RNA–Protein interactions for RNA: ENST00000561778.2

AC008555.1-201, humanhuman

BASIC

Gene AC008555.1, Length 2,757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.1-201ENST00000561778 NISCHQ9Y2I1 1504 aa15.1■□□□□ 0.01
AC008555.1-201ENST00000561778 SHROOM4Q9ULL8 1493 aa13.51□□□□□ -0.25
AC008555.1-201ENST00000561778 SUPT5HO00267 1087 aaKnown RBP13.35□□□□□ -0.27
AC008555.1-201ENST00000561778 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.32
AC008555.1-201ENST00000561778 HRCP23327 699 aa13□□□□□ -0.33
AC008555.1-201ENST00000561778 PCGF6Q9BYE7 350 aa12.97□□□□□ -0.33
AC008555.1-201ENST00000561778 CHIC1Q5VXU3 224 aa12.95□□□□□ -0.34
AC008555.1-201ENST00000561778 PPARGC1BQ86YN6 1023 aaKnown RBP12.95□□□□□ -0.34
AC008555.1-201ENST00000561778 DCAF8L2P0C7V8 631 aa12.9□□□□□ -0.34
AC008555.1-201ENST00000561778 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
AC008555.1-201ENST00000561778 LOC105371045A0A1W2PR82 267 aa12.75□□□□□ -0.37
AC008555.1-201ENST00000561778 DCAF1Q9Y4B6 1507 aa12.5□□□□□ -0.41
AC008555.1-201ENST00000561778 CCDC180Q9P1Z9 1646 aa12.49□□□□□ -0.41
AC008555.1-201ENST00000561778 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.41
AC008555.1-201ENST00000561778 TRIM26Q12899 539 aaPredicted RBP12.46□□□□□ -0.42
AC008555.1-201ENST00000561778 FAM9AQ8IZU1 332 aaPredicted RBP12.4□□□□□ -0.42
AC008555.1-201ENST00000561778 SCAF1Q9H7N4 1312 aaKnown RBP12.27□□□□□ -0.45
AC008555.1-201ENST00000561778 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
AC008555.1-201ENST00000561778 ZEB1P37275 1124 aaPredicted RBP12.18□□□□□ -0.46
AC008555.1-201ENST00000561778 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.46
AC008555.1-201ENST00000561778 ABCC9O60706 1549 aa12.12□□□□□ -0.47
AC008555.1-201ENST00000561778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
AC008555.1-201ENST00000561778 RB1CC1Q8TDY2 1594 aa12.1□□□□□ -0.47
AC008555.1-201ENST00000561778 SCRIBQ14160 1630 aa12.1□□□□□ -0.47
AC008555.1-201ENST00000561778 TTBK1Q5TCY1 1321 aaPredicted RBP12.1□□□□□ -0.47
AC008555.1-201ENST00000561778 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
AC008555.1-201ENST00000561778 NEUROD1Q13562 356 aa12.02□□□□□ -0.49
AC008555.1-201ENST00000561778 CCER1Q8TC90 406 aaPredicted RBP12.01□□□□□ -0.49
AC008555.1-201ENST00000561778 ACIN1Q9UKV3 1341 aaKnown RBP11.96□□□□□ -0.5
AC008555.1-201ENST00000561778 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
AC008555.1-201ENST00000561778 GTF3C3Q9Y5Q9 886 aa11.92□□□□□ -0.5
AC008555.1-201ENST00000561778 DIEXFQ68CQ4 756 aaKnown RBP11.9□□□□□ -0.5
AC008555.1-201ENST00000561778 MROH2BQ7Z745 1585 aa11.87□□□□□ -0.51
AC008555.1-201ENST00000561778 YTHDC1Q96MU7 727 aaKnown RBP11.83□□□□□ -0.52
AC008555.1-201ENST00000561778 WIZO95785 1651 aa11.81□□□□□ -0.52
AC008555.1-201ENST00000561778 CENPBP07199 599 aaPredicted RBP11.78□□□□□ -0.52
AC008555.1-201ENST00000561778 AEBP2Q6ZN18 517 aaPredicted RBP11.74□□□□□ -0.53
AC008555.1-201ENST00000561778 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
AC008555.1-201ENST00000561778 CCDC88BA6NC98 1476 aa11.72□□□□□ -0.53
AC008555.1-201ENST00000561778 CEP162Q5TB80 1403 aa11.7□□□□□ -0.54
AC008555.1-201ENST00000561778 UBTFP17480 764 aaKnown RBP11.7□□□□□ -0.54
AC008555.1-201ENST00000561778 SOGA1O94964 1423 aa11.7□□□□□ -0.54
AC008555.1-201ENST00000561778 HNRNPUL2Q1KMD3 747 aaKnown RBP11.68□□□□□ -0.54
AC008555.1-201ENST00000561778 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
AC008555.1-201ENST00000561778 MIER1Q8N108 512 aa11.67□□□□□ -0.54
AC008555.1-201ENST00000561778 RUSC2Q8N2Y8 1516 aa11.65□□□□□ -0.54
AC008555.1-201ENST00000561778 RANGAP1P46060 587 aaPredicted RBP11.63□□□□□ -0.55
AC008555.1-201ENST00000561778 EIF4G1Q04637 1599 aaKnown RBP11.63□□□□□ -0.55
AC008555.1-201ENST00000561778 BAZ1AQ9NRL2 1556 aaPredicted RBP11.61□□□□□ -0.55
AC008555.1-201ENST00000561778 WRNQ14191 1432 aaPredicted RBP eCLIP11.61□□□□□ -0.55
AC008555.1-201ENST00000561778 CSRNP3Q8WYN3 585 aa11.59□□□□□ -0.55
AC008555.1-201ENST00000561778 TNIKQ9UKE5 1360 aa11.57□□□□□ -0.56
AC008555.1-201ENST00000561778 NACADO15069 1562 aa11.56□□□□□ -0.56
AC008555.1-201ENST00000561778 DNAJC5BQ9UF47 199 aa11.54□□□□□ -0.56
AC008555.1-201ENST00000561778 SMARCA2P51531 1590 aa11.49□□□□□ -0.57
AC008555.1-201ENST00000561778 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
AC008555.1-201ENST00000561778 GOLGA3Q08378 1498 aa11.45□□□□□ -0.58
AC008555.1-201ENST00000561778 PABPN1Q86U42 306 aaKnown RBP eCLIP11.45□□□□□ -0.58
AC008555.1-201ENST00000561778 SMARCA4P51532 1647 aa11.43□□□□□ -0.58
AC008555.1-201ENST00000561778 MYT1Q01538 1121 aa11.41□□□□□ -0.58
AC008555.1-201ENST00000561778 CLIP1P30622 1438 aa11.41□□□□□ -0.58
AC008555.1-201ENST00000561778 APLP2Q06481 763 aa11.41□□□□□ -0.58
AC008555.1-201ENST00000561778 EEA1Q15075 1411 aa11.39□□□□□ -0.59
AC008555.1-201ENST00000561778 SUPT16HQ9Y5B9 1047 aaKnown RBP11.36□□□□□ -0.59
AC008555.1-201ENST00000561778 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
AC008555.1-201ENST00000561778 VPS8Q8N3P4 1428 aa11.34□□□□□ -0.59
AC008555.1-201ENST00000561778 SYNJ1O43426 1573 aa11.34□□□□□ -0.59
AC008555.1-201ENST00000561778 CEP164Q9UPV0 1460 aa11.33□□□□□ -0.59
AC008555.1-201ENST00000561778 KCNH8Q96L42 1107 aa11.33□□□□□ -0.59
AC008555.1-201ENST00000561778 ITGAEP38570 1179 aa11.33□□□□□ -0.6
AC008555.1-201ENST00000561778 KANK4Q5T7N3 995 aaPredicted RBP11.32□□□□□ -0.6
AC008555.1-201ENST00000561778 DHX57Q6P158 1386 aaKnown RBP11.3□□□□□ -0.6
AC008555.1-201ENST00000561778 BCANQ96GW7 911 aa11.29□□□□□ -0.6
AC008555.1-201ENST00000561778 KIF21BO75037 1637 aa11.27□□□□□ -0.6
AC008555.1-201ENST00000561778 TSHZ2Q9NRE2 1034 aa11.26□□□□□ -0.61
AC008555.1-201ENST00000561778 UNC13AQ9UPW8 1703 aa11.24□□□□□ -0.61
AC008555.1-201ENST00000561778 HIRIP3Q9BW71 556 aaPredicted RBP11.18□□□□□ -0.62
AC008555.1-201ENST00000561778 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
AC008555.1-201ENST00000561778 BAZ1BQ9UIG0 1483 aaKnown RBP11.17□□□□□ -0.62
AC008555.1-201ENST00000561778 DDX10Q13206 875 aaKnown RBP11.15□□□□□ -0.62
AC008555.1-201ENST00000561778 BICRAQ9NZM4 1560 aa11.14□□□□□ -0.63
AC008555.1-201ENST00000561778 FKBP8Q14318 412 aa11.14□□□□□ -0.63
AC008555.1-201ENST00000561778 CLSPNQ9HAW4 1339 aa11.14□□□□□ -0.63
AC008555.1-201ENST00000561778 SIN3AQ96ST3 1273 aa11.13□□□□□ -0.63
AC008555.1-201ENST00000561778 ATAD2BQ9ULI0 1458 aa11.12□□□□□ -0.63
AC008555.1-201ENST00000561778 ANP32EQ9BTT0 268 aa11.12□□□□□ -0.63
AC008555.1-201ENST00000561778 TRIM52Q96A61 297 aa11.11□□□□□ -0.63
AC008555.1-201ENST00000561778 CCNB3Q8WWL7 1395 aa11.1□□□□□ -0.63
AC008555.1-201ENST00000561778 RAB3GAP2Q9H2M9 1393 aa11.09□□□□□ -0.63
AC008555.1-201ENST00000561778 RRBP1Q9P2E9 1410 aaKnown RBP11.08□□□□□ -0.64
AC008555.1-201ENST00000561778 PRXQ9BXM0 1461 aa11.08□□□□□ -0.64
AC008555.1-201ENST00000561778 FAM50AQ14320 339 aaKnown RBP11.06□□□□□ -0.64
AC008555.1-201ENST00000561778 PEG3Q9GZU2 1588 aa11.06□□□□□ -0.64
AC008555.1-201ENST00000561778 ATP1B4Q9UN42 357 aaPredicted RBP11.06□□□□□ -0.64
AC008555.1-201ENST00000561778 TOP2BQ02880 1626 aa11.06□□□□□ -0.64
AC008555.1-201ENST00000561778 P3H3Q8IVL6 736 aa11.05□□□□□ -0.64
AC008555.1-201ENST00000561778 MAPKBP1O60336 1514 aa11.04□□□□□ -0.64
AC008555.1-201ENST00000561778 ARHGAP35Q9NRY4 1499 aa11.03□□□□□ -0.64
AC008555.1-201ENST00000561778 WDR97A6NE52 1622 aa11.02□□□□□ -0.64
AC008555.1-201ENST00000561778 BCL11AQ9H165 835 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms