RNA–Protein interactions for RNA: ENST00000561524.5

KIFC3-208, Transcript of kinesin family member C3, humanhuman

TSL 4

Gene KIFC3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-208ENST00000561524 NISCHQ9Y2I1 1504 aa41.28■■■■■ 4.2
KIFC3-208ENST00000561524 CCDC180Q9P1Z9 1646 aa36.99■■■■□ 3.51
KIFC3-208ENST00000561524 ABCC9O60706 1549 aa36.44■■■■□ 3.42
KIFC3-208ENST00000561524 RB1CC1Q8TDY2 1594 aa34.98■■■■□ 3.19
KIFC3-208ENST00000561524 NACADO15069 1562 aa34.85■■■■□ 3.17
KIFC3-208ENST00000561524 MYO15BQ96JP2 1530 aa34.56■■■■□ 3.12
KIFC3-208ENST00000561524 DCAF8L2P0C7V8 631 aa34.53■■■■□ 3.12
KIFC3-208ENST00000561524 ZCCHC6Q5VYS8 1495 aaKnown RBP34.29■■■■□ 3.08
KIFC3-208ENST00000561524 UNC13AQ9UPW8 1703 aa34.22■■■■□ 3.07
KIFC3-208ENST00000561524 DCAF1Q9Y4B6 1507 aa34.22■■■■□ 3.07
KIFC3-208ENST00000561524 PABPN1Q86U42 306 aaKnown RBP eCLIP33.93■■■■□ 3.02
KIFC3-208ENST00000561524 BICRAQ9NZM4 1560 aa33.9■■■■□ 3.02
KIFC3-208ENST00000561524 DNAJC5BQ9UF47 199 aa33.85■■■■□ 3.01
KIFC3-208ENST00000561524 SHROOM4Q9ULL8 1493 aa33.61■■■□□ 2.97
KIFC3-208ENST00000561524 SCRIBQ14160 1630 aa33.56■■■□□ 2.96
KIFC3-208ENST00000561524 EIF4G1Q04637 1599 aaKnown RBP33.04■■■□□ 2.88
KIFC3-208ENST00000561524 CC2D2AQ9P2K1 1620 aa33.02■■■□□ 2.88
KIFC3-208ENST00000561524 CECR2Q9BXF3 1484 aa32.83■■■□□ 2.85
KIFC3-208ENST00000561524 NCAPD3P42695 1498 aa32.15■■■□□ 2.74
KIFC3-208ENST00000561524 SMARCA4P51532 1647 aa32.13■■■□□ 2.73
KIFC3-208ENST00000561524 ATAD2BQ9ULI0 1458 aa32.05■■■□□ 2.72
KIFC3-208ENST00000561524 BAZ1AQ9NRL2 1556 aaPredicted RBP32.05■■■□□ 2.72
KIFC3-208ENST00000561524 SMARCA2P51531 1590 aa32.03■■■□□ 2.72
KIFC3-208ENST00000561524 HMGXB3Q12766 1538 aa31.95■■■□□ 2.7
KIFC3-208ENST00000561524 PEG3Q9GZU2 1588 aa31.9■■■□□ 2.7
KIFC3-208ENST00000561524 MROH2BQ7Z745 1585 aa31.77■■■□□ 2.68
KIFC3-208ENST00000561524 BAZ1BQ9UIG0 1483 aaKnown RBP31.75■■■□□ 2.67
KIFC3-208ENST00000561524 ERCC6Q03468 1493 aa31.46■■■□□ 2.63
KIFC3-208ENST00000561524 WIZO95785 1651 aa31.42■■■□□ 2.62
KIFC3-208ENST00000561524 NESP48681 1621 aa31.4■■■□□ 2.62
KIFC3-208ENST00000561524 LAMC3Q9Y6N6 1575 aa31.39■■■□□ 2.61
KIFC3-208ENST00000561524 CUX2O14529 1486 aa31.37■■■□□ 2.61
KIFC3-208ENST00000561524 RSF1Q96T23 1441 aaPredicted RBP31.25■■■□□ 2.59
KIFC3-208ENST00000561524 PDS5BQ9NTI5 1447 aa31.15■■■□□ 2.58
KIFC3-208ENST00000561524 CADPSQ9ULU8 1353 aa31.15■■■□□ 2.58
KIFC3-208ENST00000561524 KIF21AQ7Z4S6 1674 aa31.1■■■□□ 2.57
KIFC3-208ENST00000561524 THOC2Q8NI27 1593 aaKnown RBP31.1■■■□□ 2.57
KIFC3-208ENST00000561524 TOP2AP11388 1531 aaKnown RBP31.08■■■□□ 2.57
KIFC3-208ENST00000561524 DNAJC5Q9H3Z4 198 aa30.9■■■□□ 2.54
KIFC3-208ENST00000561524 CFTRP13569 1480 aa30.89■■■□□ 2.53
KIFC3-208ENST00000561524 MRC2Q9UBG0 1479 aa30.82■■■□□ 2.53
KIFC3-208ENST00000561524 WDR62O43379 1518 aa30.78■■■□□ 2.52
KIFC3-208ENST00000561524 CEP164Q9UPV0 1460 aa30.77■■■□□ 2.52
KIFC3-208ENST00000561524 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.52
KIFC3-208ENST00000561524 PRDM2Q13029 1718 aa30.72■■■□□ 2.51
KIFC3-208ENST00000561524 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.5
KIFC3-208ENST00000561524 URB2Q14146 1524 aaKnown RBP30.48■■■□□ 2.47
KIFC3-208ENST00000561524 ABCC8Q09428 1581 aa30.3■■■□□ 2.44
KIFC3-208ENST00000561524 TOPBP1Q92547 1522 aa30.24■■■□□ 2.43
KIFC3-208ENST00000561524 DNMBPQ6XZF7 1577 aa30.19■■■□□ 2.42
KIFC3-208ENST00000561524 IFT140Q96RY7 1462 aa30.18■■■□□ 2.42
KIFC3-208ENST00000561524 SUPT5HO00267 1087 aaKnown RBP30.02■■■□□ 2.4
KIFC3-208ENST00000561524 ZNF608Q9ULD9 1512 aaPredicted RBP30.01■■■□□ 2.4
KIFC3-208ENST00000561524 TARBP1Q13395 1621 aaKnown RBP29.97■■■□□ 2.39
KIFC3-208ENST00000561524 OSCARQ8IYS5 282 aa29.96■■■□□ 2.39
KIFC3-208ENST00000561524 POLA1P09884 1462 aaPredicted RBP29.94■■■□□ 2.38
KIFC3-208ENST00000561524 EIF4G3O43432 1585 aaKnown RBP29.92■■■□□ 2.38
KIFC3-208ENST00000561524 CUX1P39880 1505 aa29.82■■■□□ 2.36
KIFC3-208ENST00000561524 SOGA1O94964 1423 aa29.81■■■□□ 2.36
KIFC3-208ENST00000561524 WDR97A6NE52 1622 aa29.8■■■□□ 2.36
KIFC3-208ENST00000561524 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
KIFC3-208ENST00000561524 AQRO60306 1485 aaKnown RBP eCLIP29.79■■■□□ 2.363e-9■■■■■ 42.8
KIFC3-208ENST00000561524 RAD54L2Q9Y4B4 1467 aa29.78■■■□□ 2.36
KIFC3-208ENST00000561524 TDRD9Q8NDG6 1382 aaKnown RBP29.65■■■□□ 2.34
KIFC3-208ENST00000561524 CHD1O14646 1710 aa29.65■■■□□ 2.34
KIFC3-208ENST00000561524 TRIM41Q8WV44 630 aa29.56■■■□□ 2.32
KIFC3-208ENST00000561524 ABCA10Q8WWZ4 1543 aa29.54■■■□□ 2.32
KIFC3-208ENST00000561524 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
KIFC3-208ENST00000561524 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
KIFC3-208ENST00000561524 MAGI1Q96QZ7 1491 aaPredicted RBP29.53■■■□□ 2.32
KIFC3-208ENST00000561524 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
KIFC3-208ENST00000561524 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
KIFC3-208ENST00000561524 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
KIFC3-208ENST00000561524 SNAPC4Q5SXM2 1469 aa29.51■■■□□ 2.31
KIFC3-208ENST00000561524 TOP2BQ02880 1626 aa29.51■■■□□ 2.31
KIFC3-208ENST00000561524 WRNQ14191 1432 aaPredicted RBP eCLIP29.48■■■□□ 2.31
KIFC3-208ENST00000561524 PBRM1Q86U86 1689 aa29.48■■■□□ 2.31
KIFC3-208ENST00000561524 FBLN2P98095 1184 aa29.47■■■□□ 2.31
KIFC3-208ENST00000561524 GAPVD1Q14C86 1478 aa29.47■■■□□ 2.31
KIFC3-208ENST00000561524 ARHGEF11O15085 1522 aa29.46■■■□□ 2.31
KIFC3-208ENST00000561524 ABCA5Q8WWZ7 1642 aa29.45■■■□□ 2.31
KIFC3-208ENST00000561524 SYNJ1O43426 1573 aa29.42■■■□□ 2.3
KIFC3-208ENST00000561524 SYNJ2O15056 1496 aa29.4■■■□□ 2.3
KIFC3-208ENST00000561524 CHMP7Q8WUX9 453 aaPredicted RBP29.39■■■□□ 2.3
KIFC3-208ENST00000561524 CLASP1Q7Z460 1538 aa29.32■■■□□ 2.28
KIFC3-208ENST00000561524 ERICH3Q5RHP9 1530 aa29.2■■■□□ 2.26
KIFC3-208ENST00000561524 ADAMTS12P58397 1594 aa29.18■■■□□ 2.26
KIFC3-208ENST00000561524 ARAP1Q96P48 1450 aa29.17■■■□□ 2.26
KIFC3-208ENST00000561524 CYB5RLQ6IPT4 315 aa29.16■■■□□ 2.26
KIFC3-208ENST00000561524 GRIN2AQ12879 1464 aa29.15■■■□□ 2.26
KIFC3-208ENST00000561524 FHAD1B1AJZ9 1412 aa29.12■■■□□ 2.25
KIFC3-208ENST00000561524 NUP160Q12769 1436 aa29.05■■■□□ 2.24
KIFC3-208ENST00000561524 CEP170Q5SW79 1584 aa29.01■■■□□ 2.24
KIFC3-208ENST00000561524 SHROOM2Q13796 1616 aa28.93■■■□□ 2.22
KIFC3-208ENST00000561524 KIF27Q86VH2 1401 aa28.92■■■□□ 2.22
KIFC3-208ENST00000561524 CUL7Q14999 1698 aa28.85■■■□□ 2.21
KIFC3-208ENST00000561524 IGF1RP08069 1367 aa28.85■■■□□ 2.21
KIFC3-208ENST00000561524 ERCC6L2Q5T890 1561 aa28.81■■■□□ 2.2
KIFC3-208ENST00000561524 RUSC2Q8N2Y8 1516 aa28.76■■■□□ 2.19
KIFC3-208ENST00000561524 JPH4Q96JJ6 628 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms