RNA–Protein interactions for RNA: ENST00000561578.5

TMEM87A-204, Transcript of transmembrane protein 87A, humanhuman

TSL 4

Gene TMEM87A, Length 528 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-204ENST00000561578 AEBP2Q6ZN18 517 aaPredicted RBP19.09■□□□□ 0.65
TMEM87A-204ENST00000561578 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
TMEM87A-204ENST00000561578 SENP3Q9H4L4 574 aaPredicted RBP16.22■□□□□ 0.19
TMEM87A-204ENST00000561578 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
TMEM87A-204ENST00000561578 FOXD1Q16676 465 aa15.3■□□□□ 0.04
TMEM87A-204ENST00000561578 POTEDQ86YR6 584 aa15.21■□□□□ 0.03
TMEM87A-204ENST00000561578 MSH5O43196 834 aa14.42□□□□□ -0.1
TMEM87A-204ENST00000561578 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
TMEM87A-204ENST00000561578 PPP6R1Q9UPN7 881 aa13.89□□□□□ -0.19
TMEM87A-204ENST00000561578 ADRA2BP18089 450 aa13.81□□□□□ -0.2
TMEM87A-204ENST00000561578 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
TMEM87A-204ENST00000561578 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
TMEM87A-204ENST00000561578 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
TMEM87A-204ENST00000561578 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
TMEM87A-204ENST00000561578 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
TMEM87A-204ENST00000561578 DCAF8L1A6NGE4 600 aa12.38□□□□□ -0.43
TMEM87A-204ENST00000561578 RNF39Q9H2S5 420 aa12.3□□□□□ -0.44
TMEM87A-204ENST00000561578 HOXD11P31277 338 aaPredicted RBP12.08□□□□□ -0.48
TMEM87A-204ENST00000561578 C1QBPQ07021 282 aaKnown RBP12.02□□□□□ -0.49
TMEM87A-204ENST00000561578 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
TMEM87A-204ENST00000561578 RNF216Q9NWF9 866 aaPredicted RBP11.82□□□□□ -0.52
TMEM87A-204ENST00000561578 CNKSR2Q8WXI2 1034 aa11.78□□□□□ -0.52
TMEM87A-204ENST00000561578 POTEHQ6S545 545 aa11.77□□□□□ -0.53
TMEM87A-204ENST00000561578 DNAJC5BQ9UF47 199 aa11.64□□□□□ -0.55
TMEM87A-204ENST00000561578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.53□□□□□ -0.56
TMEM87A-204ENST00000561578 DSG3P32926 999 aa11.35□□□□□ -0.59
TMEM87A-204ENST00000561578 SPINK5Q9NQ38 1064 aaPredicted RBP11.33□□□□□ -0.6
TMEM87A-204ENST00000561578 CAPN15O75808 1086 aa11.28□□□□□ -0.6
TMEM87A-204ENST00000561578 U3KPZ7 1027 aaPredicted RBP11.28□□□□□ -0.6
TMEM87A-204ENST00000561578 NCBP3Q53F19 620 aaKnown RBP11.17□□□□□ -0.62
TMEM87A-204ENST00000561578 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.62
TMEM87A-204ENST00000561578 ABCB7O75027 752 aa11.05□□□□□ -0.64
TMEM87A-204ENST00000561578 TRHP20396 242 aaPredicted RBP10.99□□□□□ -0.65
TMEM87A-204ENST00000561578 SLC4A2P04920 1241 aa10.82□□□□□ -0.68
TMEM87A-204ENST00000561578 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
TMEM87A-204ENST00000561578 ZNF219Q9P2Y4 722 aaPredicted RBP10.82□□□□□ -0.68
TMEM87A-204ENST00000561578 SP7Q8TDD2 431 aaPredicted RBP10.75□□□□□ -0.69
TMEM87A-204ENST00000561578 RBM42Q9BTD8 480 aaKnown RBP10.74□□□□□ -0.69
TMEM87A-204ENST00000561578 APLP2Q06481 763 aa10.7□□□□□ -0.7
TMEM87A-204ENST00000561578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.57□□□□□ -0.72
TMEM87A-204ENST00000561578 HNRNPUL2Q1KMD3 747 aaKnown RBP10.57□□□□□ -0.72
TMEM87A-204ENST00000561578 POLA2Q14181 598 aa10.53□□□□□ -0.72
TMEM87A-204ENST00000561578 SAMD1Q6SPF0 538 aaPredicted RBP10.53□□□□□ -0.72
TMEM87A-204ENST00000561578 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
TMEM87A-204ENST00000561578 KCNA4P22459 653 aa10.45□□□□□ -0.74
TMEM87A-204ENST00000561578 HAX1O00165 279 aa10.43□□□□□ -0.74
TMEM87A-204ENST00000561578 AKT1S1Q96B36 256 aa10.39□□□□□ -0.75
TMEM87A-204ENST00000561578 REM2Q8IYK8 340 aaPredicted RBP10.36□□□□□ -0.75
TMEM87A-204ENST00000561578 EVX2Q03828 476 aa10.35□□□□□ -0.75
TMEM87A-204ENST00000561578 PITPNM1O00562 1244 aa10.3□□□□□ -0.76
TMEM87A-204ENST00000561578 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.76
TMEM87A-204ENST00000561578 MYCNP04198 464 aaPredicted RBP10.26□□□□□ -0.77
TMEM87A-204ENST00000561578 OSCARQ8IYS5 282 aa10.26□□□□□ -0.77
TMEM87A-204ENST00000561578 ATF5Q9Y2D1 282 aaPredicted RBP10.21□□□□□ -0.77
TMEM87A-204ENST00000561578 ZBTB12Q9Y330 459 aaPredicted RBP10.13□□□□□ -0.79
TMEM87A-204ENST00000561578 LHX8Q68G74 356 aa10.08□□□□□ -0.8
TMEM87A-204ENST00000561578 PRKAR2AP13861 404 aaKnown RBP10.01□□□□□ -0.81
TMEM87A-204ENST00000561578 PLSCR2Q9NRY7 297 aa10□□□□□ -0.81
TMEM87A-204ENST00000561578 GABBR2O75899 941 aa9.99□□□□□ -0.81
TMEM87A-204ENST00000561578 C19orf67A6NJJ6 358 aa9.97□□□□□ -0.81
TMEM87A-204ENST00000561578 CLEC11AQ9Y240 323 aa9.91□□□□□ -0.82
TMEM87A-204ENST00000561578 POTEIP0CG38 1075 aa9.84□□□□□ -0.83
TMEM87A-204ENST00000561578 CHADLQ6NUI6 762 aa9.84□□□□□ -0.83
TMEM87A-204ENST00000561578 FOXD4L1Q9NU39 408 aa9.84□□□□□ -0.83
TMEM87A-204ENST00000561578 SPDYE2BA6NHP3 402 aa9.82□□□□□ -0.84
TMEM87A-204ENST00000561578 SPDYE6P0CI01 402 aa9.82□□□□□ -0.84
TMEM87A-204ENST00000561578 SPDYE2Q495Y8 402 aa9.82□□□□□ -0.84
TMEM87A-204ENST00000561578 SPDYE1Q8NFV5 336 aaPredicted RBP9.8□□□□□ -0.84
TMEM87A-204ENST00000561578 FBLN2P98095 1184 aa9.69□□□□□ -0.86
TMEM87A-204ENST00000561578 SLC4A1APQ9BWU0 796 aaKnown RBP9.68□□□□□ -0.86
TMEM87A-204ENST00000561578 MKRN4PQ13434 485 aaPredicted RBP9.67□□□□□ -0.86
TMEM87A-204ENST00000561578 SSUH2Q9Y2M2 353 aa9.66□□□□□ -0.86
TMEM87A-204ENST00000561578 CD44P16070 742 aaKnown RBP9.65□□□□□ -0.86
TMEM87A-204ENST00000561578 ZNF692Q9BU19 519 aaPredicted RBP9.65□□□□□ -0.86
TMEM87A-204ENST00000561578 ZBTB22O15209 634 aa9.63□□□□□ -0.87
TMEM87A-204ENST00000561578 PRR29P0C7W0 189 aa9.6□□□□□ -0.87
TMEM87A-204ENST00000561578 OTUD5Q96G74 571 aa9.56□□□□□ -0.88
TMEM87A-204ENST00000561578 DCBLD2Q96PD2 775 aa9.56□□□□□ -0.88
TMEM87A-204ENST00000561578 POTEMA6NI47 508 aa9.54□□□□□ -0.88
TMEM87A-204ENST00000561578 FARP1Q9Y4F1 1045 aaPredicted RBP9.54□□□□□ -0.88
TMEM87A-204ENST00000561578 PABPN1Q86U42 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
TMEM87A-204ENST00000561578 POTEB2H3BUK9 544 aa9.52□□□□□ -0.89
TMEM87A-204ENST00000561578 ATXN8OSP0DMR3 200 aa9.5□□□□□ -0.89
TMEM87A-204ENST00000561578 POTEGQ6S5H5 508 aa9.49□□□□□ -0.89
TMEM87A-204ENST00000561578 GALR2O43603 387 aaPredicted RBP9.45□□□□□ -0.9
TMEM87A-204ENST00000561578 ZNF579Q8NAF0 562 aaKnown RBP9.43□□□□□ -0.9
TMEM87A-204ENST00000561578 ZRANB1Q9UGI0 708 aa9.43□□□□□ -0.9
TMEM87A-204ENST00000561578 CLCN6P51797 869 aa9.42□□□□□ -0.9
TMEM87A-204ENST00000561578 PELP1Q8IZL8 1130 aaKnown RBP9.34□□□□□ -0.91
TMEM87A-204ENST00000561578 PHF12Q96QT6 1004 aa9.31□□□□□ -0.92
TMEM87A-204ENST00000561578 LCE2DQ5TA82 110 aaPredicted RBP9.3□□□□□ -0.92
TMEM87A-204ENST00000561578 POTEJP0CG39 1038 aa9.28□□□□□ -0.92
TMEM87A-204ENST00000561578 CREBZFQ9NS37 354 aa9.28□□□□□ -0.92
TMEM87A-204ENST00000561578 PCDH10Q9P2E7 1040 aa9.25□□□□□ -0.93
TMEM87A-204ENST00000561578 METRNQ9UJH8 293 aa9.21□□□□□ -0.94
TMEM87A-204ENST00000561578 FAM163AQ96GL9 167 aaPredicted RBP9.2□□□□□ -0.94
TMEM87A-204ENST00000561578 MS4A3Q96HJ5 214 aa9.14□□□□□ -0.95
TMEM87A-204ENST00000561578 ATMINO43313 823 aaPredicted RBP9.13□□□□□ -0.95
TMEM87A-204ENST00000561578 PAK3O75914 559 aaPredicted RBP9.13□□□□□ -0.95
TMEM87A-204ENST00000561578 ASTLQ6HA08 431 aaPredicted RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms