RNA–Protein interactions for RNA: ENST00000562169.1

GSPT1-204, Transcript of G1 to S phase transition 1, humanhuman

TSL 3

Gene GSPT1, Length 466 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSPT1-204ENST00000562169 NISCHQ9Y2I1 1504 aa43.6■■■■■ 4.57
GSPT1-204ENST00000562169 ABCC9O60706 1549 aa40.7■■■■■ 4.11
GSPT1-204ENST00000562169 CCDC180Q9P1Z9 1646 aa39.57■■■■□ 3.92
GSPT1-204ENST00000562169 DNAJC5BQ9UF47 199 aa39.16■■■■□ 3.86
GSPT1-204ENST00000562169 RB1CC1Q8TDY2 1594 aa38.26■■■■□ 3.72
GSPT1-204ENST00000562169 PABPN1Q86U42 306 aaKnown RBP eCLIP37.74■■■■□ 3.63
GSPT1-204ENST00000562169 NACADO15069 1562 aa37.72■■■■□ 3.63
GSPT1-204ENST00000562169 DCAF8L2P0C7V8 631 aa37.39■■■■□ 3.58
GSPT1-204ENST00000562169 UNC13AQ9UPW8 1703 aa37.26■■■■□ 3.56
GSPT1-204ENST00000562169 BICRAQ9NZM4 1560 aa37.12■■■■□ 3.53
GSPT1-204ENST00000562169 MYO15BQ96JP2 1530 aa36.85■■■■□ 3.49
GSPT1-204ENST00000562169 DNAJC5Q9H3Z4 198 aa36.84■■■■□ 3.49
GSPT1-204ENST00000562169 CECR2Q9BXF3 1484 aa36.8■■■■□ 3.48
GSPT1-204ENST00000562169 CC2D2AQ9P2K1 1620 aa36.68■■■■□ 3.46
GSPT1-204ENST00000562169 SHROOM4Q9ULL8 1493 aa36.59■■■■□ 3.45
GSPT1-204ENST00000562169 EIF4G1Q04637 1599 aaKnown RBP36.34■■■■□ 3.41
GSPT1-204ENST00000562169 SCRIBQ14160 1630 aa35.99■■■■□ 3.35
GSPT1-204ENST00000562169 DCAF1Q9Y4B6 1507 aa35.95■■■■□ 3.35
GSPT1-204ENST00000562169 ZCCHC6Q5VYS8 1495 aaKnown RBP35.87■■■■□ 3.33
GSPT1-204ENST00000562169 CUX2O14529 1486 aa35.56■■■■□ 3.28
GSPT1-204ENST00000562169 ERCC6Q03468 1493 aa35.27■■■■□ 3.24
GSPT1-204ENST00000562169 NCAPD3P42695 1498 aa34.86■■■■□ 3.17
GSPT1-204ENST00000562169 TRIM41Q8WV44 630 aa34.77■■■■□ 3.16
GSPT1-204ENST00000562169 NESP48681 1621 aa34.61■■■■□ 3.13
GSPT1-204ENST00000562169 ATAD2BQ9ULI0 1458 aa34.58■■■■□ 3.13
GSPT1-204ENST00000562169 HMGXB3Q12766 1538 aa34.46■■■■□ 3.11
GSPT1-204ENST00000562169 THOC2Q8NI27 1593 aaKnown RBP34.46■■■■□ 3.11
GSPT1-204ENST00000562169 SMARCA2P51531 1590 aa34.43■■■■□ 3.1
GSPT1-204ENST00000562169 LAMC3Q9Y6N6 1575 aa34.23■■■■□ 3.07
GSPT1-204ENST00000562169 SMARCA4P51532 1647 aa34.22■■■■□ 3.07
GSPT1-204ENST00000562169 BAZ1BQ9UIG0 1483 aaKnown RBP34.2■■■■□ 3.06
GSPT1-204ENST00000562169 PDS5BQ9NTI5 1447 aa34.13■■■■□ 3.05
GSPT1-204ENST00000562169 KIF21AQ7Z4S6 1674 aa34.09■■■■□ 3.05
GSPT1-204ENST00000562169 BAZ1AQ9NRL2 1556 aaPredicted RBP33.94■■■■□ 3.02
GSPT1-204ENST00000562169 PEG3Q9GZU2 1588 aa33.9■■■■□ 3.02
GSPT1-204ENST00000562169 MRC2Q9UBG0 1479 aa33.85■■■■□ 3.01
GSPT1-204ENST00000562169 OSCARQ8IYS5 282 aa33.81■■■■□ 3
GSPT1-204ENST00000562169 WDR62O43379 1518 aa33.78■■■■□ 3
GSPT1-204ENST00000562169 CADPSQ9ULU8 1353 aa33.76■■■■□ 3
GSPT1-204ENST00000562169 MROH2BQ7Z745 1585 aa33.55■■■□□ 2.96
GSPT1-204ENST00000562169 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
GSPT1-204ENST00000562169 RIMBP3CA6NJZ7 1639 aa33.38■■■□□ 2.93
GSPT1-204ENST00000562169 RIMBP3BA6NNM3 1639 aa33.38■■■□□ 2.93
GSPT1-204ENST00000562169 RIMBP3Q9UFD9 1639 aa33.38■■■□□ 2.93
GSPT1-204ENST00000562169 FANCD2Q9BXW9 1451 aa33.37■■■□□ 2.93
GSPT1-204ENST00000562169 ARHGEF11O15085 1522 aa33.18■■■□□ 2.9
GSPT1-204ENST00000562169 URB2Q14146 1524 aaKnown RBP33.12■■■□□ 2.89
GSPT1-204ENST00000562169 CFTRP13569 1480 aa33.12■■■□□ 2.89
GSPT1-204ENST00000562169 TRHP20396 242 aaPredicted RBP33.11■■■□□ 2.89
GSPT1-204ENST00000562169 CYB5RLQ6IPT4 315 aa33.09■■■□□ 2.89
GSPT1-204ENST00000562169 WIZO95785 1651 aa33.08■■■□□ 2.89
GSPT1-204ENST00000562169 AEBP2Q6ZN18 517 aaPredicted RBP33■■■□□ 2.87
GSPT1-204ENST00000562169 ZNF608Q9ULD9 1512 aaPredicted RBP32.89■■■□□ 2.86
GSPT1-204ENST00000562169 IFT140Q96RY7 1462 aa32.89■■■□□ 2.86
GSPT1-204ENST00000562169 ARAP1Q96P48 1450 aa32.78■■■□□ 2.84
GSPT1-204ENST00000562169 RSF1Q96T23 1441 aaPredicted RBP32.65■■■□□ 2.82
GSPT1-204ENST00000562169 EIF4G3O43432 1585 aaKnown RBP32.64■■■□□ 2.82
GSPT1-204ENST00000562169 TOP2AP11388 1531 aaKnown RBP32.62■■■□□ 2.81
GSPT1-204ENST00000562169 PRDM2Q13029 1718 aa32.6■■■□□ 2.81
GSPT1-204ENST00000562169 TOPBP1Q92547 1522 aa32.59■■■□□ 2.81
GSPT1-204ENST00000562169 CHD1O14646 1710 aa32.58■■■□□ 2.81
GSPT1-204ENST00000562169 FBLN2P98095 1184 aa32.58■■■□□ 2.81
GSPT1-204ENST00000562169 ABCC8Q09428 1581 aa32.5■■■□□ 2.79
GSPT1-204ENST00000562169 AQRO60306 1485 aaKnown RBP eCLIP32.49■■■□□ 2.794e-9■□□□□ 10
GSPT1-204ENST00000562169 DNMBPQ6XZF7 1577 aa32.36■■■□□ 2.77
GSPT1-204ENST00000562169 TARBP1Q13395 1621 aaKnown RBP32.34■■■□□ 2.77
GSPT1-204ENST00000562169 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
GSPT1-204ENST00000562169 CLASP1Q7Z460 1538 aa32.21■■■□□ 2.75
GSPT1-204ENST00000562169 POLA1P09884 1462 aaPredicted RBP32.18■■■□□ 2.74
GSPT1-204ENST00000562169 CHMP7Q8WUX9 453 aaPredicted RBP32.16■■■□□ 2.74
GSPT1-204ENST00000562169 SYNJ1O43426 1573 aa32.14■■■□□ 2.74
GSPT1-204ENST00000562169 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
GSPT1-204ENST00000562169 SNAPC4Q5SXM2 1469 aa32.11■■■□□ 2.73
GSPT1-204ENST00000562169 RAD54L2Q9Y4B4 1467 aa32.09■■■□□ 2.73
GSPT1-204ENST00000562169 SOGA1O94964 1423 aa32.07■■■□□ 2.72
GSPT1-204ENST00000562169 GAPVD1Q14C86 1478 aa32.02■■■□□ 2.72
GSPT1-204ENST00000562169 MAGI1Q96QZ7 1491 aaPredicted RBP32.01■■■□□ 2.71
GSPT1-204ENST00000562169 WDR97A6NE52 1622 aa31.98■■■□□ 2.71
GSPT1-204ENST00000562169 SYNJ2O15056 1496 aa31.91■■■□□ 2.7
GSPT1-204ENST00000562169 GRIN2BQ13224 1484 aa31.91■■■□□ 2.7
GSPT1-204ENST00000562169 FGD5Q6ZNL6 1462 aa31.82■■■□□ 2.68
GSPT1-204ENST00000562169 ILDR1Q86SU0 546 aaPredicted RBP31.64■■■□□ 2.66
GSPT1-204ENST00000562169 ERCC6L2Q5T890 1561 aa31.61■■■□□ 2.65
GSPT1-204ENST00000562169 PBRM1Q86U86 1689 aa31.6■■■□□ 2.65
GSPT1-204ENST00000562169 CUX1P39880 1505 aa31.59■■■□□ 2.65
GSPT1-204ENST00000562169 KIF13AQ9H1H9 1805 aa31.52■■■□□ 2.64
GSPT1-204ENST00000562169 CEP170Q5SW79 1584 aa31.49■■■□□ 2.63
GSPT1-204ENST00000562169 GRIN2AQ12879 1464 aa31.46■■■□□ 2.63
GSPT1-204ENST00000562169 KDM4FA0A1W2PPD8 638 aa31.42■■■□□ 2.62
GSPT1-204ENST00000562169 ABCA10Q8WWZ4 1543 aa31.41■■■□□ 2.62
GSPT1-204ENST00000562169 ABCA5Q8WWZ7 1642 aa31.41■■■□□ 2.62
GSPT1-204ENST00000562169 NUP160Q12769 1436 aa31.4■■■□□ 2.62
GSPT1-204ENST00000562169 FAM69CQ0P6D2 419 aa31.38■■■□□ 2.61
GSPT1-204ENST00000562169 SHROOM2Q13796 1616 aa31.35■■■□□ 2.61
GSPT1-204ENST00000562169 ABCC10Q5T3U5 1492 aa31.31■■■□□ 2.6
GSPT1-204ENST00000562169 NPM1P06748 294 aaKnown RBP eCLIP31.27■■■□□ 2.6
GSPT1-204ENST00000562169 ADAMTS12P58397 1594 aa31.26■■■□□ 2.6
GSPT1-204ENST00000562169 PRG4Q92954 1404 aaPredicted RBP31.23■■■□□ 2.59
GSPT1-204ENST00000562169 KDM6BO15054 1643 aa31.2■■■□□ 2.59
GSPT1-204ENST00000562169 FHAD1B1AJZ9 1412 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms