RNA–Protein interactions for RNA: ENST00000563433.1

USP10-209, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 2

Gene USP10, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-209ENST00000563433 PUS1Q9Y606 427 aaKnown RBP eCLIP3.42□□□□□ -1.861e-5■■■■■ 49.7
USP10-209ENST00000563433 GPKOWQ92917 476 aaPredicted RBP eCLIP8.26□□□□□ -1.092e-6■■■■■ 37.1
USP10-209ENST00000563433 AQRO60306 1485 aaKnown RBP eCLIP3.37□□□□□ -1.873e-7■■■■■ 35.2
USP10-209ENST00000563433 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.88□□□□□ -2.117e-9■■■■□ 25.7
USP10-209ENST00000563433 SF3B4Q15427 424 aaKnown RBP eCLIP3.79□□□□□ -1.82e-7■■■■□ 25.7
USP10-209ENST00000563433 YBX3P16989 372 aaKnown RBP eCLIP7.06□□□□□ -1.287e-7■■■■□ 23.6
USP10-209ENST00000563433 HNRNPMP52272 730 aaKnown RBP eCLIP4.72□□□□□ -1.657e-7■■■■□ 23.6
USP10-209ENST00000563433 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.214e-6■■■■□ 23.1
USP10-209ENST00000563433 G3BP1Q13283 466 aaKnown RBP eCLIP4.67□□□□□ -1.668e-6■■■■□ 20.2
USP10-209ENST00000563433 TARDBPQ13148 414 aaKnown RBP eCLIP5.02□□□□□ -1.611e-6■■■□□ 18.5
USP10-209ENST00000563433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.66■□□□□ 0.12e-11■■□□□ 14.4
USP10-209ENST00000563433 U2AF2P26368 475 aaKnown RBP eCLIP3.68□□□□□ -1.826e-7■■□□□ 13.7
USP10-209ENST00000563433 SF3A3Q12874 501 aaKnown RBP eCLIP4.35□□□□□ -1.712e-16■□□□□ 11.2
USP10-209ENST00000563433 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.15□□□□□ -1.428e-15■□□□□ 9.8
USP10-209ENST00000563433 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.36□□□□□ -1.079e-10■□□□□ 9.6
USP10-209ENST00000563433 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.73□□□□□ -1.651e-10■□□□□ 9
USP10-209ENST00000563433 EFTUD2Q15029 972 aaKnown RBP eCLIP3.88□□□□□ -1.792e-6■□□□□ 8.7
Retrieved 17 of 17 RNA–protein pairs in 5 ms