RNA–Protein interactions for RNA: ENST00000560938.1

AC019254.2-201, humanhuman

TSL 2 BASIC

Gene AC019254.2, Length 556 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC019254.2-201ENST00000560938 NISCHQ9Y2I1 1504 aa28.01■■■□□ 2.07
AC019254.2-201ENST00000560938 ABCC9O60706 1549 aa25.22■■□□□ 1.63
AC019254.2-201ENST00000560938 CCDC180Q9P1Z9 1646 aa25.06■■□□□ 1.6
AC019254.2-201ENST00000560938 RB1CC1Q8TDY2 1594 aa23.88■■□□□ 1.41
AC019254.2-201ENST00000560938 DCAF8L2P0C7V8 631 aa23.82■■□□□ 1.4
AC019254.2-201ENST00000560938 NACADO15069 1562 aa23.69■■□□□ 1.38
AC019254.2-201ENST00000560938 DNAJC5BQ9UF47 199 aa23.67■■□□□ 1.38
AC019254.2-201ENST00000560938 PABPN1Q86U42 306 aaKnown RBP eCLIP23.53■■□□□ 1.36
AC019254.2-201ENST00000560938 UNC13AQ9UPW8 1703 aa23.42■■□□□ 1.34
AC019254.2-201ENST00000560938 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
AC019254.2-201ENST00000560938 BICRAQ9NZM4 1560 aa23.23■■□□□ 1.31
AC019254.2-201ENST00000560938 ZCCHC6Q5VYS8 1495 aaKnown RBP23.21■■□□□ 1.31
AC019254.2-201ENST00000560938 DCAF1Q9Y4B6 1507 aa23.03■■□□□ 1.28
AC019254.2-201ENST00000560938 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
AC019254.2-201ENST00000560938 SHROOM4Q9ULL8 1493 aa22.74■■□□□ 1.23
AC019254.2-201ENST00000560938 CC2D2AQ9P2K1 1620 aa22.72■■□□□ 1.23
AC019254.2-201ENST00000560938 EIF4G1Q04637 1599 aaKnown RBP22.65■■□□□ 1.22
AC019254.2-201ENST00000560938 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
AC019254.2-201ENST00000560938 NCAPD3P42695 1498 aa21.89■■□□□ 1.09
AC019254.2-201ENST00000560938 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
AC019254.2-201ENST00000560938 SMARCA4P51532 1647 aa21.86■■□□□ 1.09
AC019254.2-201ENST00000560938 SMARCA2P51531 1590 aa21.76■■□□□ 1.07
AC019254.2-201ENST00000560938 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
AC019254.2-201ENST00000560938 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
AC019254.2-201ENST00000560938 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
AC019254.2-201ENST00000560938 NESP48681 1621 aa21.68■■□□□ 1.06
AC019254.2-201ENST00000560938 BAZ1BQ9UIG0 1483 aaKnown RBP21.67■■□□□ 1.06
AC019254.2-201ENST00000560938 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
AC019254.2-201ENST00000560938 DNAJC5Q9H3Z4 198 aa21.62■■□□□ 1.05
AC019254.2-201ENST00000560938 CUX2O14529 1486 aa21.58■■□□□ 1.04
AC019254.2-201ENST00000560938 PEG3Q9GZU2 1588 aa21.56■■□□□ 1.04
AC019254.2-201ENST00000560938 WIZO95785 1651 aa21.4■■□□□ 1.02
AC019254.2-201ENST00000560938 LAMC3Q9Y6N6 1575 aa21.39■■□□□ 1.01
AC019254.2-201ENST00000560938 THOC2Q8NI27 1593 aaKnown RBP21.36■■□□□ 1.01
AC019254.2-201ENST00000560938 KIF21AQ7Z4S6 1674 aa21.36■■□□□ 1.01
AC019254.2-201ENST00000560938 PDS5BQ9NTI5 1447 aa21.28■■□□□ 1
AC019254.2-201ENST00000560938 CADPSQ9ULU8 1353 aa21.25■□□□□ 0.99
AC019254.2-201ENST00000560938 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
AC019254.2-201ENST00000560938 MRC2Q9UBG0 1479 aa21.13■□□□□ 0.97
AC019254.2-201ENST00000560938 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
AC019254.2-201ENST00000560938 CEP164Q9UPV0 1460 aa21.06■□□□□ 0.96
AC019254.2-201ENST00000560938 FANCD2Q9BXW9 1451 aa21.05■□□□□ 0.96
AC019254.2-201ENST00000560938 WDR62O43379 1518 aa21.04■□□□□ 0.96
AC019254.2-201ENST00000560938 CFTRP13569 1480 aa21.01■□□□□ 0.95
AC019254.2-201ENST00000560938 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
AC019254.2-201ENST00000560938 CCDC88BA6NC98 1476 aa20.87■□□□□ 0.93
AC019254.2-201ENST00000560938 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
AC019254.2-201ENST00000560938 PRDM2Q13029 1718 aa20.79■□□□□ 0.92
AC019254.2-201ENST00000560938 OSCARQ8IYS5 282 aa20.67■□□□□ 0.9
AC019254.2-201ENST00000560938 ZNF608Q9ULD9 1512 aaPredicted RBP20.67■□□□□ 0.9
AC019254.2-201ENST00000560938 TOPBP1Q92547 1522 aa20.65■□□□□ 0.9
AC019254.2-201ENST00000560938 IFT140Q96RY7 1462 aa20.6■□□□□ 0.89
AC019254.2-201ENST00000560938 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
AC019254.2-201ENST00000560938 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
AC019254.2-201ENST00000560938 EIF4G3O43432 1585 aaKnown RBP20.51■□□□□ 0.87
AC019254.2-201ENST00000560938 AQRO60306 1485 aaKnown RBP eCLIP20.48■□□□□ 0.87
AC019254.2-201ENST00000560938 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
AC019254.2-201ENST00000560938 POLA1P09884 1462 aaPredicted RBP20.43■□□□□ 0.86
AC019254.2-201ENST00000560938 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
AC019254.2-201ENST00000560938 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
AC019254.2-201ENST00000560938 RIMBP3BA6NNM3 1639 aa20.42■□□□□ 0.86
AC019254.2-201ENST00000560938 RIMBP3Q9UFD9 1639 aa20.42■□□□□ 0.86
AC019254.2-201ENST00000560938 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
AC019254.2-201ENST00000560938 FBLN2P98095 1184 aa20.39■□□□□ 0.85
AC019254.2-201ENST00000560938 CHD1O14646 1710 aa20.38■□□□□ 0.85
AC019254.2-201ENST00000560938 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
AC019254.2-201ENST00000560938 SOGA1O94964 1423 aa20.36■□□□□ 0.85
AC019254.2-201ENST00000560938 ARHGEF11O15085 1522 aa20.34■□□□□ 0.85
AC019254.2-201ENST00000560938 FGD5Q6ZNL6 1462 aa20.34■□□□□ 0.85
AC019254.2-201ENST00000560938 CUX1P39880 1505 aa20.32■□□□□ 0.84
AC019254.2-201ENST00000560938 CYB5RLQ6IPT4 315 aa20.27■□□□□ 0.84
AC019254.2-201ENST00000560938 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
AC019254.2-201ENST00000560938 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
AC019254.2-201ENST00000560938 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
AC019254.2-201ENST00000560938 WDR97A6NE52 1622 aa20.14■□□□□ 0.81
AC019254.2-201ENST00000560938 GRIN2BQ13224 1484 aa20.14■□□□□ 0.81
AC019254.2-201ENST00000560938 MAGI1Q96QZ7 1491 aaPredicted RBP20.11■□□□□ 0.81
AC019254.2-201ENST00000560938 PBRM1Q86U86 1689 aa20.1■□□□□ 0.81
AC019254.2-201ENST00000560938 GAPVD1Q14C86 1478 aa20.1■□□□□ 0.81
AC019254.2-201ENST00000560938 CLASP1Q7Z460 1538 aa20.08■□□□□ 0.81
AC019254.2-201ENST00000560938 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
AC019254.2-201ENST00000560938 SYNJ2O15056 1496 aa20.06■□□□□ 0.8
AC019254.2-201ENST00000560938 TRHP20396 242 aaPredicted RBP20.05■□□□□ 0.8
AC019254.2-201ENST00000560938 ABCA10Q8WWZ4 1543 aa20.05■□□□□ 0.8
AC019254.2-201ENST00000560938 ABCA5Q8WWZ7 1642 aa20.03■□□□□ 0.8
AC019254.2-201ENST00000560938 WRNQ14191 1432 aaPredicted RBP eCLIP19.98■□□□□ 0.79
AC019254.2-201ENST00000560938 BIVM-ERCC5R4GMW8 1640 aa19.95■□□□□ 0.78
AC019254.2-201ENST00000560938 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
AC019254.2-201ENST00000560938 GRIN2AQ12879 1464 aa19.9■□□□□ 0.78
AC019254.2-201ENST00000560938 ADAMTS12P58397 1594 aa19.9■□□□□ 0.78
AC019254.2-201ENST00000560938 ERCC6L2Q5T890 1561 aa19.88■□□□□ 0.77
AC019254.2-201ENST00000560938 CEP170Q5SW79 1584 aa19.86■□□□□ 0.77
AC019254.2-201ENST00000560938 FHAD1B1AJZ9 1412 aa19.82■□□□□ 0.76
AC019254.2-201ENST00000560938 NUP160Q12769 1436 aa19.8■□□□□ 0.76
AC019254.2-201ENST00000560938 ERICH3Q5RHP9 1530 aa19.77■□□□□ 0.76
AC019254.2-201ENST00000560938 SHROOM2Q13796 1616 aa19.71■□□□□ 0.75
AC019254.2-201ENST00000560938 PRG4Q92954 1404 aaPredicted RBP19.67■□□□□ 0.74
AC019254.2-201ENST00000560938 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
AC019254.2-201ENST00000560938 RUSC2Q8N2Y8 1516 aa19.61■□□□□ 0.73
AC019254.2-201ENST00000560938 IGF1RP08069 1367 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 210.2 ms