RNA–Protein interactions for RNA: ENST00000562641.1

YPEL3-203, Transcript of yippee like 3, humanhuman

TSL 3 BASIC

Gene YPEL3, Length 1,941 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL3-203ENST00000562641 NISCHQ9Y2I1 1504 aa38.55■■■■□ 3.76
YPEL3-203ENST00000562641 CCDC180Q9P1Z9 1646 aa33.78■■■■□ 3
YPEL3-203ENST00000562641 ABCC9O60706 1549 aa32.43■■■□□ 2.78
YPEL3-203ENST00000562641 ZCCHC6Q5VYS8 1495 aaKnown RBP32.3■■■□□ 2.76
YPEL3-203ENST00000562641 DCAF8L2P0C7V8 631 aa32.04■■■□□ 2.72
YPEL3-203ENST00000562641 DCAF1Q9Y4B6 1507 aa31.92■■■□□ 2.7
YPEL3-203ENST00000562641 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.66
YPEL3-203ENST00000562641 NACADO15069 1562 aa31.6■■■□□ 2.65
YPEL3-203ENST00000562641 RB1CC1Q8TDY2 1594 aa31.41■■■□□ 2.62
YPEL3-203ENST00000562641 SHROOM4Q9ULL8 1493 aa31.17■■■□□ 2.58
YPEL3-203ENST00000562641 SCRIBQ14160 1630 aa30.97■■■□□ 2.55
YPEL3-203ENST00000562641 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.51
YPEL3-203ENST00000562641 BICRAQ9NZM4 1560 aa30.48■■■□□ 2.47
YPEL3-203ENST00000562641 PABPN1Q86U42 306 aaKnown RBP eCLIP30.35■■■□□ 2.45
YPEL3-203ENST00000562641 CECR2Q9BXF3 1484 aa29.91■■■□□ 2.38
YPEL3-203ENST00000562641 SUPT5HO00267 1087 aaKnown RBP29.9■■■□□ 2.38
YPEL3-203ENST00000562641 BAZ1AQ9NRL2 1556 aaPredicted RBP29.84■■■□□ 2.37
YPEL3-203ENST00000562641 RSF1Q96T23 1441 aaPredicted RBP29.76■■■□□ 2.35
YPEL3-203ENST00000562641 MROH2BQ7Z745 1585 aa29.72■■■□□ 2.35
YPEL3-203ENST00000562641 SMARCA4P51532 1647 aa29.68■■■□□ 2.34
YPEL3-203ENST00000562641 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
YPEL3-203ENST00000562641 DNAJC5BQ9UF47 199 aa29.54■■■□□ 2.32
YPEL3-203ENST00000562641 WIZO95785 1651 aa29.42■■■□□ 2.3
YPEL3-203ENST00000562641 CC2D2AQ9P2K1 1620 aa29.4■■■□□ 2.3
YPEL3-203ENST00000562641 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
YPEL3-203ENST00000562641 PEG3Q9GZU2 1588 aa29.35■■■□□ 2.29
YPEL3-203ENST00000562641 ATAD2BQ9ULI0 1458 aa29.31■■■□□ 2.28
YPEL3-203ENST00000562641 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.26
YPEL3-203ENST00000562641 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
YPEL3-203ENST00000562641 NCAPD3P42695 1498 aa29.15■■■□□ 2.26
YPEL3-203ENST00000562641 HMGXB3Q12766 1538 aa29.07■■■□□ 2.24
YPEL3-203ENST00000562641 CCDC88BA6NC98 1476 aa28.88■■■□□ 2.21
YPEL3-203ENST00000562641 CHIC1Q5VXU3 224 aa28.41■■■□□ 2.14
YPEL3-203ENST00000562641 CADPSQ9ULU8 1353 aa28.41■■■□□ 2.14
YPEL3-203ENST00000562641 CFTRP13569 1480 aa28.39■■■□□ 2.14
YPEL3-203ENST00000562641 LAMC3Q9Y6N6 1575 aa28.22■■■□□ 2.11
YPEL3-203ENST00000562641 TRIM41Q8WV44 630 aa28.21■■■□□ 2.11
YPEL3-203ENST00000562641 NESP48681 1621 aa28.19■■■□□ 2.1
YPEL3-203ENST00000562641 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
YPEL3-203ENST00000562641 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
YPEL3-203ENST00000562641 PDS5BQ9NTI5 1447 aa28.09■■■□□ 2.09
YPEL3-203ENST00000562641 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
YPEL3-203ENST00000562641 FANCD2Q9BXW9 1451 aa28.06■■■□□ 2.08
YPEL3-203ENST00000562641 CEP164Q9UPV0 1460 aa27.95■■■□□ 2.06
YPEL3-203ENST00000562641 ERCC6Q03468 1493 aa27.89■■■□□ 2.05
YPEL3-203ENST00000562641 KIF21AQ7Z4S6 1674 aa27.87■■■□□ 2.05
YPEL3-203ENST00000562641 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
YPEL3-203ENST00000562641 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
YPEL3-203ENST00000562641 CUX1P39880 1505 aa27.82■■■□□ 2.04
YPEL3-203ENST00000562641 BIVM-ERCC5R4GMW8 1640 aa27.79■■■□□ 2.04
YPEL3-203ENST00000562641 THOC2Q8NI27 1593 aaKnown RBP27.75■■■□□ 2.03
YPEL3-203ENST00000562641 DNMBPQ6XZF7 1577 aa27.73■■■□□ 2.03
YPEL3-203ENST00000562641 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
YPEL3-203ENST00000562641 MRC2Q9UBG0 1479 aa27.68■■■□□ 2.02
YPEL3-203ENST00000562641 URB2Q14146 1524 aaKnown RBP27.67■■■□□ 2.02
YPEL3-203ENST00000562641 FGD5Q6ZNL6 1462 aa27.61■■■□□ 2.01
YPEL3-203ENST00000562641 FAM9AQ8IZU1 332 aaPredicted RBP27.6■■■□□ 2.01
YPEL3-203ENST00000562641 WDR62O43379 1518 aa27.6■■■□□ 2.01
YPEL3-203ENST00000562641 EEA1Q15075 1411 aa27.58■■■□□ 2.01
YPEL3-203ENST00000562641 CUX2O14529 1486 aa27.57■■■□□ 2
YPEL3-203ENST00000562641 SOGA1O94964 1423 aa27.54■■■□□ 2
YPEL3-203ENST00000562641 POLA1P09884 1462 aaPredicted RBP27.52■■■□□ 2
YPEL3-203ENST00000562641 KIF27Q86VH2 1401 aa27.45■■□□□ 1.98
YPEL3-203ENST00000562641 CSRNP3Q8WYN3 585 aa27.43■■□□□ 1.98
YPEL3-203ENST00000562641 RAD54L2Q9Y4B4 1467 aa27.41■■□□□ 1.98
YPEL3-203ENST00000562641 RUSC2Q8N2Y8 1516 aa27.4■■□□□ 1.98
YPEL3-203ENST00000562641 ABCA10Q8WWZ4 1543 aa27.38■■□□□ 1.97
YPEL3-203ENST00000562641 IFT140Q96RY7 1462 aa27.32■■□□□ 1.96
YPEL3-203ENST00000562641 LOC105371045A0A1W2PR82 267 aa27.27■■□□□ 1.96
YPEL3-203ENST00000562641 TARBP1Q13395 1621 aaKnown RBP27.25■■□□□ 1.95
YPEL3-203ENST00000562641 TDRD9Q8NDG6 1382 aaKnown RBP27.22■■□□□ 1.95
YPEL3-203ENST00000562641 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
YPEL3-203ENST00000562641 EHMT2Q96KQ7 1210 aa27.18■■□□□ 1.94
YPEL3-203ENST00000562641 IGF1RP08069 1367 aa27.18■■□□□ 1.94
YPEL3-203ENST00000562641 GAPVD1Q14C86 1478 aa27.17■■□□□ 1.94
YPEL3-203ENST00000562641 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
YPEL3-203ENST00000562641 GOLGA3Q08378 1498 aa27.12■■□□□ 1.93
YPEL3-203ENST00000562641 KIF21BO75037 1637 aa27.12■■□□□ 1.93
YPEL3-203ENST00000562641 PRXQ9BXM0 1461 aa27.09■■□□□ 1.93
YPEL3-203ENST00000562641 AQRO60306 1485 aaKnown RBP eCLIP27.08■■□□□ 1.935e-15■■■■□ 22.3
YPEL3-203ENST00000562641 ERICH3Q5RHP9 1530 aa27.08■■□□□ 1.93
YPEL3-203ENST00000562641 CARMIL1Q5VZK9 1371 aa27.08■■□□□ 1.93
YPEL3-203ENST00000562641 UBTFP17480 764 aaKnown RBP27.08■■□□□ 1.93
YPEL3-203ENST00000562641 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
YPEL3-203ENST00000562641 GRIN2BQ13224 1484 aa27.03■■□□□ 1.92
YPEL3-203ENST00000562641 RAPGEF2Q9Y4G8 1499 aa27.01■■□□□ 1.91
YPEL3-203ENST00000562641 CUL7Q14999 1698 aa27■■□□□ 1.91
YPEL3-203ENST00000562641 TNIKQ9UKE5 1360 aa26.97■■□□□ 1.91
YPEL3-203ENST00000562641 EIF4G3O43432 1585 aaKnown RBP26.97■■□□□ 1.91
YPEL3-203ENST00000562641 PBRM1Q86U86 1689 aa26.94■■□□□ 1.9
YPEL3-203ENST00000562641 FHAD1B1AJZ9 1412 aa26.9■■□□□ 1.9
YPEL3-203ENST00000562641 MAGI1Q96QZ7 1491 aaPredicted RBP26.85■■□□□ 1.89
YPEL3-203ENST00000562641 SNAPC4Q5SXM2 1469 aa26.84■■□□□ 1.89
YPEL3-203ENST00000562641 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
YPEL3-203ENST00000562641 CEP162Q5TB80 1403 aa26.76■■□□□ 1.87
YPEL3-203ENST00000562641 CHMP7Q8WUX9 453 aaPredicted RBP26.76■■□□□ 1.87
YPEL3-203ENST00000562641 SYNJ2O15056 1496 aa26.73■■□□□ 1.87
YPEL3-203ENST00000562641 FBLN2P98095 1184 aa26.71■■□□□ 1.87
YPEL3-203ENST00000562641 CLIP1P30622 1438 aa26.67■■□□□ 1.86
YPEL3-203ENST00000562641 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms