RNA–Protein interactions for RNA: ENST00000563063.1

AC011840.2-201, humanhuman

BASIC

Gene AC011840.2, Length 1,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.2-201ENST00000563063 NISCHQ9Y2I1 1504 aa35.4■■■■□ 3.26
AC011840.2-201ENST00000563063 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.58
AC011840.2-201ENST00000563063 ABCC9O60706 1549 aa30.06■■■□□ 2.4
AC011840.2-201ENST00000563063 ZCCHC6Q5VYS8 1495 aaKnown RBP29.63■■■□□ 2.33
AC011840.2-201ENST00000563063 DCAF8L2P0C7V8 631 aa29.35■■■□□ 2.29
AC011840.2-201ENST00000563063 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
AC011840.2-201ENST00000563063 NACADO15069 1562 aa29.17■■■□□ 2.26
AC011840.2-201ENST00000563063 MYO15BQ96JP2 1530 aa29.14■■■□□ 2.26
AC011840.2-201ENST00000563063 RB1CC1Q8TDY2 1594 aa29.09■■■□□ 2.25
AC011840.2-201ENST00000563063 SCRIBQ14160 1630 aa28.62■■■□□ 2.17
AC011840.2-201ENST00000563063 UNC13AQ9UPW8 1703 aa28.53■■■□□ 2.16
AC011840.2-201ENST00000563063 SHROOM4Q9ULL8 1493 aa28.42■■■□□ 2.14
AC011840.2-201ENST00000563063 BICRAQ9NZM4 1560 aa28.25■■■□□ 2.11
AC011840.2-201ENST00000563063 PABPN1Q86U42 306 aaKnown RBP eCLIP28.18■■■□□ 2.1
AC011840.2-201ENST00000563063 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
AC011840.2-201ENST00000563063 EIF4G1Q04637 1599 aaKnown RBP27.44■■□□□ 1.98
AC011840.2-201ENST00000563063 BAZ1AQ9NRL2 1556 aaPredicted RBP27.38■■□□□ 1.97
AC011840.2-201ENST00000563063 SMARCA4P51532 1647 aa27.37■■□□□ 1.97
AC011840.2-201ENST00000563063 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
AC011840.2-201ENST00000563063 RSF1Q96T23 1441 aaPredicted RBP27.2■■□□□ 1.94
AC011840.2-201ENST00000563063 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.94
AC011840.2-201ENST00000563063 WIZO95785 1651 aa27.09■■□□□ 1.93
AC011840.2-201ENST00000563063 ATAD2BQ9ULI0 1458 aa27.06■■□□□ 1.92
AC011840.2-201ENST00000563063 DNAJC5BQ9UF47 199 aa27.06■■□□□ 1.92
AC011840.2-201ENST00000563063 PEG3Q9GZU2 1588 aa27.05■■□□□ 1.92
AC011840.2-201ENST00000563063 SMARCA2P51531 1590 aa27.03■■□□□ 1.92
AC011840.2-201ENST00000563063 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
AC011840.2-201ENST00000563063 NCAPD3P42695 1498 aa26.91■■□□□ 1.9
AC011840.2-201ENST00000563063 BAZ1BQ9UIG0 1483 aaKnown RBP26.87■■□□□ 1.89
AC011840.2-201ENST00000563063 HMGXB3Q12766 1538 aa26.86■■□□□ 1.89
AC011840.2-201ENST00000563063 TOP2AP11388 1531 aaKnown RBP26.79■■□□□ 1.88
AC011840.2-201ENST00000563063 CCDC88BA6NC98 1476 aa26.47■■□□□ 1.83
AC011840.2-201ENST00000563063 NESP48681 1621 aa26.2■■□□□ 1.78
AC011840.2-201ENST00000563063 CADPSQ9ULU8 1353 aa26.17■■□□□ 1.78
AC011840.2-201ENST00000563063 CFTRP13569 1480 aa26.15■■□□□ 1.78
AC011840.2-201ENST00000563063 LAMC3Q9Y6N6 1575 aa26.13■■□□□ 1.77
AC011840.2-201ENST00000563063 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
AC011840.2-201ENST00000563063 PDS5BQ9NTI5 1447 aa25.91■■□□□ 1.74
AC011840.2-201ENST00000563063 FANCD2Q9BXW9 1451 aa25.91■■□□□ 1.74
AC011840.2-201ENST00000563063 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
AC011840.2-201ENST00000563063 ERCC6Q03468 1493 aa25.84■■□□□ 1.73
AC011840.2-201ENST00000563063 CEP164Q9UPV0 1460 aa25.81■■□□□ 1.72
AC011840.2-201ENST00000563063 ABCC8Q09428 1581 aa25.75■■□□□ 1.71
AC011840.2-201ENST00000563063 THOC2Q8NI27 1593 aaKnown RBP25.66■■□□□ 1.7
AC011840.2-201ENST00000563063 MRC2Q9UBG0 1479 aa25.66■■□□□ 1.7
AC011840.2-201ENST00000563063 URB2Q14146 1524 aaKnown RBP25.65■■□□□ 1.7
AC011840.2-201ENST00000563063 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.69
AC011840.2-201ENST00000563063 CUX1P39880 1505 aa25.62■■□□□ 1.69
AC011840.2-201ENST00000563063 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
AC011840.2-201ENST00000563063 DNMBPQ6XZF7 1577 aa25.58■■□□□ 1.69
AC011840.2-201ENST00000563063 WDR62O43379 1518 aa25.56■■□□□ 1.68
AC011840.2-201ENST00000563063 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
AC011840.2-201ENST00000563063 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
AC011840.2-201ENST00000563063 BIVM-ERCC5R4GMW8 1640 aa25.51■■□□□ 1.67
AC011840.2-201ENST00000563063 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
AC011840.2-201ENST00000563063 FGD5Q6ZNL6 1462 aa25.42■■□□□ 1.66
AC011840.2-201ENST00000563063 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
AC011840.2-201ENST00000563063 TRIM41Q8WV44 630 aa25.38■■□□□ 1.65
AC011840.2-201ENST00000563063 CUX2O14529 1486 aa25.33■■□□□ 1.65
AC011840.2-201ENST00000563063 RAD54L2Q9Y4B4 1467 aa25.3■■□□□ 1.64
AC011840.2-201ENST00000563063 SOGA1O94964 1423 aa25.25■■□□□ 1.63
AC011840.2-201ENST00000563063 TARBP1Q13395 1621 aaKnown RBP25.25■■□□□ 1.63
AC011840.2-201ENST00000563063 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
AC011840.2-201ENST00000563063 WDR97A6NE52 1622 aa25.2■■□□□ 1.63
AC011840.2-201ENST00000563063 ABCA10Q8WWZ4 1543 aa25.17■■□□□ 1.62
AC011840.2-201ENST00000563063 ZNF608Q9ULD9 1512 aaPredicted RBP25.14■■□□□ 1.62
AC011840.2-201ENST00000563063 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
AC011840.2-201ENST00000563063 EIF4G3O43432 1585 aaKnown RBP25.07■■□□□ 1.6
AC011840.2-201ENST00000563063 ABCA5Q8WWZ7 1642 aa25.06■■□□□ 1.6
AC011840.2-201ENST00000563063 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
AC011840.2-201ENST00000563063 AQRO60306 1485 aaKnown RBP eCLIP25.05■■□□□ 1.6
AC011840.2-201ENST00000563063 KIF27Q86VH2 1401 aa25.02■■□□□ 1.6
AC011840.2-201ENST00000563063 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
AC011840.2-201ENST00000563063 PBRM1Q86U86 1689 aa24.96■■□□□ 1.59
AC011840.2-201ENST00000563063 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
AC011840.2-201ENST00000563063 GRIN2BQ13224 1484 aa24.9■■□□□ 1.58
AC011840.2-201ENST00000563063 EEA1Q15075 1411 aa24.88■■□□□ 1.57
AC011840.2-201ENST00000563063 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
AC011840.2-201ENST00000563063 IGF1RP08069 1367 aa24.85■■□□□ 1.57
AC011840.2-201ENST00000563063 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
AC011840.2-201ENST00000563063 ADAMTS12P58397 1594 aa24.79■■□□□ 1.56
AC011840.2-201ENST00000563063 CSRNP3Q8WYN3 585 aa24.77■■□□□ 1.56
AC011840.2-201ENST00000563063 CUL7Q14999 1698 aa24.77■■□□□ 1.56
AC011840.2-201ENST00000563063 MAGI1Q96QZ7 1491 aaPredicted RBP24.77■■□□□ 1.56
AC011840.2-201ENST00000563063 CARMIL1Q5VZK9 1371 aa24.72■■□□□ 1.55
AC011840.2-201ENST00000563063 FHAD1B1AJZ9 1412 aa24.71■■□□□ 1.55
AC011840.2-201ENST00000563063 PRXQ9BXM0 1461 aa24.7■■□□□ 1.54
AC011840.2-201ENST00000563063 SYNJ2O15056 1496 aa24.67■■□□□ 1.54
AC011840.2-201ENST00000563063 KIF21BO75037 1637 aa24.65■■□□□ 1.54
AC011840.2-201ENST00000563063 CHD1O14646 1710 aa24.65■■□□□ 1.54
AC011840.2-201ENST00000563063 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.53
AC011840.2-201ENST00000563063 EHMT2Q96KQ7 1210 aa24.63■■□□□ 1.53
AC011840.2-201ENST00000563063 FBLN2P98095 1184 aa24.61■■□□□ 1.53
AC011840.2-201ENST00000563063 GRIN2AQ12879 1464 aa24.61■■□□□ 1.53
AC011840.2-201ENST00000563063 CHMP7Q8WUX9 453 aaPredicted RBP24.6■■□□□ 1.53
AC011840.2-201ENST00000563063 GOLGA3Q08378 1498 aa24.54■■□□□ 1.52
AC011840.2-201ENST00000563063 CEP170Q5SW79 1584 aa24.49■■□□□ 1.51
AC011840.2-201ENST00000563063 LOC105371045A0A1W2PR82 267 aa24.46■■□□□ 1.51
AC011840.2-201ENST00000563063 NUP160Q12769 1436 aa24.45■■□□□ 1.51
AC011840.2-201ENST00000563063 CTTNBP2Q8WZ74 1663 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 1475.3 ms