RNA–Protein interactions for RNA: ENST00000560958.1

ACTG1P17-202, Transcript of actin gamma 1 pseudogene 17, humanhuman

TSL 2 BASIC

Gene ACTG1P17, Length 1,662 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1P17-202ENST00000560958 NISCHQ9Y2I1 1504 aa34■■■■□ 3.03
ACTG1P17-202ENST00000560958 CCDC180Q9P1Z9 1646 aa29.98■■■□□ 2.39
ACTG1P17-202ENST00000560958 ABCC9O60706 1549 aa28.99■■■□□ 2.23
ACTG1P17-202ENST00000560958 DCAF8L2P0C7V8 631 aa28.39■■■□□ 2.14
ACTG1P17-202ENST00000560958 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
ACTG1P17-202ENST00000560958 NACADO15069 1562 aa28.12■■■□□ 2.09
ACTG1P17-202ENST00000560958 DCAF1Q9Y4B6 1507 aa28.12■■■□□ 2.09
ACTG1P17-202ENST00000560958 MYO15BQ96JP2 1530 aa28.08■■■□□ 2.09
ACTG1P17-202ENST00000560958 RB1CC1Q8TDY2 1594 aa28.05■■■□□ 2.08
ACTG1P17-202ENST00000560958 SCRIBQ14160 1630 aa27.42■■□□□ 1.98
ACTG1P17-202ENST00000560958 UNC13AQ9UPW8 1703 aa27.41■■□□□ 1.98
ACTG1P17-202ENST00000560958 PABPN1Q86U42 306 aaKnown RBP eCLIP27.24■■□□□ 1.95
ACTG1P17-202ENST00000560958 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
ACTG1P17-202ENST00000560958 BICRAQ9NZM4 1560 aa27.17■■□□□ 1.94
ACTG1P17-202ENST00000560958 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
ACTG1P17-202ENST00000560958 EIF4G1Q04637 1599 aaKnown RBP26.43■■□□□ 1.82
ACTG1P17-202ENST00000560958 BAZ1AQ9NRL2 1556 aaPredicted RBP26.31■■□□□ 1.8
ACTG1P17-202ENST00000560958 DNAJC5BQ9UF47 199 aa26.28■■□□□ 1.8
ACTG1P17-202ENST00000560958 SMARCA4P51532 1647 aa26.26■■□□□ 1.79
ACTG1P17-202ENST00000560958 CC2D2AQ9P2K1 1620 aa26.23■■□□□ 1.79
ACTG1P17-202ENST00000560958 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
ACTG1P17-202ENST00000560958 RSF1Q96T23 1441 aaPredicted RBP26.08■■□□□ 1.77
ACTG1P17-202ENST00000560958 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
ACTG1P17-202ENST00000560958 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
ACTG1P17-202ENST00000560958 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
ACTG1P17-202ENST00000560958 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
ACTG1P17-202ENST00000560958 WIZO95785 1651 aa25.95■■□□□ 1.74
ACTG1P17-202ENST00000560958 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
ACTG1P17-202ENST00000560958 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
ACTG1P17-202ENST00000560958 HMGXB3Q12766 1538 aa25.83■■□□□ 1.73
ACTG1P17-202ENST00000560958 TOP2AP11388 1531 aaKnown RBP25.67■■□□□ 1.7
ACTG1P17-202ENST00000560958 CCDC88BA6NC98 1476 aa25.42■■□□□ 1.66
ACTG1P17-202ENST00000560958 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
ACTG1P17-202ENST00000560958 NESP48681 1621 aa25.21■■□□□ 1.63
ACTG1P17-202ENST00000560958 LAMC3Q9Y6N6 1575 aa25.19■■□□□ 1.62
ACTG1P17-202ENST00000560958 CFTRP13569 1480 aa25.17■■□□□ 1.62
ACTG1P17-202ENST00000560958 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
ACTG1P17-202ENST00000560958 ERCC6Q03468 1493 aa24.96■■□□□ 1.59
ACTG1P17-202ENST00000560958 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
ACTG1P17-202ENST00000560958 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
ACTG1P17-202ENST00000560958 KIF21AQ7Z4S6 1674 aa24.89■■□□□ 1.58
ACTG1P17-202ENST00000560958 CEP164Q9UPV0 1460 aa24.87■■□□□ 1.57
ACTG1P17-202ENST00000560958 MRC2Q9UBG0 1479 aa24.73■■□□□ 1.55
ACTG1P17-202ENST00000560958 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
ACTG1P17-202ENST00000560958 URB2Q14146 1524 aaKnown RBP24.65■■□□□ 1.54
ACTG1P17-202ENST00000560958 ABCC8Q09428 1581 aa24.64■■□□□ 1.53
ACTG1P17-202ENST00000560958 WDR62O43379 1518 aa24.61■■□□□ 1.53
ACTG1P17-202ENST00000560958 WRNQ14191 1432 aaPredicted RBP eCLIP24.59■■□□□ 1.53
ACTG1P17-202ENST00000560958 TOPBP1Q92547 1522 aa24.58■■□□□ 1.53
ACTG1P17-202ENST00000560958 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
ACTG1P17-202ENST00000560958 CUX1P39880 1505 aa24.55■■□□□ 1.52
ACTG1P17-202ENST00000560958 CUX2O14529 1486 aa24.51■■□□□ 1.51
ACTG1P17-202ENST00000560958 TOP2BQ02880 1626 aa24.45■■□□□ 1.5
ACTG1P17-202ENST00000560958 SYNJ1O43426 1573 aa24.45■■□□□ 1.5
ACTG1P17-202ENST00000560958 BIVM-ERCC5R4GMW8 1640 aa24.42■■□□□ 1.5
ACTG1P17-202ENST00000560958 POLA1P09884 1462 aaPredicted RBP24.4■■□□□ 1.5
ACTG1P17-202ENST00000560958 FGD5Q6ZNL6 1462 aa24.4■■□□□ 1.5
ACTG1P17-202ENST00000560958 TRIM41Q8WV44 630 aa24.4■■□□□ 1.5
ACTG1P17-202ENST00000560958 SOGA1O94964 1423 aa24.36■■□□□ 1.49
ACTG1P17-202ENST00000560958 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
ACTG1P17-202ENST00000560958 IFT140Q96RY7 1462 aa24.33■■□□□ 1.48
ACTG1P17-202ENST00000560958 RAD54L2Q9Y4B4 1467 aa24.31■■□□□ 1.48
ACTG1P17-202ENST00000560958 TARBP1Q13395 1621 aaKnown RBP24.27■■□□□ 1.48
ACTG1P17-202ENST00000560958 ABCA10Q8WWZ4 1543 aa24.19■■□□□ 1.46
ACTG1P17-202ENST00000560958 TDRD9Q8NDG6 1382 aaKnown RBP24.18■■□□□ 1.46
ACTG1P17-202ENST00000560958 ZNF608Q9ULD9 1512 aaPredicted RBP24.18■■□□□ 1.46
ACTG1P17-202ENST00000560958 AQRO60306 1485 aaKnown RBP eCLIP24.14■■□□□ 1.461e-6■■■■□ 23.1
ACTG1P17-202ENST00000560958 WDR97A6NE52 1622 aa24.12■■□□□ 1.45
ACTG1P17-202ENST00000560958 EIF4G3O43432 1585 aaKnown RBP24.06■■□□□ 1.44
ACTG1P17-202ENST00000560958 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
ACTG1P17-202ENST00000560958 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
ACTG1P17-202ENST00000560958 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.43
ACTG1P17-202ENST00000560958 GRIN2BQ13224 1484 aa23.99■■□□□ 1.43
ACTG1P17-202ENST00000560958 RUSC2Q8N2Y8 1516 aa23.96■■□□□ 1.43
ACTG1P17-202ENST00000560958 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
ACTG1P17-202ENST00000560958 IGF1RP08069 1367 aa23.92■■□□□ 1.42
ACTG1P17-202ENST00000560958 ERICH3Q5RHP9 1530 aa23.91■■□□□ 1.42
ACTG1P17-202ENST00000560958 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
ACTG1P17-202ENST00000560958 SNAPC4Q5SXM2 1469 aa23.88■■□□□ 1.41
ACTG1P17-202ENST00000560958 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
ACTG1P17-202ENST00000560958 EEA1Q15075 1411 aa23.86■■□□□ 1.41
ACTG1P17-202ENST00000560958 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
ACTG1P17-202ENST00000560958 FBLN2P98095 1184 aa23.84■■□□□ 1.41
ACTG1P17-202ENST00000560958 CHMP7Q8WUX9 453 aaPredicted RBP23.83■■□□□ 1.4
ACTG1P17-202ENST00000560958 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
ACTG1P17-202ENST00000560958 CARMIL1Q5VZK9 1371 aa23.79■■□□□ 1.4
ACTG1P17-202ENST00000560958 SYNJ2O15056 1496 aa23.78■■□□□ 1.4
ACTG1P17-202ENST00000560958 CUL7Q14999 1698 aa23.76■■□□□ 1.39
ACTG1P17-202ENST00000560958 ADAMTS12P58397 1594 aa23.75■■□□□ 1.39
ACTG1P17-202ENST00000560958 OSCARQ8IYS5 282 aa23.7■■□□□ 1.38
ACTG1P17-202ENST00000560958 CHD1O14646 1710 aa23.69■■□□□ 1.38
ACTG1P17-202ENST00000560958 PRXQ9BXM0 1461 aa23.67■■□□□ 1.38
ACTG1P17-202ENST00000560958 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
ACTG1P17-202ENST00000560958 RAPGEF2Q9Y4G8 1499 aa23.67■■□□□ 1.38
ACTG1P17-202ENST00000560958 EHMT2Q96KQ7 1210 aa23.54■■□□□ 1.36
ACTG1P17-202ENST00000560958 NUP160Q12769 1436 aa23.54■■□□□ 1.36
ACTG1P17-202ENST00000560958 KIF21BO75037 1637 aa23.54■■□□□ 1.36
ACTG1P17-202ENST00000560958 CEP170Q5SW79 1584 aa23.51■■□□□ 1.35
ACTG1P17-202ENST00000560958 UBTFP17480 764 aaKnown RBP23.48■■□□□ 1.35
ACTG1P17-202ENST00000560958 GOLGA3Q08378 1498 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms