RNA–Protein interactions for RNA: ENST00000562074.2

NAE1-206, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-206ENST00000562074 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
NAE1-206ENST00000562074 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
NAE1-206ENST00000562074 PHF23Q9BUL5 403 aaPredicted RBP14.74□□□□□ -0.05
NAE1-206ENST00000562074 SENP3Q9H4L4 574 aaPredicted RBP14.42□□□□□ -0.1
NAE1-206ENST00000562074 PLPPR3Q6T4P5 718 aa13.6□□□□□ -0.23
NAE1-206ENST00000562074 FOXD1Q16676 465 aa13.4□□□□□ -0.26
NAE1-206ENST00000562074 ADRA2BP18089 450 aa12.98□□□□□ -0.33
NAE1-206ENST00000562074 PPP6R1Q9UPN7 881 aa12.98□□□□□ -0.33
NAE1-206ENST00000562074 POTEDQ86YR6 584 aa12.83□□□□□ -0.36
NAE1-206ENST00000562074 PIAS4Q8N2W9 510 aaPredicted RBP12.66□□□□□ -0.38
NAE1-206ENST00000562074 MSH5O43196 834 aa12.39□□□□□ -0.43
NAE1-206ENST00000562074 PPP4R3CPQ6ZMV5 832 aa12.03□□□□□ -0.48
NAE1-206ENST00000562074 KCNA4P22459 653 aa11.88□□□□□ -0.51
NAE1-206ENST00000562074 SCAF1Q9H7N4 1312 aaKnown RBP11.81□□□□□ -0.52
NAE1-206ENST00000562074 MAPK8IP2Q13387 824 aaPredicted RBP11.76□□□□□ -0.53
NAE1-206ENST00000562074 NCBP3Q53F19 620 aaKnown RBP11.71□□□□□ -0.53
NAE1-206ENST00000562074 CNKSR2Q8WXI2 1034 aa11.64□□□□□ -0.55
NAE1-206ENST00000562074 NPM3O75607 178 aaKnown RBP11.57□□□□□ -0.56
NAE1-206ENST00000562074 DMRT2Q9Y5R5 561 aa11.53□□□□□ -0.56
NAE1-206ENST00000562074 RNF216Q9NWF9 866 aaPredicted RBP11.39□□□□□ -0.59
NAE1-206ENST00000562074 HOXD11P31277 338 aaPredicted RBP11.32□□□□□ -0.6
NAE1-206ENST00000562074 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
NAE1-206ENST00000562074 EHMT2Q96KQ7 1210 aa11.14□□□□□ -0.63
NAE1-206ENST00000562074 DNAJC5BQ9UF47 199 aa11.14□□□□□ -0.63
NAE1-206ENST00000562074 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
NAE1-206ENST00000562074 CSRNP3Q8WYN3 585 aa10.94□□□□□ -0.66
NAE1-206ENST00000562074 ZBTB22O15209 634 aa10.93□□□□□ -0.66
NAE1-206ENST00000562074 SLC4A2P04920 1241 aa10.91□□□□□ -0.66
NAE1-206ENST00000562074 FOXD4L1Q9NU39 408 aa10.88□□□□□ -0.67
NAE1-206ENST00000562074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.82□□□□□ -0.68
NAE1-206ENST00000562074 CACNB1Q02641 598 aaPredicted RBP10.81□□□□□ -0.68
NAE1-206ENST00000562074 MYCNP04198 464 aaPredicted RBP10.67□□□□□ -0.7
NAE1-206ENST00000562074 U3KPZ7 1027 aaPredicted RBP10.66□□□□□ -0.7
NAE1-206ENST00000562074 RNF39Q9H2S5 420 aa10.58□□□□□ -0.72
NAE1-206ENST00000562074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.49□□□□□ -0.73
NAE1-206ENST00000562074 HNRNPUL2Q1KMD3 747 aaKnown RBP10.49□□□□□ -0.73
NAE1-206ENST00000562074 SAMD1Q6SPF0 538 aaPredicted RBP10.48□□□□□ -0.73
NAE1-206ENST00000562074 ATXN8OSP0DMR3 200 aa10.44□□□□□ -0.74
NAE1-206ENST00000562074 ATF5Q9Y2D1 282 aaPredicted RBP10.42□□□□□ -0.74
NAE1-206ENST00000562074 C1QBPQ07021 282 aaKnown RBP10.41□□□□□ -0.74
NAE1-206ENST00000562074 APLP2Q06481 763 aa10.36□□□□□ -0.75
NAE1-206ENST00000562074 SPINK5Q9NQ38 1064 aaPredicted RBP10.35□□□□□ -0.75
NAE1-206ENST00000562074 CAPN15O75808 1086 aa10.29□□□□□ -0.76
NAE1-206ENST00000562074 TRHP20396 242 aaPredicted RBP10.28□□□□□ -0.76
NAE1-206ENST00000562074 ZNF219Q9P2Y4 722 aaPredicted RBP10.23□□□□□ -0.77
NAE1-206ENST00000562074 ABCB7O75027 752 aa10.13□□□□□ -0.79
NAE1-206ENST00000562074 POLA2Q14181 598 aa10.11□□□□□ -0.79
NAE1-206ENST00000562074 DSG3P32926 999 aa10.08□□□□□ -0.8
NAE1-206ENST00000562074 MKRN4PQ13434 485 aaPredicted RBP9.96□□□□□ -0.82
NAE1-206ENST00000562074 POTEHQ6S545 545 aa9.95□□□□□ -0.82
NAE1-206ENST00000562074 FBLN2P98095 1184 aa9.94□□□□□ -0.82
NAE1-206ENST00000562074 ZBTB12Q9Y330 459 aaPredicted RBP9.9□□□□□ -0.82
NAE1-206ENST00000562074 FKBP8Q14318 412 aa9.89□□□□□ -0.83
NAE1-206ENST00000562074 OSCARQ8IYS5 282 aa9.79□□□□□ -0.84
NAE1-206ENST00000562074 SPDYE4A6NLX3 237 aa9.77□□□□□ -0.85
NAE1-206ENST00000562074 SPDYE2BA6NHP3 402 aa9.66□□□□□ -0.86
NAE1-206ENST00000562074 SPDYE6P0CI01 402 aa9.66□□□□□ -0.86
NAE1-206ENST00000562074 SPDYE2Q495Y8 402 aa9.66□□□□□ -0.86
NAE1-206ENST00000562074 ZNF692Q9BU19 519 aaPredicted RBP9.66□□□□□ -0.86
NAE1-206ENST00000562074 SSUH2Q9Y2M2 353 aa9.61□□□□□ -0.87
NAE1-206ENST00000562074 PROM2Q8N271 834 aa9.6□□□□□ -0.87
NAE1-206ENST00000562074 RBM42Q9BTD8 480 aaKnown RBP9.57□□□□□ -0.88
NAE1-206ENST00000562074 PABPN1Q86U42 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
NAE1-206ENST00000562074 AKT1S1Q96B36 256 aa9.49□□□□□ -0.89
NAE1-206ENST00000562074 FBXO3Q9UK99 471 aa9.46□□□□□ -0.9
NAE1-206ENST00000562074 REM2Q8IYK8 340 aaPredicted RBP9.42□□□□□ -0.9
NAE1-206ENST00000562074 SPDYE1Q8NFV5 336 aaPredicted RBP9.37□□□□□ -0.91
NAE1-206ENST00000562074 VASPP50552 380 aaPredicted RBP9.36□□□□□ -0.91
NAE1-206ENST00000562074 STAG3Q9UJ98 1225 aa9.36□□□□□ -0.91
NAE1-206ENST00000562074 CLEC11AQ9Y240 323 aa9.36□□□□□ -0.91
NAE1-206ENST00000562074 PITPNM1O00562 1244 aa9.32□□□□□ -0.92
NAE1-206ENST00000562074 PRR29P0C7W0 189 aa9.26□□□□□ -0.93
NAE1-206ENST00000562074 PLCD3Q8N3E9 789 aa9.26□□□□□ -0.93
NAE1-206ENST00000562074 MIER1Q8N108 512 aa9.25□□□□□ -0.93
NAE1-206ENST00000562074 CHRDL2Q6WN34 429 aa9.24□□□□□ -0.93
NAE1-206ENST00000562074 IFNLR1Q8IU57 520 aaPredicted RBP9.24□□□□□ -0.93
NAE1-206ENST00000562074 KLHL34Q8N239 644 aa9.19□□□□□ -0.94
NAE1-206ENST00000562074 CREBZFQ9NS37 354 aa9.18□□□□□ -0.94
NAE1-206ENST00000562074 PLEKHG5O94827 1062 aa9.17□□□□□ -0.94
NAE1-206ENST00000562074 RTN4Q9NQC3 1192 aaKnown RBP9.17□□□□□ -0.94
NAE1-206ENST00000562074 AMER1Q5JTC6 1135 aaPredicted RBP9.14□□□□□ -0.95
NAE1-206ENST00000562074 CHADLQ6NUI6 762 aa9.13□□□□□ -0.95
NAE1-206ENST00000562074 SP7Q8TDD2 431 aaPredicted RBP9.13□□□□□ -0.95
NAE1-206ENST00000562074 SPOCK2Q92563 424 aa9.11□□□□□ -0.95
NAE1-206ENST00000562074 FXR2P51116 673 aaKnown RBP eCLIP9.1□□□□□ -0.95
NAE1-206ENST00000562074 ZBTB47Q9UFB7 747 aaPredicted RBP9.1□□□□□ -0.95
NAE1-206ENST00000562074 PRKAR2AP13861 404 aaKnown RBP9.08□□□□□ -0.96
NAE1-206ENST00000562074 MNX1P50219 401 aaPredicted RBP9.08□□□□□ -0.96
NAE1-206ENST00000562074 PIP4P2Q8N4L2 257 aa9.08□□□□□ -0.96
NAE1-206ENST00000562074 FARP1Q9Y4F1 1045 aaPredicted RBP9.02□□□□□ -0.97
NAE1-206ENST00000562074 NUBP1P53384 320 aa9.01□□□□□ -0.97
NAE1-206ENST00000562074 NPM1P06748 294 aaKnown RBP eCLIP9□□□□□ -0.97
NAE1-206ENST00000562074 PKD2Q13563 968 aa8.98□□□□□ -0.97
NAE1-206ENST00000562074 CIZ1Q9ULV3 898 aaPredicted RBP8.98□□□□□ -0.97
NAE1-206ENST00000562074 RASEFQ8IZ41 740 aa8.97□□□□□ -0.97
NAE1-206ENST00000562074 DCAF8Q5TAQ9 597 aa8.94□□□□□ -0.98
NAE1-206ENST00000562074 FAM212AQ96EL1 285 aa8.92□□□□□ -0.98
NAE1-206ENST00000562074 ECM2O94769 699 aaPredicted RBP8.91□□□□□ -0.98
NAE1-206ENST00000562074 GSE1Q14687 1217 aa8.91□□□□□ -0.98
NAE1-206ENST00000562074 TSPYL2Q9H2G4 693 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms