RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 NISCHQ9Y2I1 1504 aa32.61■■■□□ 2.81
AC009055.1-201ENST00000562656 CCDC180Q9P1Z9 1646 aa29.23■■■□□ 2.27
AC009055.1-201ENST00000562656 ABCC9O60706 1549 aa28.95■■■□□ 2.23
AC009055.1-201ENST00000562656 RB1CC1Q8TDY2 1594 aa27.72■■■□□ 2.03
AC009055.1-201ENST00000562656 NACADO15069 1562 aa27.59■■■□□ 2.01
AC009055.1-201ENST00000562656 DCAF8L2P0C7V8 631 aa27.36■■□□□ 1.97
AC009055.1-201ENST00000562656 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
AC009055.1-201ENST00000562656 ZCCHC6Q5VYS8 1495 aaKnown RBP27.06■■□□□ 1.92
AC009055.1-201ENST00000562656 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
AC009055.1-201ENST00000562656 DCAF1Q9Y4B6 1507 aa27.01■■□□□ 1.91
AC009055.1-201ENST00000562656 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
AC009055.1-201ENST00000562656 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
AC009055.1-201ENST00000562656 BICRAQ9NZM4 1560 aa26.86■■□□□ 1.89
AC009055.1-201ENST00000562656 SHROOM4Q9ULL8 1493 aa26.63■■□□□ 1.85
AC009055.1-201ENST00000562656 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
AC009055.1-201ENST00000562656 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.78
AC009055.1-201ENST00000562656 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
AC009055.1-201ENST00000562656 CECR2Q9BXF3 1484 aa26.1■■□□□ 1.77
AC009055.1-201ENST00000562656 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
AC009055.1-201ENST00000562656 SMARCA4P51532 1647 aa25.39■■□□□ 1.66
AC009055.1-201ENST00000562656 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
AC009055.1-201ENST00000562656 SMARCA2P51531 1590 aa25.34■■□□□ 1.65
AC009055.1-201ENST00000562656 BAZ1AQ9NRL2 1556 aaPredicted RBP25.32■■□□□ 1.64
AC009055.1-201ENST00000562656 HMGXB3Q12766 1538 aa25.28■■□□□ 1.64
AC009055.1-201ENST00000562656 PEG3Q9GZU2 1588 aa25.19■■□□□ 1.62
AC009055.1-201ENST00000562656 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.61
AC009055.1-201ENST00000562656 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
AC009055.1-201ENST00000562656 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
AC009055.1-201ENST00000562656 CUX2O14529 1486 aa24.96■■□□□ 1.59
AC009055.1-201ENST00000562656 NESP48681 1621 aa24.91■■□□□ 1.58
AC009055.1-201ENST00000562656 LAMC3Q9Y6N6 1575 aa24.86■■□□□ 1.57
AC009055.1-201ENST00000562656 WIZO95785 1651 aa24.79■■□□□ 1.56
AC009055.1-201ENST00000562656 DNAJC5Q9H3Z4 198 aa24.72■■□□□ 1.55
AC009055.1-201ENST00000562656 PDS5BQ9NTI5 1447 aa24.7■■□□□ 1.55
AC009055.1-201ENST00000562656 CADPSQ9ULU8 1353 aa24.67■■□□□ 1.54
AC009055.1-201ENST00000562656 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
AC009055.1-201ENST00000562656 RSF1Q96T23 1441 aaPredicted RBP24.65■■□□□ 1.54
AC009055.1-201ENST00000562656 KIF21AQ7Z4S6 1674 aa24.62■■□□□ 1.53
AC009055.1-201ENST00000562656 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
AC009055.1-201ENST00000562656 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
AC009055.1-201ENST00000562656 CFTRP13569 1480 aa24.44■■□□□ 1.5
AC009055.1-201ENST00000562656 WDR62O43379 1518 aa24.4■■□□□ 1.5
AC009055.1-201ENST00000562656 CEP164Q9UPV0 1460 aa24.39■■□□□ 1.5
AC009055.1-201ENST00000562656 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
AC009055.1-201ENST00000562656 CCDC88BA6NC98 1476 aa24.23■■□□□ 1.47
AC009055.1-201ENST00000562656 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
AC009055.1-201ENST00000562656 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
AC009055.1-201ENST00000562656 ABCC8Q09428 1581 aa23.97■■□□□ 1.43
AC009055.1-201ENST00000562656 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
AC009055.1-201ENST00000562656 IFT140Q96RY7 1462 aa23.92■■□□□ 1.42
AC009055.1-201ENST00000562656 DNMBPQ6XZF7 1577 aa23.87■■□□□ 1.41
AC009055.1-201ENST00000562656 OSCARQ8IYS5 282 aa23.83■■□□□ 1.41
AC009055.1-201ENST00000562656 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
AC009055.1-201ENST00000562656 TARBP1Q13395 1621 aaKnown RBP23.71■■□□□ 1.39
AC009055.1-201ENST00000562656 EIF4G3O43432 1585 aaKnown RBP23.7■■□□□ 1.38
AC009055.1-201ENST00000562656 POLA1P09884 1462 aaPredicted RBP23.7■■□□□ 1.38
AC009055.1-201ENST00000562656 SUPT5HO00267 1087 aaKnown RBP23.62■■□□□ 1.37
AC009055.1-201ENST00000562656 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
AC009055.1-201ENST00000562656 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.37
AC009055.1-201ENST00000562656 SOGA1O94964 1423 aa23.6■■□□□ 1.37
AC009055.1-201ENST00000562656 FGD5Q6ZNL6 1462 aa23.56■■□□□ 1.36
AC009055.1-201ENST00000562656 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
AC009055.1-201ENST00000562656 WDR97A6NE52 1622 aa23.56■■□□□ 1.36
AC009055.1-201ENST00000562656 CUX1P39880 1505 aa23.56■■□□□ 1.36
AC009055.1-201ENST00000562656 TDRD9Q8NDG6 1382 aaKnown RBP23.49■■□□□ 1.35
AC009055.1-201ENST00000562656 CHD1O14646 1710 aa23.48■■□□□ 1.35
AC009055.1-201ENST00000562656 RIMBP3CA6NJZ7 1639 aa23.47■■□□□ 1.35
AC009055.1-201ENST00000562656 RIMBP3BA6NNM3 1639 aa23.47■■□□□ 1.35
AC009055.1-201ENST00000562656 RIMBP3Q9UFD9 1639 aa23.47■■□□□ 1.35
AC009055.1-201ENST00000562656 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
AC009055.1-201ENST00000562656 FBLN2P98095 1184 aa23.4■■□□□ 1.34
AC009055.1-201ENST00000562656 GRIN2BQ13224 1484 aa23.39■■□□□ 1.34
AC009055.1-201ENST00000562656 SNAPC4Q5SXM2 1469 aa23.38■■□□□ 1.33
AC009055.1-201ENST00000562656 MAGI1Q96QZ7 1491 aaPredicted RBP23.38■■□□□ 1.33
AC009055.1-201ENST00000562656 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
AC009055.1-201ENST00000562656 GAPVD1Q14C86 1478 aa23.31■■□□□ 1.32
AC009055.1-201ENST00000562656 CHMP7Q8WUX9 453 aaPredicted RBP23.3■■□□□ 1.32
AC009055.1-201ENST00000562656 SYNJ2O15056 1496 aa23.3■■□□□ 1.32
AC009055.1-201ENST00000562656 PBRM1Q86U86 1689 aa23.28■■□□□ 1.32
AC009055.1-201ENST00000562656 WRNQ14191 1432 aaPredicted RBP eCLIP23.28■■□□□ 1.32
AC009055.1-201ENST00000562656 ABCA5Q8WWZ7 1642 aa23.28■■□□□ 1.32
AC009055.1-201ENST00000562656 BIVM-ERCC5R4GMW8 1640 aa23.28■■□□□ 1.32
AC009055.1-201ENST00000562656 TOP2BQ02880 1626 aa23.27■■□□□ 1.32
AC009055.1-201ENST00000562656 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
AC009055.1-201ENST00000562656 CLASP1Q7Z460 1538 aa23.24■■□□□ 1.31
AC009055.1-201ENST00000562656 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
AC009055.1-201ENST00000562656 ARAP1Q96P48 1450 aa23.19■■□□□ 1.3
AC009055.1-201ENST00000562656 ADAMTS12P58397 1594 aa23.07■■□□□ 1.28
AC009055.1-201ENST00000562656 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
AC009055.1-201ENST00000562656 ERICH3Q5RHP9 1530 aa23.07■■□□□ 1.28
AC009055.1-201ENST00000562656 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
AC009055.1-201ENST00000562656 NUP160Q12769 1436 aa23.01■■□□□ 1.27
AC009055.1-201ENST00000562656 CEP170Q5SW79 1584 aa22.96■■□□□ 1.27
AC009055.1-201ENST00000562656 SHROOM2Q13796 1616 aa22.89■■□□□ 1.25
AC009055.1-201ENST00000562656 TRHP20396 242 aaPredicted RBP22.88■■□□□ 1.25
AC009055.1-201ENST00000562656 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
AC009055.1-201ENST00000562656 KIF27Q86VH2 1401 aa22.82■■□□□ 1.24
AC009055.1-201ENST00000562656 IGF1RP08069 1367 aa22.78■■□□□ 1.24
AC009055.1-201ENST00000562656 JPH4Q96JJ6 628 aa22.76■■□□□ 1.23
AC009055.1-201ENST00000562656 CUL7Q14999 1698 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 202.5 ms