RNA–Protein interactions for RNA: ENST00000561477.1

CDK10-216, Transcript of cyclin dependent kinase 10, humanhuman

TSL 3

Gene CDK10, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK10-216ENST00000561477 NISCHQ9Y2I1 1504 aa38.51■■■■□ 3.76
CDK10-216ENST00000561477 ABCC9O60706 1549 aa34.55■■■■□ 3.12
CDK10-216ENST00000561477 CCDC180Q9P1Z9 1646 aa34.54■■■■□ 3.12
CDK10-216ENST00000561477 RB1CC1Q8TDY2 1594 aa32.86■■■□□ 2.85
CDK10-216ENST00000561477 NACADO15069 1562 aa32.63■■■□□ 2.81
CDK10-216ENST00000561477 DCAF8L2P0C7V8 631 aa32.48■■■□□ 2.79
CDK10-216ENST00000561477 DNAJC5BQ9UF47 199 aa32.36■■■□□ 2.77
CDK10-216ENST00000561477 MYO15BQ96JP2 1530 aa32.17■■■□□ 2.74
CDK10-216ENST00000561477 PABPN1Q86U42 306 aaKnown RBP eCLIP32.16■■■□□ 2.74
CDK10-216ENST00000561477 UNC13AQ9UPW8 1703 aa32.14■■■□□ 2.74
CDK10-216ENST00000561477 ZCCHC6Q5VYS8 1495 aaKnown RBP31.95■■■□□ 2.7
CDK10-216ENST00000561477 BICRAQ9NZM4 1560 aa31.94■■■□□ 2.7
CDK10-216ENST00000561477 DCAF1Q9Y4B6 1507 aa31.79■■■□□ 2.68
CDK10-216ENST00000561477 SCRIBQ14160 1630 aa31.53■■■□□ 2.64
CDK10-216ENST00000561477 SHROOM4Q9ULL8 1493 aa31.45■■■□□ 2.62
CDK10-216ENST00000561477 CC2D2AQ9P2K1 1620 aa31.2■■■□□ 2.58
CDK10-216ENST00000561477 EIF4G1Q04637 1599 aaKnown RBP31.14■■■□□ 2.58
CDK10-216ENST00000561477 CECR2Q9BXF3 1484 aa31.1■■■□□ 2.57
CDK10-216ENST00000561477 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
CDK10-216ENST00000561477 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
CDK10-216ENST00000561477 SMARCA4P51532 1647 aa30.05■■■□□ 2.4
CDK10-216ENST00000561477 SMARCA2P51531 1590 aa29.97■■■□□ 2.39
CDK10-216ENST00000561477 HMGXB3Q12766 1538 aa29.92■■■□□ 2.38
CDK10-216ENST00000561477 BAZ1AQ9NRL2 1556 aaPredicted RBP29.88■■■□□ 2.37
CDK10-216ENST00000561477 ERCC6Q03468 1493 aa29.81■■■□□ 2.36
CDK10-216ENST00000561477 BAZ1BQ9UIG0 1483 aaKnown RBP29.78■■■□□ 2.36
CDK10-216ENST00000561477 PEG3Q9GZU2 1588 aa29.73■■■□□ 2.35
CDK10-216ENST00000561477 CUX2O14529 1486 aa29.72■■■□□ 2.35
CDK10-216ENST00000561477 MROH2BQ7Z745 1585 aa29.7■■■□□ 2.35
CDK10-216ENST00000561477 NESP48681 1621 aa29.7■■■□□ 2.34
CDK10-216ENST00000561477 DNAJC5Q9H3Z4 198 aa29.65■■■□□ 2.34
CDK10-216ENST00000561477 LAMC3Q9Y6N6 1575 aa29.45■■■□□ 2.31
CDK10-216ENST00000561477 THOC2Q8NI27 1593 aaKnown RBP29.39■■■□□ 2.29
CDK10-216ENST00000561477 WIZO95785 1651 aa29.35■■■□□ 2.29
CDK10-216ENST00000561477 KIF21AQ7Z4S6 1674 aa29.31■■■□□ 2.28
CDK10-216ENST00000561477 PDS5BQ9NTI5 1447 aa29.27■■■□□ 2.28
CDK10-216ENST00000561477 CADPSQ9ULU8 1353 aa29.21■■■□□ 2.27
CDK10-216ENST00000561477 RSF1Q96T23 1441 aaPredicted RBP29.08■■■□□ 2.25
CDK10-216ENST00000561477 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
CDK10-216ENST00000561477 WDR62O43379 1518 aa28.98■■■□□ 2.23
CDK10-216ENST00000561477 TOP2AP11388 1531 aaKnown RBP28.97■■■□□ 2.23
CDK10-216ENST00000561477 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
CDK10-216ENST00000561477 FANCD2Q9BXW9 1451 aa28.91■■■□□ 2.22
CDK10-216ENST00000561477 CFTRP13569 1480 aa28.9■■■□□ 2.22
CDK10-216ENST00000561477 URB2Q14146 1524 aaKnown RBP28.69■■■□□ 2.18
CDK10-216ENST00000561477 CCDC88BA6NC98 1476 aa28.64■■■□□ 2.17
CDK10-216ENST00000561477 PRDM2Q13029 1718 aa28.61■■■□□ 2.17
CDK10-216ENST00000561477 TRIM41Q8WV44 630 aa28.42■■■□□ 2.14
CDK10-216ENST00000561477 TOPBP1Q92547 1522 aa28.37■■■□□ 2.13
CDK10-216ENST00000561477 IFT140Q96RY7 1462 aa28.34■■■□□ 2.13
CDK10-216ENST00000561477 OSCARQ8IYS5 282 aa28.34■■■□□ 2.13
CDK10-216ENST00000561477 ZNF608Q9ULD9 1512 aaPredicted RBP28.33■■■□□ 2.13
CDK10-216ENST00000561477 DNMBPQ6XZF7 1577 aa28.26■■■□□ 2.11
CDK10-216ENST00000561477 ABCC8Q09428 1581 aa28.25■■■□□ 2.11
CDK10-216ENST00000561477 EIF4G3O43432 1585 aaKnown RBP28.18■■■□□ 2.1
CDK10-216ENST00000561477 TARBP1Q13395 1621 aaKnown RBP28.11■■■□□ 2.09
CDK10-216ENST00000561477 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
CDK10-216ENST00000561477 AQRO60306 1485 aaKnown RBP eCLIP28.07■■■□□ 2.083e-7■■■■□ 21.9
CDK10-216ENST00000561477 RIMBP3CA6NJZ7 1639 aa28.03■■■□□ 2.08
CDK10-216ENST00000561477 RIMBP3BA6NNM3 1639 aa28.03■■■□□ 2.08
CDK10-216ENST00000561477 RIMBP3Q9UFD9 1639 aa28.03■■■□□ 2.08
CDK10-216ENST00000561477 RAD54L2Q9Y4B4 1467 aa27.99■■■□□ 2.07
CDK10-216ENST00000561477 CHD1O14646 1710 aa27.95■■■□□ 2.07
CDK10-216ENST00000561477 ARHGEF11O15085 1522 aa27.94■■■□□ 2.06
CDK10-216ENST00000561477 SOGA1O94964 1423 aa27.93■■■□□ 2.06
CDK10-216ENST00000561477 FGD5Q6ZNL6 1462 aa27.92■■■□□ 2.06
CDK10-216ENST00000561477 CUX1P39880 1505 aa27.91■■■□□ 2.06
CDK10-216ENST00000561477 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
CDK10-216ENST00000561477 TDRD9Q8NDG6 1382 aaKnown RBP27.89■■■□□ 2.06
CDK10-216ENST00000561477 FBLN2P98095 1184 aa27.86■■■□□ 2.05
CDK10-216ENST00000561477 WDR97A6NE52 1622 aa27.79■■■□□ 2.04
CDK10-216ENST00000561477 SNAPC4Q5SXM2 1469 aa27.79■■■□□ 2.04
CDK10-216ENST00000561477 CYB5RLQ6IPT4 315 aa27.71■■■□□ 2.03
CDK10-216ENST00000561477 GRIN2BQ13224 1484 aa27.69■■■□□ 2.02
CDK10-216ENST00000561477 ARAP1Q96P48 1450 aa27.69■■■□□ 2.02
CDK10-216ENST00000561477 MAGI1Q96QZ7 1491 aaPredicted RBP27.69■■■□□ 2.02
CDK10-216ENST00000561477 CHMP7Q8WUX9 453 aaPredicted RBP27.64■■■□□ 2.02
CDK10-216ENST00000561477 CLASP1Q7Z460 1538 aa27.63■■■□□ 2.01
CDK10-216ENST00000561477 PBRM1Q86U86 1689 aa27.61■■■□□ 2.01
CDK10-216ENST00000561477 SYNJ2O15056 1496 aa27.6■■■□□ 2.01
CDK10-216ENST00000561477 GAPVD1Q14C86 1478 aa27.6■■■□□ 2.01
CDK10-216ENST00000561477 SYNJ1O43426 1573 aa27.6■■■□□ 2.01
CDK10-216ENST00000561477 ABCA10Q8WWZ4 1543 aa27.58■■■□□ 2.01
CDK10-216ENST00000561477 ABCA5Q8WWZ7 1642 aa27.56■■■□□ 2
CDK10-216ENST00000561477 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.992e-6■■■■□ 22.3
CDK10-216ENST00000561477 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.99
CDK10-216ENST00000561477 TOP2BQ02880 1626 aa27.45■■□□□ 1.98
CDK10-216ENST00000561477 TRHP20396 242 aaPredicted RBP27.39■■□□□ 1.98
CDK10-216ENST00000561477 ADAMTS12P58397 1594 aa27.36■■□□□ 1.97
CDK10-216ENST00000561477 GRIN2AQ12879 1464 aa27.35■■□□□ 1.97
CDK10-216ENST00000561477 CEP170Q5SW79 1584 aa27.27■■□□□ 1.96
CDK10-216ENST00000561477 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
CDK10-216ENST00000561477 NUP160Q12769 1436 aa27.24■■□□□ 1.95
CDK10-216ENST00000561477 ERCC6L2Q5T890 1561 aa27.23■■□□□ 1.95
CDK10-216ENST00000561477 ERICH3Q5RHP9 1530 aa27.23■■□□□ 1.95
CDK10-216ENST00000561477 SHROOM2Q13796 1616 aa27.13■■□□□ 1.93
CDK10-216ENST00000561477 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
CDK10-216ENST00000561477 RUSC2Q8N2Y8 1516 aa26.98■■□□□ 1.91
CDK10-216ENST00000561477 JPH4Q96JJ6 628 aa26.94■■□□□ 1.9
CDK10-216ENST00000561477 KIF27Q86VH2 1401 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms