RNA–Protein interactions for RNA: ENST00000561559.1

AC008074.3-201, humanhuman

BASIC

Gene AC008074.3, Length 1,907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008074.3-201ENST00000561559 NISCHQ9Y2I1 1504 aa25.31■■□□□ 1.64
AC008074.3-201ENST00000561559 CCDC180Q9P1Z9 1646 aa22.68■■□□□ 1.22
AC008074.3-201ENST00000561559 ABCC9O60706 1549 aa22.58■■□□□ 1.2
AC008074.3-201ENST00000561559 RB1CC1Q8TDY2 1594 aa21.55■■□□□ 1.04
AC008074.3-201ENST00000561559 NACADO15069 1562 aa21.43■■□□□ 1.02
AC008074.3-201ENST00000561559 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
AC008074.3-201ENST00000561559 MYO15BQ96JP2 1530 aa21.18■□□□□ 0.98
AC008074.3-201ENST00000561559 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
AC008074.3-201ENST00000561559 PABPN1Q86U42 306 aaKnown RBP eCLIP21.03■□□□□ 0.96
AC008074.3-201ENST00000561559 UNC13AQ9UPW8 1703 aa21.01■□□□□ 0.95
AC008074.3-201ENST00000561559 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
AC008074.3-201ENST00000561559 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
AC008074.3-201ENST00000561559 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.94
AC008074.3-201ENST00000561559 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
AC008074.3-201ENST00000561559 SCRIBQ14160 1630 aa20.66■□□□□ 0.9
AC008074.3-201ENST00000561559 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.88
AC008074.3-201ENST00000561559 CC2D2AQ9P2K1 1620 aa20.4■□□□□ 0.86
AC008074.3-201ENST00000561559 EIF4G1Q04637 1599 aaKnown RBP20.39■□□□□ 0.85
AC008074.3-201ENST00000561559 CECR2Q9BXF3 1484 aa20.34■□□□□ 0.85
AC008074.3-201ENST00000561559 NCAPD3P42695 1498 aa19.78■□□□□ 0.76
AC008074.3-201ENST00000561559 SMARCA4P51532 1647 aa19.73■□□□□ 0.75
AC008074.3-201ENST00000561559 ATAD2BQ9ULI0 1458 aa19.72■□□□□ 0.75
AC008074.3-201ENST00000561559 SMARCA2P51531 1590 aa19.68■□□□□ 0.74
AC008074.3-201ENST00000561559 BAZ1AQ9NRL2 1556 aaPredicted RBP19.66■□□□□ 0.74
AC008074.3-201ENST00000561559 HMGXB3Q12766 1538 aa19.64■□□□□ 0.73
AC008074.3-201ENST00000561559 BAZ1BQ9UIG0 1483 aaKnown RBP19.55■□□□□ 0.72
AC008074.3-201ENST00000561559 PEG3Q9GZU2 1588 aa19.54■□□□□ 0.72
AC008074.3-201ENST00000561559 MROH2BQ7Z745 1585 aa19.5■□□□□ 0.71
AC008074.3-201ENST00000561559 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
AC008074.3-201ENST00000561559 CUX2O14529 1486 aa19.44■□□□□ 0.7
AC008074.3-201ENST00000561559 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
AC008074.3-201ENST00000561559 NESP48681 1621 aa19.42■□□□□ 0.7
AC008074.3-201ENST00000561559 LAMC3Q9Y6N6 1575 aa19.31■□□□□ 0.68
AC008074.3-201ENST00000561559 DNAJC5Q9H3Z4 198 aa19.3■□□□□ 0.68
AC008074.3-201ENST00000561559 WIZO95785 1651 aa19.26■□□□□ 0.67
AC008074.3-201ENST00000561559 THOC2Q8NI27 1593 aaKnown RBP19.21■□□□□ 0.67
AC008074.3-201ENST00000561559 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
AC008074.3-201ENST00000561559 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
AC008074.3-201ENST00000561559 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
AC008074.3-201ENST00000561559 RSF1Q96T23 1441 aaPredicted RBP19.14■□□□□ 0.65
AC008074.3-201ENST00000561559 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
AC008074.3-201ENST00000561559 MRC2Q9UBG0 1479 aa19.04■□□□□ 0.64
AC008074.3-201ENST00000561559 WDR62O43379 1518 aa18.98■□□□□ 0.63
AC008074.3-201ENST00000561559 CFTRP13569 1480 aa18.98■□□□□ 0.63
AC008074.3-201ENST00000561559 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
AC008074.3-201ENST00000561559 FANCD2Q9BXW9 1451 aa18.96■□□□□ 0.63
AC008074.3-201ENST00000561559 CCDC88BA6NC98 1476 aa18.82■□□□□ 0.6
AC008074.3-201ENST00000561559 URB2Q14146 1524 aaKnown RBP18.79■□□□□ 0.6
AC008074.3-201ENST00000561559 PRDM2Q13029 1718 aa18.77■□□□□ 0.6
AC008074.3-201ENST00000561559 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
AC008074.3-201ENST00000561559 IFT140Q96RY7 1462 aa18.6■□□□□ 0.57
AC008074.3-201ENST00000561559 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
AC008074.3-201ENST00000561559 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
AC008074.3-201ENST00000561559 DNMBPQ6XZF7 1577 aa18.56■□□□□ 0.56
AC008074.3-201ENST00000561559 ZNF608Q9ULD9 1512 aaPredicted RBP18.54■□□□□ 0.56
AC008074.3-201ENST00000561559 TRIM41Q8WV44 630 aa18.49■□□□□ 0.55
AC008074.3-201ENST00000561559 EIF4G3O43432 1585 aaKnown RBP18.45■□□□□ 0.54
AC008074.3-201ENST00000561559 TARBP1Q13395 1621 aaKnown RBP18.43■□□□□ 0.54
AC008074.3-201ENST00000561559 POLA1P09884 1462 aaPredicted RBP18.42■□□□□ 0.54
AC008074.3-201ENST00000561559 AQRO60306 1485 aaKnown RBP eCLIP18.38■□□□□ 0.53
AC008074.3-201ENST00000561559 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
AC008074.3-201ENST00000561559 RAD54L2Q9Y4B4 1467 aa18.34■□□□□ 0.53
AC008074.3-201ENST00000561559 SOGA1O94964 1423 aa18.34■□□□□ 0.53
AC008074.3-201ENST00000561559 FGD5Q6ZNL6 1462 aa18.33■□□□□ 0.52
AC008074.3-201ENST00000561559 CUX1P39880 1505 aa18.32■□□□□ 0.52
AC008074.3-201ENST00000561559 RIMBP3CA6NJZ7 1639 aa18.29■□□□□ 0.52
AC008074.3-201ENST00000561559 RIMBP3BA6NNM3 1639 aa18.29■□□□□ 0.52
AC008074.3-201ENST00000561559 RIMBP3Q9UFD9 1639 aa18.29■□□□□ 0.52
AC008074.3-201ENST00000561559 TDRD9Q8NDG6 1382 aaKnown RBP18.29■□□□□ 0.52
AC008074.3-201ENST00000561559 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
AC008074.3-201ENST00000561559 CHD1O14646 1710 aa18.28■□□□□ 0.52
AC008074.3-201ENST00000561559 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
AC008074.3-201ENST00000561559 FBLN2P98095 1184 aa18.25■□□□□ 0.51
AC008074.3-201ENST00000561559 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
AC008074.3-201ENST00000561559 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
AC008074.3-201ENST00000561559 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
AC008074.3-201ENST00000561559 CHMP7Q8WUX9 453 aaPredicted RBP18.13■□□□□ 0.49
AC008074.3-201ENST00000561559 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
AC008074.3-201ENST00000561559 ABCA10Q8WWZ4 1543 aa18.12■□□□□ 0.49
AC008074.3-201ENST00000561559 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
AC008074.3-201ENST00000561559 CYB5RLQ6IPT4 315 aa18.1■□□□□ 0.49
AC008074.3-201ENST00000561559 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
AC008074.3-201ENST00000561559 PBRM1Q86U86 1689 aa18.09■□□□□ 0.49
AC008074.3-201ENST00000561559 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
AC008074.3-201ENST00000561559 ABCA5Q8WWZ7 1642 aa18.09■□□□□ 0.49
AC008074.3-201ENST00000561559 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.48
AC008074.3-201ENST00000561559 ARAP1Q96P48 1450 aa18.08■□□□□ 0.48
AC008074.3-201ENST00000561559 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
AC008074.3-201ENST00000561559 BIVM-ERCC5R4GMW8 1640 aa18.05■□□□□ 0.48
AC008074.3-201ENST00000561559 ADAMTS12P58397 1594 aa17.95■□□□□ 0.46
AC008074.3-201ENST00000561559 GRIN2AQ12879 1464 aa17.94■□□□□ 0.46
AC008074.3-201ENST00000561559 FHAD1B1AJZ9 1412 aa17.91■□□□□ 0.46
AC008074.3-201ENST00000561559 ERICH3Q5RHP9 1530 aa17.9■□□□□ 0.46
AC008074.3-201ENST00000561559 NUP160Q12769 1436 aa17.89■□□□□ 0.45
AC008074.3-201ENST00000561559 TRHP20396 242 aaPredicted RBP17.88■□□□□ 0.45
AC008074.3-201ENST00000561559 CEP170Q5SW79 1584 aa17.87■□□□□ 0.45
AC008074.3-201ENST00000561559 ERCC6L2Q5T890 1561 aa17.8■□□□□ 0.44
AC008074.3-201ENST00000561559 SHROOM2Q13796 1616 aa17.79■□□□□ 0.44
AC008074.3-201ENST00000561559 SENP3Q9H4L4 574 aaPredicted RBP17.76■□□□□ 0.43
AC008074.3-201ENST00000561559 KIF27Q86VH2 1401 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms