RNA–Protein interactions for RNA: ENST00000563048.5

USP10-207, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 2

Gene USP10, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-207ENST00000563048 QKIQ96PU8 341 aaKnown RBP eCLIP11.7□□□□□ -0.548e-16■■■■■ 60.1
USP10-207ENST00000563048 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.8□□□□□ -0.685e-12■■■□□ 16.6
USP10-207ENST00000563048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.72■□□□□ 0.592e-11■■□□□ 14.4
USP10-207ENST00000563048 NCBP2P52298 156 aaKnown RBP eCLIP10.79□□□□□ -0.683e-11■■■□□ 15.5
USP10-207ENST00000563048 PRPF4O43172 522 aaKnown RBP eCLIP11.26□□□□□ -0.618e-11■■□□□ 14.2
USP10-207ENST00000563048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.09□□□□□ -0.312e-10■□□□□ 10.8
USP10-207ENST00000563048 MATR3P43243 847 aaKnown RBP eCLIP13.03□□□□□ -0.325e-10■■□□□ 14.2
USP10-207ENST00000563048 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.11□□□□□ -0.639e-10■□□□□ 9.6
USP10-207ENST00000563048 RBM22Q9NW64 420 aaKnown RBP eCLIP11.88□□□□□ -0.514e-9■■■■■ 32
USP10-207ENST00000563048 HNRNPKP61978 463 aaKnown RBP eCLIP12.1□□□□□ -0.474e-9■■■■■ 29.8
USP10-207ENST00000563048 HNRNPLP14866 589 aaKnown RBP eCLIP12.73□□□□□ -0.378e-9■□□□□ 10.1
USP10-207ENST00000563048 PTBP1P26599 531 aaKnown RBP eCLIP8.86□□□□□ -0.991e-8■■■■■ 44.7
USP10-207ENST00000563048 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.18□□□□□ -0.623e-8■■■■■ 116
USP10-207ENST00000563048 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.48□□□□□ -0.574e-8■■■■■ 70.2
USP10-207ENST00000563048 NKRFO15226 690 aaKnown RBP eCLIP13.91□□□□□ -0.185e-8■□□□□ 10
USP10-207ENST00000563048 KHSRPQ92945 711 aaKnown RBP eCLIP13.7□□□□□ -0.226e-8■■■□□ 18.4
USP10-207ENST00000563048 RPS3P23396 243 aaKnown RBP eCLIP11.4□□□□□ -0.581e-7■□□□□ 10.8
USP10-207ENST00000563048 RBM15Q96T37 977 aaKnown RBP eCLIP11.98□□□□□ -0.491e-7■■■□□ 14.6
USP10-207ENST00000563048 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.09□□□□□ -0.151e-7■□□□□ 9.9
USP10-207ENST00000563048 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.98□□□□□ -0.651e-7■□□□□ 10.2
USP10-207ENST00000563048 SF3B4Q15427 424 aaKnown RBP eCLIP10.77□□□□□ -0.692e-7■■■■□ 25.7
USP10-207ENST00000563048 LARP4Q71RC2 724 aaKnown RBP eCLIP10.82□□□□□ -0.682e-7■□□□□ 9
USP10-207ENST00000563048 U2AF2P26368 475 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■□□□ 13.3
USP10-207ENST00000563048 DDX3XO00571 662 aaKnown RBP eCLIP12.03□□□□□ -0.483e-7■■□□□ 11.9
USP10-207ENST00000563048 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.54□□□□□ -0.724e-7■■■■■ 58.1
USP10-207ENST00000563048 DKC1O60832 514 aaKnown RBP eCLIP13.29□□□□□ -0.284e-7■■■■■ 32.2
USP10-207ENST00000563048 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.23□□□□□ -0.134e-7■□□□□ 11.2
USP10-207ENST00000563048 SRSF1Q07955 248 aaKnown RBP eCLIP11.67□□□□□ -0.545e-7■■■■□ 25.1
USP10-207ENST00000563048 HNRNPMP52272 730 aaKnown RBP eCLIP19.35■□□□□ 0.695e-7■■■■□ 22.5
USP10-207ENST00000563048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.375e-7■■■■■ 56.3
USP10-207ENST00000563048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.42■□□□□ 0.225e-7■■□□□ 12.1
USP10-207ENST00000563048 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.52□□□□□ -0.086e-7■■■□□ 16.3
USP10-207ENST00000563048 YBX3P16989 372 aaKnown RBP eCLIP16.43■□□□□ 0.227e-7■■■■□ 23.6
USP10-207ENST00000563048 EFTUD2Q15029 972 aaKnown RBP eCLIP11.1□□□□□ -0.637e-7■■□□□ 11.6
USP10-207ENST00000563048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.62□□□□□ -0.717e-7■■■■□ 25.2
USP10-207ENST00000563048 DDX6P26196 483 aaKnown RBP eCLIP12.76□□□□□ -0.378e-7■■■□□ 14.6
USP10-207ENST00000563048 EIF4G2P78344 907 aaKnown RBP eCLIP16.51■□□□□ 0.238e-7■■■■□ 22.3
USP10-207ENST00000563048 AQRO60306 1485 aaKnown RBP eCLIP21.91■■□□□ 1.19e-7■■■■■ 27.8
USP10-207ENST00000563048 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.27□□□□□ -0.939e-7■■■■■ 48.3
USP10-207ENST00000563048 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■□□ 16.3
USP10-207ENST00000563048 HNRNPCP07910 306 aaKnown RBP eCLIP8.61□□□□□ -1.031e-6■■□□□ 11.5
USP10-207ENST00000563048 ZNF622Q969S3 477 aaKnown RBP eCLIP15.93■□□□□ 0.141e-6■□□□□ 9.2
USP10-207ENST00000563048 GTF2F1P35269 517 aaKnown RBP eCLIP13.62□□□□□ -0.231e-6■■□□□ 14.1
USP10-207ENST00000563048 FMR1Q06787 632 aaKnown RBP eCLIP15.62■□□□□ 0.091e-6■■□□□ 11.9
USP10-207ENST00000563048 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.69□□□□□ -0.061e-6■■■□□ 17.9
USP10-207ENST00000563048 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.77□□□□□ -0.531e-6■□□□□ 10.5
USP10-207ENST00000563048 PPIGQ13427 754 aaKnown RBP eCLIP14.01□□□□□ -0.171e-6■■□□□ 13.5
USP10-207ENST00000563048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.9■□□□□ 0.781e-6■■■□□ 18.3
USP10-207ENST00000563048 PCBP2Q15366 365 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■■□□□ 12.4
USP10-207ENST00000563048 TARDBPQ13148 414 aaKnown RBP eCLIP12.2□□□□□ -0.461e-6■■■□□ 16.2
USP10-207ENST00000563048 GPKOWQ92917 476 aaPredicted RBP eCLIP13.93□□□□□ -0.182e-6■■■■■ 37.1
USP10-207ENST00000563048 BCCIPQ9P287 314 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■□□□ 13.3
USP10-207ENST00000563048 SF3B1O75533 1304 aaKnown RBP eCLIP13.16□□□□□ -0.32e-6■■■■■ 56.9
USP10-207ENST00000563048 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.94□□□□□ -0.023e-6■■■■□ 21.3
USP10-207ENST00000563048 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.39□□□□□ -0.113e-6■■□□□ 14.1
USP10-207ENST00000563048 GRSF1Q12849 480 aaKnown RBP eCLIP12.75□□□□□ -0.374e-6■■□□□ 12
USP10-207ENST00000563048 G3BP1Q13283 466 aaKnown RBP eCLIP14.74□□□□□ -0.054e-6■■□□□ 13.9
USP10-207ENST00000563048 PCBP1Q15365 356 aaKnown RBP eCLIP13.19□□□□□ -0.34e-6■■■□□ 14.8
USP10-207ENST00000563048 SF3A3Q12874 501 aaKnown RBP eCLIP10.25□□□□□ -0.774e-6■□□□□ 9.9
USP10-207ENST00000563048 LSM11P83369 360 aaKnown RBP eCLIP10.35□□□□□ -0.756e-6■■□□□ 14.5
USP10-207ENST00000563048 PUS1Q9Y606 427 aaKnown RBP eCLIP8.74□□□□□ -1.011e-5■■■■■ 49.7
Retrieved 61 of 61 RNA–protein pairs in 52.5 ms