RNA–Protein interactions for RNA: ENST00000563127.1

KATNB1-204, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-204ENST00000563127 NISCHQ9Y2I1 1504 aa47.3■■■■■ 5.16
KATNB1-204ENST00000563127 CCDC180Q9P1Z9 1646 aa42.05■■■■■ 4.32
KATNB1-204ENST00000563127 ABCC9O60706 1549 aa41.39■■■■■ 4.22
KATNB1-204ENST00000563127 DCAF8L2P0C7V8 631 aa39.79■■■■□ 3.96
KATNB1-204ENST00000563127 RB1CC1Q8TDY2 1594 aa39.69■■■■□ 3.94
KATNB1-204ENST00000563127 NACADO15069 1562 aa39.61■■■■□ 3.93
KATNB1-204ENST00000563127 ZCCHC6Q5VYS8 1495 aaKnown RBP39.32■■■■□ 3.89
KATNB1-204ENST00000563127 MYO15BQ96JP2 1530 aa39.29■■■■□ 3.88
KATNB1-204ENST00000563127 DCAF1Q9Y4B6 1507 aa39.07■■■■□ 3.84
KATNB1-204ENST00000563127 UNC13AQ9UPW8 1703 aa38.81■■■■□ 3.8
KATNB1-204ENST00000563127 PABPN1Q86U42 306 aaKnown RBP eCLIP38.74■■■■□ 3.79
KATNB1-204ENST00000563127 BICRAQ9NZM4 1560 aa38.5■■■■□ 3.75
KATNB1-204ENST00000563127 SCRIBQ14160 1630 aa38.42■■■■□ 3.74
KATNB1-204ENST00000563127 DNAJC5BQ9UF47 199 aa38.21■■■■□ 3.71
KATNB1-204ENST00000563127 SHROOM4Q9ULL8 1493 aa38■■■■□ 3.67
KATNB1-204ENST00000563127 EIF4G1Q04637 1599 aaKnown RBP37.49■■■■□ 3.59
KATNB1-204ENST00000563127 CC2D2AQ9P2K1 1620 aa37.39■■■■□ 3.58
KATNB1-204ENST00000563127 CECR2Q9BXF3 1484 aa37.19■■■■□ 3.54
KATNB1-204ENST00000563127 SMARCA4P51532 1647 aa36.71■■■■□ 3.47
KATNB1-204ENST00000563127 BAZ1AQ9NRL2 1556 aaPredicted RBP36.66■■■■□ 3.46
KATNB1-204ENST00000563127 NCAPD3P42695 1498 aa36.58■■■■□ 3.45
KATNB1-204ENST00000563127 ATAD2BQ9ULI0 1458 aa36.58■■■■□ 3.45
KATNB1-204ENST00000563127 SMARCA2P51531 1590 aa36.5■■■■□ 3.43
KATNB1-204ENST00000563127 MROH2BQ7Z745 1585 aa36.48■■■■□ 3.43
KATNB1-204ENST00000563127 HMGXB3Q12766 1538 aa36.33■■■■□ 3.41
KATNB1-204ENST00000563127 PEG3Q9GZU2 1588 aa36.32■■■■□ 3.41
KATNB1-204ENST00000563127 BAZ1BQ9UIG0 1483 aaKnown RBP36.27■■■■□ 3.4
KATNB1-204ENST00000563127 WIZO95785 1651 aa36.08■■■■□ 3.37
KATNB1-204ENST00000563127 RSF1Q96T23 1441 aaPredicted RBP36.02■■■■□ 3.36
KATNB1-204ENST00000563127 NESP48681 1621 aa35.78■■■■□ 3.32
KATNB1-204ENST00000563127 ERCC6Q03468 1493 aa35.67■■■■□ 3.3
KATNB1-204ENST00000563127 TOP2AP11388 1531 aaKnown RBP35.63■■■■□ 3.29
KATNB1-204ENST00000563127 LAMC3Q9Y6N6 1575 aa35.6■■■■□ 3.29
KATNB1-204ENST00000563127 CADPSQ9ULU8 1353 aa35.53■■■■□ 3.28
KATNB1-204ENST00000563127 PDS5BQ9NTI5 1447 aa35.41■■■■□ 3.26
KATNB1-204ENST00000563127 KIF21AQ7Z4S6 1674 aa35.31■■■■□ 3.24
KATNB1-204ENST00000563127 CUX2O14529 1486 aa35.29■■■■□ 3.24
KATNB1-204ENST00000563127 CCDC88BA6NC98 1476 aa35.29■■■■□ 3.24
KATNB1-204ENST00000563127 CFTRP13569 1480 aa35.26■■■■□ 3.23
KATNB1-204ENST00000563127 THOC2Q8NI27 1593 aaKnown RBP35.17■■■■□ 3.22
KATNB1-204ENST00000563127 SUPT5HO00267 1087 aaKnown RBP35.14■■■■□ 3.22
KATNB1-204ENST00000563127 FANCD2Q9BXW9 1451 aa35.11■■■■□ 3.21
KATNB1-204ENST00000563127 CEP164Q9UPV0 1460 aa35.06■■■■□ 3.2
KATNB1-204ENST00000563127 MRC2Q9UBG0 1479 aa35.03■■■■□ 3.2
KATNB1-204ENST00000563127 PRDM2Q13029 1718 aa34.93■■■■□ 3.18
KATNB1-204ENST00000563127 WDR62O43379 1518 aa34.89■■■■□ 3.18
KATNB1-204ENST00000563127 URB2Q14146 1524 aaKnown RBP34.76■■■■□ 3.16
KATNB1-204ENST00000563127 TOPBP1Q92547 1522 aa34.53■■■■□ 3.12
KATNB1-204ENST00000563127 ABCC8Q09428 1581 aa34.51■■■■□ 3.12
KATNB1-204ENST00000563127 DNAJC5Q9H3Z4 198 aa34.5■■■■□ 3.11
KATNB1-204ENST00000563127 DNMBPQ6XZF7 1577 aa34.45■■■■□ 3.1
KATNB1-204ENST00000563127 IFT140Q96RY7 1462 aa34.33■■■■□ 3.09
KATNB1-204ENST00000563127 ZNF608Q9ULD9 1512 aaPredicted RBP34.22■■■■□ 3.07
KATNB1-204ENST00000563127 POLA1P09884 1462 aaPredicted RBP34.21■■■■□ 3.07
KATNB1-204ENST00000563127 CUX1P39880 1505 aa34.21■■■■□ 3.07
KATNB1-204ENST00000563127 TARBP1Q13395 1621 aaKnown RBP34.14■■■■□ 3.06
KATNB1-204ENST00000563127 SOGA1O94964 1423 aa34.13■■■■□ 3.05
KATNB1-204ENST00000563127 FGD5Q6ZNL6 1462 aa34.13■■■■□ 3.05
KATNB1-204ENST00000563127 RAD54L2Q9Y4B4 1467 aa34.12■■■■□ 3.05
KATNB1-204ENST00000563127 AQRO60306 1485 aaKnown RBP eCLIP34.05■■■■□ 3.043e-7■■■■■ 36.6
KATNB1-204ENST00000563127 EIF4G3O43432 1585 aaKnown RBP34.02■■■■□ 3.04
KATNB1-204ENST00000563127 TDRD9Q8NDG6 1382 aaKnown RBP33.98■■■■□ 3.03
KATNB1-204ENST00000563127 WRNQ14191 1432 aaPredicted RBP eCLIP33.96■■■■□ 3.03
KATNB1-204ENST00000563127 OSCARQ8IYS5 282 aa33.95■■■■□ 3.03
KATNB1-204ENST00000563127 TOP2BQ02880 1626 aa33.86■■■■□ 3.01
KATNB1-204ENST00000563127 SYNJ1O43426 1573 aa33.85■■■■□ 3.01
KATNB1-204ENST00000563127 BIVM-ERCC5R4GMW8 1640 aa33.84■■■■□ 3.01
KATNB1-204ENST00000563127 WDR97A6NE52 1622 aa33.79■■■■□ 3
KATNB1-204ENST00000563127 ABCA10Q8WWZ4 1543 aa33.77■■■■□ 3
KATNB1-204ENST00000563127 FBLN2P98095 1184 aa33.75■■■□□ 2.99
KATNB1-204ENST00000563127 GRIN2BQ13224 1484 aa33.7■■■□□ 2.99
KATNB1-204ENST00000563127 GAPVD1Q14C86 1478 aa33.7■■■□□ 2.99
KATNB1-204ENST00000563127 SNAPC4Q5SXM2 1469 aa33.67■■■□□ 2.98
KATNB1-204ENST00000563127 CHD1O14646 1710 aa33.65■■■□□ 2.98
KATNB1-204ENST00000563127 ABCA5Q8WWZ7 1642 aa33.61■■■□□ 2.97
KATNB1-204ENST00000563127 MAGI1Q96QZ7 1491 aaPredicted RBP33.61■■■□□ 2.97
KATNB1-204ENST00000563127 CHMP7Q8WUX9 453 aaPredicted RBP33.6■■■□□ 2.97
KATNB1-204ENST00000563127 PBRM1Q86U86 1689 aa33.59■■■□□ 2.97
KATNB1-204ENST00000563127 SYNJ2O15056 1496 aa33.49■■■□□ 2.95
KATNB1-204ENST00000563127 ERICH3Q5RHP9 1530 aa33.35■■■□□ 2.93
KATNB1-204ENST00000563127 TRIM41Q8WV44 630 aa33.35■■■□□ 2.93
KATNB1-204ENST00000563127 RIMBP3CA6NJZ7 1639 aa33.31■■■□□ 2.92
KATNB1-204ENST00000563127 RIMBP3BA6NNM3 1639 aa33.31■■■□□ 2.92
KATNB1-204ENST00000563127 RIMBP3Q9UFD9 1639 aa33.31■■■□□ 2.92
KATNB1-204ENST00000563127 FHAD1B1AJZ9 1412 aa33.3■■■□□ 2.92
KATNB1-204ENST00000563127 ADAMTS12P58397 1594 aa33.3■■■□□ 2.92
KATNB1-204ENST00000563127 ARHGEF11O15085 1522 aa33.28■■■□□ 2.92
KATNB1-204ENST00000563127 KIF27Q86VH2 1401 aa33.27■■■□□ 2.92
KATNB1-204ENST00000563127 GRIN2AQ12879 1464 aa33.25■■■□□ 2.91
KATNB1-204ENST00000563127 CLASP1Q7Z460 1538 aa33.24■■■□□ 2.91
KATNB1-204ENST00000563127 IGF1RP08069 1367 aa33.19■■■□□ 2.9
KATNB1-204ENST00000563127 CYB5RLQ6IPT4 315 aa33.12■■■□□ 2.89
KATNB1-204ENST00000563127 NUP160Q12769 1436 aa33.11■■■□□ 2.89
KATNB1-204ENST00000563127 CEP170Q5SW79 1584 aa33.09■■■□□ 2.89
KATNB1-204ENST00000563127 ARAP1Q96P48 1450 aa33.01■■■□□ 2.88
KATNB1-204ENST00000563127 CUL7Q14999 1698 aa33.01■■■□□ 2.87
KATNB1-204ENST00000563127 CARMIL1Q5VZK9 1371 aa32.99■■■□□ 2.87
KATNB1-204ENST00000563127 RUSC2Q8N2Y8 1516 aa32.97■■■□□ 2.87
KATNB1-204ENST00000563127 JPH4Q96JJ6 628 aa32.89■■■□□ 2.86
KATNB1-204ENST00000563127 SHROOM2Q13796 1616 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms