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
PARN-209ENST00000563641 SCRIBQ14160 1630 aa34.54■■■■□ 3.12
PARN-209ENST00000563641 BICRAQ9NZM4 1560 aa34.47■■■■□ 3.11
PARN-209ENST00000563641 SHROOM4Q9ULL8 1493 aa33.99■■■■□ 3.03
PARN-209ENST00000563641 DNAJC5BQ9UF47 199 aa33.78■■■■□ 3
PARN-209ENST00000563641 EIF4G1Q04637 1599 aaKnown RBP33.5■■■□□ 2.95
PARN-209ENST00000563641 CC2D2AQ9P2K1 1620 aa33.32■■■□□ 2.92
PARN-209ENST00000563641 CECR2Q9BXF3 1484 aa33.31■■■□□ 2.92
PARN-209ENST00000563641 SMARCA4P51532 1647 aa33.05■■■□□ 2.88
PARN-209ENST00000563641 BAZ1AQ9NRL2 1556 aaPredicted RBP33.03■■■□□ 2.88
PARN-209ENST00000563641 MROH2BQ7Z745 1585 aa32.95■■■□□ 2.86
PARN-209ENST00000563641 ATAD2BQ9ULI0 1458 aa32.87■■■□□ 2.85
PARN-209ENST00000563641 NCAPD3P42695 1498 aa32.81■■■□□ 2.84
PARN-209ENST00000563641 SMARCA2P51531 1590 aa32.76■■■□□ 2.84
PARN-209ENST00000563641 PEG3Q9GZU2 1588 aa32.73■■■□□ 2.83
PARN-209ENST00000563641 RSF1Q96T23 1441 aaPredicted RBP32.67■■■□□ 2.82
PARN-209ENST00000563641 HMGXB3Q12766 1538 aa32.6■■■□□ 2.81
PARN-209ENST00000563641 WIZO95785 1651 aa32.59■■■□□ 2.81
PARN-209ENST00000563641 BAZ1BQ9UIG0 1483 aaKnown RBP32.56■■■□□ 2.8
PARN-209ENST00000563641 TOP2AP11388 1531 aaKnown RBP32.2■■■□□ 2.74
PARN-209ENST00000563641 SUPT5HO00267 1087 aaKnown RBP32.05■■■□□ 2.72
PARN-209ENST00000563641 NESP48681 1621 aa31.99■■■□□ 2.71
PARN-209ENST00000563641 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
PARN-209ENST00000563641 CADPSQ9ULU8 1353 aa31.88■■■□□ 2.69
PARN-209ENST00000563641 LAMC3Q9Y6N6 1575 aa31.84■■■□□ 2.69
PARN-209ENST00000563641 CFTRP13569 1480 aa31.72■■■□□ 2.67
PARN-209ENST00000563641 ERCC6Q03468 1493 aa31.69■■■□□ 2.66
PARN-209ENST00000563641 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
PARN-209ENST00000563641 KIF21AQ7Z4S6 1674 aa31.54■■■□□ 2.64
PARN-209ENST00000563641 FANCD2Q9BXW9 1451 aa31.48■■■□□ 2.63
PARN-209ENST00000563641 CEP164Q9UPV0 1460 aa31.39■■■□□ 2.62
PARN-209ENST00000563641 PRDM2Q13029 1718 aa31.38■■■□□ 2.61
PARN-209ENST00000563641 THOC2Q8NI27 1593 aaKnown RBP31.37■■■□□ 2.61
PARN-209ENST00000563641 MRC2Q9UBG0 1479 aa31.3■■■□□ 2.6
PARN-209ENST00000563641 CUX2O14529 1486 aa31.26■■■□□ 2.59
PARN-209ENST00000563641 WDR62O43379 1518 aa31.19■■■□□ 2.58
PARN-209ENST00000563641 URB2Q14146 1524 aaKnown RBP31.19■■■□□ 2.58
PARN-209ENST00000563641 TOPBP1Q92547 1522 aa31.01■■■□□ 2.55
PARN-209ENST00000563641 ABCC8Q09428 1581 aa30.97■■■□□ 2.55
PARN-209ENST00000563641 DNMBPQ6XZF7 1577 aa30.95■■■□□ 2.54
PARN-209ENST00000563641 CUX1P39880 1505 aa30.88■■■□□ 2.53
PARN-209ENST00000563641 POLA1P09884 1462 aaPredicted RBP30.76■■■□□ 2.52
PARN-209ENST00000563641 WRNQ14191 1432 aaPredicted RBP eCLIP30.74■■■□□ 2.51
PARN-209ENST00000563641 IFT140Q96RY7 1462 aa30.73■■■□□ 2.51
PARN-209ENST00000563641 FGD5Q6ZNL6 1462 aa30.71■■■□□ 2.51
PARN-209ENST00000563641 RAD54L2Q9Y4B4 1467 aa30.68■■■□□ 2.5
PARN-209ENST00000563641 SOGA1O94964 1423 aa30.67■■■□□ 2.5
PARN-209ENST00000563641 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
PARN-209ENST00000563641 ZNF608Q9ULD9 1512 aaPredicted RBP30.65■■■□□ 2.5
PARN-209ENST00000563641 TARBP1Q13395 1621 aaKnown RBP30.65■■■□□ 2.5
PARN-209ENST00000563641 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
PARN-209ENST00000563641 BIVM-ERCC5R4GMW8 1640 aa30.6■■■□□ 2.49
PARN-209ENST00000563641 AQRO60306 1485 aaKnown RBP eCLIP30.51■■■□□ 2.481e-7■■■■■ 35.5
PARN-209ENST00000563641 TDRD9Q8NDG6 1382 aaKnown RBP30.51■■■□□ 2.47
PARN-209ENST00000563641 EIF4G3O43432 1585 aaKnown RBP30.44■■■□□ 2.46
PARN-209ENST00000563641 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
PARN-209ENST00000563641 WDR97A6NE52 1622 aa30.4■■■□□ 2.46
PARN-209ENST00000563641 GAPVD1Q14C86 1478 aa30.29■■■□□ 2.44
PARN-209ENST00000563641 ABCA5Q8WWZ7 1642 aa30.25■■■□□ 2.43
PARN-209ENST00000563641 GRIN2BQ13224 1484 aa30.24■■■□□ 2.43
PARN-209ENST00000563641 TRIM41Q8WV44 630 aa30.23■■■□□ 2.43
PARN-209ENST00000563641 DNAJC5Q9H3Z4 198 aa30.18■■■□□ 2.42
PARN-209ENST00000563641 SNAPC4Q5SXM2 1469 aa30.17■■■□□ 2.42
PARN-209ENST00000563641 PBRM1Q86U86 1689 aa30.14■■■□□ 2.42
PARN-209ENST00000563641 OSCARQ8IYS5 282 aa30.11■■■□□ 2.41
PARN-209ENST00000563641 MAGI1Q96QZ7 1491 aaPredicted RBP30.11■■■□□ 2.41
PARN-209ENST00000563641 FBLN2P98095 1184 aa30.1■■■□□ 2.41
PARN-209ENST00000563641 KIF27Q86VH2 1401 aa30.07■■■□□ 2.4
PARN-209ENST00000563641 CHIC1Q5VXU3 224 aa30.07■■■□□ 2.4
PARN-209ENST00000563641 CHMP7Q8WUX9 453 aaPredicted RBP30.04■■■□□ 2.4
PARN-209ENST00000563641 ERICH3Q5RHP9 1530 aa30.04■■■□□ 2.4
PARN-209ENST00000563641 IGF1RP08069 1367 aa30.03■■■□□ 2.4
PARN-209ENST00000563641 CHD1O14646 1710 aa30.02■■■□□ 2.4
PARN-209ENST00000563641 SYNJ2O15056 1496 aa30.01■■■□□ 2.4
PARN-209ENST00000563641 RUSC2Q8N2Y8 1516 aa29.98■■■□□ 2.39
PARN-209ENST00000563641 FHAD1B1AJZ9 1412 aa29.94■■■□□ 2.38
PARN-209ENST00000563641 ADAMTS12P58397 1594 aa29.94■■■□□ 2.38
PARN-209ENST00000563641 GRIN2AQ12879 1464 aa29.85■■■□□ 2.37
PARN-209ENST00000563641 CARMIL1Q5VZK9 1371 aa29.8■■■□□ 2.36
PARN-209ENST00000563641 CUL7Q14999 1698 aa29.77■■■□□ 2.36
PARN-209ENST00000563641 NUP160Q12769 1436 aa29.72■■■□□ 2.35
PARN-209ENST00000563641 CLASP1Q7Z460 1538 aa29.72■■■□□ 2.35
PARN-209ENST00000563641 CEP170Q5SW79 1584 aa29.7■■■□□ 2.35
PARN-209ENST00000563641 CSRNP3Q8WYN3 585 aa29.66■■■□□ 2.34
PARN-209ENST00000563641 FAM9AQ8IZU1 332 aaPredicted RBP29.64■■■□□ 2.34
PARN-209ENST00000563641 RAPGEF2Q9Y4G8 1499 aa29.61■■■□□ 2.33
PARN-209ENST00000563641 EEA1Q15075 1411 aa29.61■■■□□ 2.33
PARN-209ENST00000563641 PRXQ9BXM0 1461 aa29.59■■■□□ 2.33
PARN-209ENST00000563641 ARHGEF11O15085 1522 aa29.55■■■□□ 2.32
PARN-209ENST00000563641 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms