RNA–Protein interactions for RNA: ENST00000562900.1

AC009035.1-201, humanhuman

TSL 3 BASIC

Gene AC009035.1, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009035.1-201ENST00000562900 NISCHQ9Y2I1 1504 aa27.62■■■□□ 2.01
AC009035.1-201ENST00000562900 CCDC180Q9P1Z9 1646 aa24.71■■□□□ 1.55
AC009035.1-201ENST00000562900 ABCC9O60706 1549 aa24.12■■□□□ 1.45
AC009035.1-201ENST00000562900 RB1CC1Q8TDY2 1594 aa23.23■■□□□ 1.31
AC009035.1-201ENST00000562900 NACADO15069 1562 aa23.16■■□□□ 1.3
AC009035.1-201ENST00000562900 ZCCHC6Q5VYS8 1495 aaKnown RBP23.02■■□□□ 1.28
AC009035.1-201ENST00000562900 DCAF8L2P0C7V8 631 aa23.01■■□□□ 1.27
AC009035.1-201ENST00000562900 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
AC009035.1-201ENST00000562900 DCAF1Q9Y4B6 1507 aa22.86■■□□□ 1.25
AC009035.1-201ENST00000562900 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
AC009035.1-201ENST00000562900 SCRIBQ14160 1630 aa22.51■■□□□ 1.19
AC009035.1-201ENST00000562900 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
AC009035.1-201ENST00000562900 PABPN1Q86U42 306 aaKnown RBP eCLIP22.44■■□□□ 1.18
AC009035.1-201ENST00000562900 SHROOM4Q9ULL8 1493 aa22.27■■□□□ 1.16
AC009035.1-201ENST00000562900 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
AC009035.1-201ENST00000562900 EIF4G1Q04637 1599 aaKnown RBP21.92■■□□□ 1.1
AC009035.1-201ENST00000562900 CC2D2AQ9P2K1 1620 aa21.86■■□□□ 1.09
AC009035.1-201ENST00000562900 CECR2Q9BXF3 1484 aa21.67■■□□□ 1.06
AC009035.1-201ENST00000562900 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
AC009035.1-201ENST00000562900 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.02
AC009035.1-201ENST00000562900 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
AC009035.1-201ENST00000562900 ATAD2BQ9ULI0 1458 aa21.32■■□□□ 1
AC009035.1-201ENST00000562900 NCAPD3P42695 1498 aa21.29■■□□□ 1
AC009035.1-201ENST00000562900 HMGXB3Q12766 1538 aa21.28■■□□□ 1
AC009035.1-201ENST00000562900 MROH2BQ7Z745 1585 aa21.27■■□□□ 1
AC009035.1-201ENST00000562900 PEG3Q9GZU2 1588 aa21.27■□□□□ 0.99
AC009035.1-201ENST00000562900 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
AC009035.1-201ENST00000562900 WIZO95785 1651 aa21.12■□□□□ 0.97
AC009035.1-201ENST00000562900 RSF1Q96T23 1441 aaPredicted RBP20.96■□□□□ 0.95
AC009035.1-201ENST00000562900 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
AC009035.1-201ENST00000562900 NESP48681 1621 aa20.85■□□□□ 0.93
AC009035.1-201ENST00000562900 LAMC3Q9Y6N6 1575 aa20.84■□□□□ 0.93
AC009035.1-201ENST00000562900 ERCC6Q03468 1493 aa20.82■□□□□ 0.92
AC009035.1-201ENST00000562900 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
AC009035.1-201ENST00000562900 CADPSQ9ULU8 1353 aa20.66■□□□□ 0.9
AC009035.1-201ENST00000562900 THOC2Q8NI27 1593 aaKnown RBP20.63■□□□□ 0.89
AC009035.1-201ENST00000562900 PDS5BQ9NTI5 1447 aa20.63■□□□□ 0.89
AC009035.1-201ENST00000562900 PRDM2Q13029 1718 aa20.63■□□□□ 0.89
AC009035.1-201ENST00000562900 CUX2O14529 1486 aa20.61■□□□□ 0.89
AC009035.1-201ENST00000562900 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
AC009035.1-201ENST00000562900 CFTRP13569 1480 aa20.56■□□□□ 0.88
AC009035.1-201ENST00000562900 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
AC009035.1-201ENST00000562900 FANCD2Q9BXW9 1451 aa20.49■□□□□ 0.87
AC009035.1-201ENST00000562900 MRC2Q9UBG0 1479 aa20.47■□□□□ 0.87
AC009035.1-201ENST00000562900 WDR62O43379 1518 aa20.42■□□□□ 0.86
AC009035.1-201ENST00000562900 SUPT5HO00267 1087 aaKnown RBP20.38■□□□□ 0.85
AC009035.1-201ENST00000562900 URB2Q14146 1524 aaKnown RBP20.28■□□□□ 0.84
AC009035.1-201ENST00000562900 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
AC009035.1-201ENST00000562900 TOPBP1Q92547 1522 aa20.16■□□□□ 0.82
AC009035.1-201ENST00000562900 ABCC8Q09428 1581 aa20.14■□□□□ 0.81
AC009035.1-201ENST00000562900 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
AC009035.1-201ENST00000562900 CUX1P39880 1505 aa19.99■□□□□ 0.79
AC009035.1-201ENST00000562900 POLA1P09884 1462 aaPredicted RBP19.98■□□□□ 0.79
AC009035.1-201ENST00000562900 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
AC009035.1-201ENST00000562900 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
AC009035.1-201ENST00000562900 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
AC009035.1-201ENST00000562900 FGD5Q6ZNL6 1462 aa19.93■□□□□ 0.78
AC009035.1-201ENST00000562900 DNAJC5Q9H3Z4 198 aa19.92■□□□□ 0.78
AC009035.1-201ENST00000562900 WDR97A6NE52 1622 aa19.87■□□□□ 0.77
AC009035.1-201ENST00000562900 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
AC009035.1-201ENST00000562900 RAD54L2Q9Y4B4 1467 aa19.86■□□□□ 0.77
AC009035.1-201ENST00000562900 SOGA1O94964 1423 aa19.85■□□□□ 0.77
AC009035.1-201ENST00000562900 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
AC009035.1-201ENST00000562900 SYNJ1O43426 1573 aa19.83■□□□□ 0.76
AC009035.1-201ENST00000562900 WRNQ14191 1432 aaPredicted RBP eCLIP19.81■□□□□ 0.76
AC009035.1-201ENST00000562900 AQRO60306 1485 aaKnown RBP eCLIP19.79■□□□□ 0.76
AC009035.1-201ENST00000562900 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
AC009035.1-201ENST00000562900 CHD1O14646 1710 aa19.77■□□□□ 0.76
AC009035.1-201ENST00000562900 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
AC009035.1-201ENST00000562900 ABCA10Q8WWZ4 1543 aa19.72■□□□□ 0.75
AC009035.1-201ENST00000562900 ABCA5Q8WWZ7 1642 aa19.72■□□□□ 0.75
AC009035.1-201ENST00000562900 SNAPC4Q5SXM2 1469 aa19.67■□□□□ 0.74
AC009035.1-201ENST00000562900 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
AC009035.1-201ENST00000562900 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
AC009035.1-201ENST00000562900 MAGI1Q96QZ7 1491 aaPredicted RBP19.64■□□□□ 0.73
AC009035.1-201ENST00000562900 OSCARQ8IYS5 282 aa19.63■□□□□ 0.73
AC009035.1-201ENST00000562900 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
AC009035.1-201ENST00000562900 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
AC009035.1-201ENST00000562900 FBLN2P98095 1184 aa19.55■□□□□ 0.72
AC009035.1-201ENST00000562900 ERICH3Q5RHP9 1530 aa19.51■□□□□ 0.71
AC009035.1-201ENST00000562900 RIMBP3CA6NJZ7 1639 aa19.48■□□□□ 0.71
AC009035.1-201ENST00000562900 RIMBP3BA6NNM3 1639 aa19.48■□□□□ 0.71
AC009035.1-201ENST00000562900 RIMBP3Q9UFD9 1639 aa19.48■□□□□ 0.71
AC009035.1-201ENST00000562900 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
AC009035.1-201ENST00000562900 CLASP1Q7Z460 1538 aa19.46■□□□□ 0.71
AC009035.1-201ENST00000562900 ARHGEF11O15085 1522 aa19.44■□□□□ 0.7
AC009035.1-201ENST00000562900 GRIN2AQ12879 1464 aa19.42■□□□□ 0.7
AC009035.1-201ENST00000562900 FHAD1B1AJZ9 1412 aa19.42■□□□□ 0.7
AC009035.1-201ENST00000562900 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
AC009035.1-201ENST00000562900 CUL7Q14999 1698 aa19.4■□□□□ 0.7
AC009035.1-201ENST00000562900 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
AC009035.1-201ENST00000562900 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
AC009035.1-201ENST00000562900 NUP160Q12769 1436 aa19.31■□□□□ 0.68
AC009035.1-201ENST00000562900 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
AC009035.1-201ENST00000562900 RUSC2Q8N2Y8 1516 aa19.26■□□□□ 0.67
AC009035.1-201ENST00000562900 IGF1RP08069 1367 aa19.25■□□□□ 0.67
AC009035.1-201ENST00000562900 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
AC009035.1-201ENST00000562900 CARMIL1Q5VZK9 1371 aa19.18■□□□□ 0.66
AC009035.1-201ENST00000562900 ERCC6L2Q5T890 1561 aa19.17■□□□□ 0.66
AC009035.1-201ENST00000562900 CYB5RLQ6IPT4 315 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms