RNA–Protein interactions for RNA: ENST00000561229.1
Retrieved 5 of 5 RNA–protein pairs in 7 ms
AAGAB-206, Transcript of alpha and gamma adaptin binding protein, human
TSL 4
Gene AAGAB, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .
RNA | Protein | Prediction (catRAPID) | Interaction (ENCODE eCLIP) | ||||||
---|---|---|---|---|---|---|---|---|---|
Transcript Symbol | Ensembl Transcript ID | Gene | UniProt Accession | Length | Protein Status | Prediction Score | Prediction z-Score | p-Value | Fold Change |
AAGAB-206 | ENST00000561229 | DDX3X | O00571 | 662 aa | Known RBP eCLIP | 14.84 | □□□□□ -0.03 | 1e-15 | ■■■■■ 77 |
AAGAB-206 | ENST00000561229 | NOLC1 | Q14978 | 699 aa | Known RBP eCLIP | 15.51 | ■□□□□ 0.07 | 2e-6 | ■■■■□ 23.7 |
AAGAB-206 | ENST00000561229 | PTBP1 | P26599 | 531 aa | Known RBP eCLIP | 11.28 | □□□□□ -0.6 | 1e-8 | ■■■■□ 19.5 |
AAGAB-206 | ENST00000561229 | XRCC6 | P12956 | 609 aa | Known RBP eCLIP | 15.79 | ■□□□□ 0.12 | 5e-6 | ■■□□□ 14.4 |
AAGAB-206 | ENST00000561229 | KHSRP | Q92945 | 711 aa | Known RBP eCLIP | 15.66 | ■□□□□ 0.1 | 5e-7 | ■■□□□ 12.4 |