RNA–Protein interactions for RNA: ENST00000561095.1

TICRR-203, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

TSL 1 (best)

Gene TICRR, Length 2,367 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-203ENST00000561095 NISCHQ9Y2I1 1504 aa27.4■■□□□ 1.98
TICRR-203ENST00000561095 HRCP23327 699 aa24.9■■□□□ 1.58
TICRR-203ENST00000561095 PELP1Q8IZL8 1130 aaKnown RBP24.3■■□□□ 1.48
TICRR-203ENST00000561095 PPARGC1BQ86YN6 1023 aaKnown RBP24.24■■□□□ 1.47
TICRR-203ENST00000561095 PCGF6Q9BYE7 350 aa24.18■■□□□ 1.46
TICRR-203ENST00000561095 MYO15BQ96JP2 1530 aa24.17■■□□□ 1.46
TICRR-203ENST00000561095 SHROOM4Q9ULL8 1493 aa24.1■■□□□ 1.45
TICRR-203ENST00000561095 SUPT5HO00267 1087 aaKnown RBP24.08■■□□□ 1.44
TICRR-203ENST00000561095 CHIC1Q5VXU3 224 aa23.93■■□□□ 1.42
TICRR-203ENST00000561095 DCAF1Q9Y4B6 1507 aa23.8■■□□□ 1.4
TICRR-203ENST00000561095 SCAF1Q9H7N4 1312 aaKnown RBP23.61■■□□□ 1.37
TICRR-203ENST00000561095 CCDC180Q9P1Z9 1646 aa23.56■■□□□ 1.36
TICRR-203ENST00000561095 TRIM26Q12899 539 aaPredicted RBP23.47■■□□□ 1.35
TICRR-203ENST00000561095 MYT1Q01538 1121 aa23.41■■□□□ 1.34
TICRR-203ENST00000561095 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
TICRR-203ENST00000561095 ZEB1P37275 1124 aaPredicted RBP23.37■■□□□ 1.33
TICRR-203ENST00000561095 LOC105371045A0A1W2PR82 267 aa23.28■■□□□ 1.32
TICRR-203ENST00000561095 ACIN1Q9UKV3 1341 aaKnown RBP23■■□□□ 1.27
TICRR-203ENST00000561095 NEUROD1Q13562 356 aa22.89■■□□□ 1.26
TICRR-203ENST00000561095 GTF3C3Q9Y5Q9 886 aa22.75■■□□□ 1.23
TICRR-203ENST00000561095 CENPBP07199 599 aaPredicted RBP22.63■■□□□ 1.21
TICRR-203ENST00000561095 DIEXFQ68CQ4 756 aaKnown RBP22.47■■□□□ 1.19
TICRR-203ENST00000561095 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.18
TICRR-203ENST00000561095 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.35■■□□□ 1.17
TICRR-203ENST00000561095 TRIM41Q8WV44 630 aa22.32■■□□□ 1.16
TICRR-203ENST00000561095 CCER1Q8TC90 406 aaPredicted RBP22.31■■□□□ 1.16
TICRR-203ENST00000561095 ABCC9O60706 1549 aa22.26■■□□□ 1.15
TICRR-203ENST00000561095 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
TICRR-203ENST00000561095 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
TICRR-203ENST00000561095 TTBK1Q5TCY1 1321 aaPredicted RBP22.05■■□□□ 1.12
TICRR-203ENST00000561095 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
TICRR-203ENST00000561095 ZNF316A6NFI3 1004 aaPredicted RBP22.04■■□□□ 1.12
TICRR-203ENST00000561095 EHMT2Q96KQ7 1210 aa22.01■■□□□ 1.11
TICRR-203ENST00000561095 YTHDC1Q96MU7 727 aaKnown RBP21.98■■□□□ 1.11
TICRR-203ENST00000561095 MIER1Q8N108 512 aa21.89■■□□□ 1.09
TICRR-203ENST00000561095 WRNQ14191 1432 aaPredicted RBP eCLIP21.83■■□□□ 1.08
TICRR-203ENST00000561095 BCL11AQ9H165 835 aa21.8■■□□□ 1.08
TICRR-203ENST00000561095 ANP32EQ9BTT0 268 aa21.76■■□□□ 1.07
TICRR-203ENST00000561095 CLSPNQ9HAW4 1339 aa21.74■■□□□ 1.07
TICRR-203ENST00000561095 SUPT16HQ9Y5B9 1047 aaKnown RBP21.67■■□□□ 1.06
TICRR-203ENST00000561095 TSHZ2Q9NRE2 1034 aa21.63■■□□□ 1.05
TICRR-203ENST00000561095 SCRIBQ14160 1630 aa21.59■■□□□ 1.05
TICRR-203ENST00000561095 CEP162Q5TB80 1403 aa21.55■■□□□ 1.04
TICRR-203ENST00000561095 EIF4G1Q04637 1599 aaKnown RBP21.52■■□□□ 1.03
TICRR-203ENST00000561095 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
TICRR-203ENST00000561095 TNIKQ9UKE5 1360 aa21.44■■□□□ 1.02
TICRR-203ENST00000561095 MROH2BQ7Z745 1585 aa21.38■■□□□ 1.01
TICRR-203ENST00000561095 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
TICRR-203ENST00000561095 WIZO95785 1651 aa21.34■■□□□ 1.01
TICRR-203ENST00000561095 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
TICRR-203ENST00000561095 HNRNPUL2Q1KMD3 747 aaKnown RBP21.26■□□□□ 0.99
TICRR-203ENST00000561095 ABCC8Q09428 1581 aa21.26■□□□□ 0.99
TICRR-203ENST00000561095 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
TICRR-203ENST00000561095 SOGA1O94964 1423 aa21.21■□□□□ 0.99
TICRR-203ENST00000561095 EEA1Q15075 1411 aa21.18■□□□□ 0.98
TICRR-203ENST00000561095 GOLGA3Q08378 1498 aa21.12■□□□□ 0.97
TICRR-203ENST00000561095 UBTFP17480 764 aaKnown RBP21.11■□□□□ 0.97
TICRR-203ENST00000561095 NACADO15069 1562 aa21.09■□□□□ 0.97
TICRR-203ENST00000561095 RBM19Q9Y4C8 960 aaKnown RBP21.09■□□□□ 0.97
TICRR-203ENST00000561095 RUSC2Q8N2Y8 1516 aa21.08■□□□□ 0.96
TICRR-203ENST00000561095 DHX57Q6P158 1386 aaKnown RBP21.05■□□□□ 0.96
TICRR-203ENST00000561095 BCANQ96GW7 911 aa21.03■□□□□ 0.96
TICRR-203ENST00000561095 FKBP8Q14318 412 aa20.99■□□□□ 0.95
TICRR-203ENST00000561095 PRKCSHP14314 528 aaPredicted RBP20.99■□□□□ 0.95
TICRR-203ENST00000561095 VPS8Q8N3P4 1428 aa20.98■□□□□ 0.95
TICRR-203ENST00000561095 KCNH8Q96L42 1107 aa20.97■□□□□ 0.95
TICRR-203ENST00000561095 CLIP1P30622 1438 aa20.96■□□□□ 0.95
TICRR-203ENST00000561095 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
TICRR-203ENST00000561095 MSH5O43196 834 aa20.94■□□□□ 0.94
TICRR-203ENST00000561095 KIF21BO75037 1637 aa20.91■□□□□ 0.94
TICRR-203ENST00000561095 SMARCA2P51531 1590 aa20.91■□□□□ 0.94
TICRR-203ENST00000561095 CEP164Q9UPV0 1460 aa20.89■□□□□ 0.93
TICRR-203ENST00000561095 APLP2Q06481 763 aa20.81■□□□□ 0.92
TICRR-203ENST00000561095 FANCIQ9NVI1 1328 aa20.81■□□□□ 0.92
TICRR-203ENST00000561095 NEFLP07196 543 aa20.79■□□□□ 0.92
TICRR-203ENST00000561095 BAZ1BQ9UIG0 1483 aaKnown RBP20.78■□□□□ 0.92
TICRR-203ENST00000561095 ITGAEP38570 1179 aa20.75■□□□□ 0.91
TICRR-203ENST00000561095 CUX2O14529 1486 aa20.75■□□□□ 0.91
TICRR-203ENST00000561095 MYT1LQ9UL68 1186 aa20.7■□□□□ 0.9
TICRR-203ENST00000561095 SMARCA4P51532 1647 aa20.67■□□□□ 0.9
TICRR-203ENST00000561095 RRBP1Q9P2E9 1410 aaKnown RBP20.66■□□□□ 0.9
TICRR-203ENST00000561095 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.89
TICRR-203ENST00000561095 CCER2I3L3R5 266 aa20.61■□□□□ 0.89
TICRR-203ENST00000561095 ERICH6Q7L0X2 663 aa20.61■□□□□ 0.89
TICRR-203ENST00000561095 DDX10Q13206 875 aaKnown RBP20.6■□□□□ 0.89
TICRR-203ENST00000561095 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
TICRR-203ENST00000561095 PPP1R15AO75807 674 aaPredicted RBP20.6■□□□□ 0.89
TICRR-203ENST00000561095 MAPKBP1O60336 1514 aa20.6■□□□□ 0.89
TICRR-203ENST00000561095 DEKP35659 375 aaKnown RBP20.57■□□□□ 0.88
TICRR-203ENST00000561095 TRIM52Q96A61 297 aa20.57■□□□□ 0.88
TICRR-203ENST00000561095 KANK4Q5T7N3 995 aaPredicted RBP20.54■□□□□ 0.88
TICRR-203ENST00000561095 CDK11AQ9UQ88 783 aaPredicted RBP20.54■□□□□ 0.88
TICRR-203ENST00000561095 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
TICRR-203ENST00000561095 ARAP1Q96P48 1450 aa20.52■□□□□ 0.87
TICRR-203ENST00000561095 CCNB3Q8WWL7 1395 aa20.47■□□□□ 0.87
TICRR-203ENST00000561095 RAB3GAP2Q9H2M9 1393 aa20.45■□□□□ 0.86
TICRR-203ENST00000561095 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
TICRR-203ENST00000561095 ANP32CO43423 234 aa20.43■□□□□ 0.86
TICRR-203ENST00000561095 UNC13AQ9UPW8 1703 aa20.43■□□□□ 0.86
TICRR-203ENST00000561095 ANO8Q9HCE9 1232 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms