RNA–Protein interactions for RNA: ENST00000563333.1

SNAP23-205, Transcript of synaptosome associated protein 23, humanhuman

TSL 2

Gene SNAP23, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-205ENST00000563333 AEBP2Q6ZN18 517 aaPredicted RBP22.17■■□□□ 1.14
SNAP23-205ENST00000563333 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
SNAP23-205ENST00000563333 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
SNAP23-205ENST00000563333 PHF23Q9BUL5 403 aaPredicted RBP18.53■□□□□ 0.56
SNAP23-205ENST00000563333 FOXD1Q16676 465 aa17.73■□□□□ 0.43
SNAP23-205ENST00000563333 POTEDQ86YR6 584 aa17.52■□□□□ 0.4
SNAP23-205ENST00000563333 MSH5O43196 834 aa16.67■□□□□ 0.26
SNAP23-205ENST00000563333 PIAS4Q8N2W9 510 aaPredicted RBP16.32■□□□□ 0.2
SNAP23-205ENST00000563333 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
SNAP23-205ENST00000563333 ADRA2BP18089 450 aa16.01■□□□□ 0.15
SNAP23-205ENST00000563333 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
SNAP23-205ENST00000563333 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
SNAP23-205ENST00000563333 DMRT2Q9Y5R5 561 aa14.86□□□□□ -0.03
SNAP23-205ENST00000563333 CACNB1Q02641 598 aaPredicted RBP14.72□□□□□ -0.05
SNAP23-205ENST00000563333 KCNA4P22459 653 aa14.5□□□□□ -0.09
SNAP23-205ENST00000563333 SCAF1Q9H7N4 1312 aaKnown RBP14.4□□□□□ -0.1
SNAP23-205ENST00000563333 RNF39Q9H2S5 420 aa14.27□□□□□ -0.13
SNAP23-205ENST00000563333 DCAF8L1A6NGE4 600 aa14.21□□□□□ -0.13
SNAP23-205ENST00000563333 PPP4R3CPQ6ZMV5 832 aa14.2□□□□□ -0.14
SNAP23-205ENST00000563333 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
SNAP23-205ENST00000563333 EHMT2Q96KQ7 1210 aa14.07□□□□□ -0.16
SNAP23-205ENST00000563333 C1QBPQ07021 282 aaKnown RBP13.93□□□□□ -0.18
SNAP23-205ENST00000563333 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
SNAP23-205ENST00000563333 SLC4A1APQ9BWU0 796 aaKnown RBP13.78□□□□□ -0.2
SNAP23-205ENST00000563333 NCBP3Q53F19 620 aaKnown RBP13.76□□□□□ -0.21
SNAP23-205ENST00000563333 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
SNAP23-205ENST00000563333 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
SNAP23-205ENST00000563333 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
SNAP23-205ENST00000563333 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
SNAP23-205ENST00000563333 POTEHQ6S545 545 aa13.54□□□□□ -0.24
SNAP23-205ENST00000563333 ZBTB22O15209 634 aa13.44□□□□□ -0.26
SNAP23-205ENST00000563333 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.283e-7■■□□□ 11.4
SNAP23-205ENST00000563333 DSG3P32926 999 aa13.16□□□□□ -0.3
SNAP23-205ENST00000563333 SPINK5Q9NQ38 1064 aaPredicted RBP13.13□□□□□ -0.31
SNAP23-205ENST00000563333 U3KPZ7 1027 aaPredicted RBP13.1□□□□□ -0.31
SNAP23-205ENST00000563333 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
SNAP23-205ENST00000563333 CAPN15O75808 1086 aa13□□□□□ -0.33
SNAP23-205ENST00000563333 SLC4A2P04920 1241 aa12.97□□□□□ -0.33
SNAP23-205ENST00000563333 ABCB7O75027 752 aa12.73□□□□□ -0.37
SNAP23-205ENST00000563333 TRHP20396 242 aaPredicted RBP12.65□□□□□ -0.38
SNAP23-205ENST00000563333 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
SNAP23-205ENST00000563333 ZNF219Q9P2Y4 722 aaPredicted RBP12.53□□□□□ -0.4
SNAP23-205ENST00000563333 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
SNAP23-205ENST00000563333 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
SNAP23-205ENST00000563333 ATXN8OSP0DMR3 200 aa12.41□□□□□ -0.42
SNAP23-205ENST00000563333 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
SNAP23-205ENST00000563333 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
SNAP23-205ENST00000563333 APLP2Q06481 763 aa12.36□□□□□ -0.43
SNAP23-205ENST00000563333 FKBP8Q14318 412 aa12.28□□□□□ -0.44
SNAP23-205ENST00000563333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.25□□□□□ -0.45
SNAP23-205ENST00000563333 HNRNPUL2Q1KMD3 747 aaKnown RBP12.25□□□□□ -0.45
SNAP23-205ENST00000563333 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
SNAP23-205ENST00000563333 POLA2Q14181 598 aa12.18□□□□□ -0.46
SNAP23-205ENST00000563333 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
SNAP23-205ENST00000563333 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
SNAP23-205ENST00000563333 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
SNAP23-205ENST00000563333 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
SNAP23-205ENST00000563333 EVX2Q03828 476 aa11.99□□□□□ -0.49
SNAP23-205ENST00000563333 HAX1O00165 279 aa11.98□□□□□ -0.49
SNAP23-205ENST00000563333 MKRN4PQ13434 485 aaPredicted RBP11.94□□□□□ -0.5
SNAP23-205ENST00000563333 PITPNM1O00562 1244 aa11.92□□□□□ -0.5
SNAP23-205ENST00000563333 FXR2P51116 673 aaKnown RBP eCLIP11.92□□□□□ -0.5
SNAP23-205ENST00000563333 OSCARQ8IYS5 282 aa11.87□□□□□ -0.51
SNAP23-205ENST00000563333 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
SNAP23-205ENST00000563333 SPDYE4A6NLX3 237 aa11.75□□□□□ -0.53
SNAP23-205ENST00000563333 ZBTB12Q9Y330 459 aaPredicted RBP11.74□□□□□ -0.53
SNAP23-205ENST00000563333 FBLN2P98095 1184 aa11.64□□□□□ -0.55
SNAP23-205ENST00000563333 LHX8Q68G74 356 aa11.6□□□□□ -0.55
SNAP23-205ENST00000563333 PROM2Q8N271 834 aa11.59□□□□□ -0.55
SNAP23-205ENST00000563333 C19orf67A6NJJ6 358 aa11.57□□□□□ -0.56
SNAP23-205ENST00000563333 GABBR2O75899 941 aa11.55□□□□□ -0.56
SNAP23-205ENST00000563333 PRKAR2AP13861 404 aaKnown RBP11.55□□□□□ -0.56
SNAP23-205ENST00000563333 SLC24A1O60721 1099 aa11.5□□□□□ -0.57
SNAP23-205ENST00000563333 VASPP50552 380 aaPredicted RBP11.48□□□□□ -0.57
SNAP23-205ENST00000563333 FBXO3Q9UK99 471 aa11.45□□□□□ -0.58
SNAP23-205ENST00000563333 IFNLR1Q8IU57 520 aaPredicted RBP11.43□□□□□ -0.58
SNAP23-205ENST00000563333 SPDYE2BA6NHP3 402 aa11.41□□□□□ -0.58
SNAP23-205ENST00000563333 POTEIP0CG38 1075 aa11.41□□□□□ -0.58
SNAP23-205ENST00000563333 SPDYE6P0CI01 402 aa11.41□□□□□ -0.58
SNAP23-205ENST00000563333 SPDYE2Q495Y8 402 aa11.41□□□□□ -0.58
SNAP23-205ENST00000563333 CLEC11AQ9Y240 323 aa11.39□□□□□ -0.59
SNAP23-205ENST00000563333 PLSCR2Q9NRY7 297 aa11.37□□□□□ -0.59
SNAP23-205ENST00000563333 CHADLQ6NUI6 762 aa11.36□□□□□ -0.59
SNAP23-205ENST00000563333 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
SNAP23-205ENST00000563333 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
SNAP23-205ENST00000563333 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
SNAP23-205ENST00000563333 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
SNAP23-205ENST00000563333 PKD2Q13563 968 aa11.23□□□□□ -0.61
SNAP23-205ENST00000563333 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
SNAP23-205ENST00000563333 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
SNAP23-205ENST00000563333 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
SNAP23-205ENST00000563333 PLCD3Q8N3E9 789 aa11.09□□□□□ -0.63
SNAP23-205ENST00000563333 SPOCK2Q92563 424 aa11.09□□□□□ -0.63
SNAP23-205ENST00000563333 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
SNAP23-205ENST00000563333 MIER1Q8N108 512 aa11.07□□□□□ -0.64
SNAP23-205ENST00000563333 OTUD5Q96G74 571 aa11.05□□□□□ -0.64
SNAP23-205ENST00000563333 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
SNAP23-205ENST00000563333 FARP1Q9Y4F1 1045 aaPredicted RBP11.05□□□□□ -0.64
SNAP23-205ENST00000563333 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
SNAP23-205ENST00000563333 ECM2O94769 699 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms