RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 NISCHQ9Y2I1 1504 aa49.21■■■■■ 5.47
IPO4-215ENST00000560935 CCDC180Q9P1Z9 1646 aa43.97■■■■■ 4.63
IPO4-215ENST00000560935 ABCC9O60706 1549 aa43.32■■■■■ 4.52
IPO4-215ENST00000560935 RB1CC1Q8TDY2 1594 aa41.55■■■■■ 4.24
IPO4-215ENST00000560935 NACADO15069 1562 aa41.4■■■■■ 4.22
IPO4-215ENST00000560935 DCAF8L2P0C7V8 631 aa41.26■■■■■ 4.2
IPO4-215ENST00000560935 MYO15BQ96JP2 1530 aa41.03■■■■■ 4.16
IPO4-215ENST00000560935 ZCCHC6Q5VYS8 1495 aaKnown RBP40.93■■■■■ 4.14
IPO4-215ENST00000560935 DCAF1Q9Y4B6 1507 aa40.72■■■■■ 4.11
IPO4-215ENST00000560935 UNC13AQ9UPW8 1703 aa40.59■■■■■ 4.09
IPO4-215ENST00000560935 PABPN1Q86U42 306 aaKnown RBP eCLIP40.38■■■■■ 4.059e-7■■■□□ 19.1
IPO4-215ENST00000560935 BICRAQ9NZM4 1560 aa40.26■■■■■ 4.04
IPO4-215ENST00000560935 SCRIBQ14160 1630 aa40.07■■■■■ 4.01
IPO4-215ENST00000560935 DNAJC5BQ9UF47 199 aa40.01■■■■■ 4
IPO4-215ENST00000560935 SHROOM4Q9ULL8 1493 aa39.86■■■■□ 3.97
IPO4-215ENST00000560935 EIF4G1Q04637 1599 aaKnown RBP39.25■■■■□ 3.87
IPO4-215ENST00000560935 CC2D2AQ9P2K1 1620 aa39.18■■■■□ 3.86
IPO4-215ENST00000560935 CECR2Q9BXF3 1484 aa38.97■■■■□ 3.83
IPO4-215ENST00000560935 SMARCA4P51532 1647 aa38.29■■■■□ 3.72
IPO4-215ENST00000560935 BAZ1AQ9NRL2 1556 aaPredicted RBP38.19■■■■□ 3.7
IPO4-215ENST00000560935 NCAPD3P42695 1498 aa38.17■■■■□ 3.7
IPO4-215ENST00000560935 ATAD2BQ9ULI0 1458 aa38.15■■■■□ 3.7
IPO4-215ENST00000560935 SMARCA2P51531 1590 aa38.12■■■■□ 3.69
IPO4-215ENST00000560935 HMGXB3Q12766 1538 aa37.99■■■■□ 3.67
IPO4-215ENST00000560935 MROH2BQ7Z745 1585 aa37.91■■■■□ 3.66
IPO4-215ENST00000560935 PEG3Q9GZU2 1588 aa37.91■■■■□ 3.66
IPO4-215ENST00000560935 BAZ1BQ9UIG0 1483 aaKnown RBP37.84■■■■□ 3.65
IPO4-215ENST00000560935 WIZO95785 1651 aa37.5■■■■□ 3.59
IPO4-215ENST00000560935 ERCC6Q03468 1493 aa37.4■■■■□ 3.58
IPO4-215ENST00000560935 NESP48681 1621 aa37.36■■■■□ 3.57
IPO4-215ENST00000560935 RSF1Q96T23 1441 aaPredicted RBP37.34■■■■□ 3.57
IPO4-215ENST00000560935 LAMC3Q9Y6N6 1575 aa37.26■■■■□ 3.56
IPO4-215ENST00000560935 CUX2O14529 1486 aa37.13■■■■□ 3.53
IPO4-215ENST00000560935 TOP2AP11388 1531 aaKnown RBP37.1■■■■□ 3.53
IPO4-215ENST00000560935 CADPSQ9ULU8 1353 aa37.04■■■■□ 3.52
IPO4-215ENST00000560935 PDS5BQ9NTI5 1447 aa37.02■■■■□ 3.52
IPO4-215ENST00000560935 KIF21AQ7Z4S6 1674 aa36.96■■■■□ 3.51
IPO4-215ENST00000560935 THOC2Q8NI27 1593 aaKnown RBP36.91■■■■□ 3.5
IPO4-215ENST00000560935 CFTRP13569 1480 aa36.75■■■■□ 3.47
IPO4-215ENST00000560935 MRC2Q9UBG0 1479 aa36.66■■■■□ 3.46
IPO4-215ENST00000560935 CEP164Q9UPV0 1460 aa36.65■■■■□ 3.46
IPO4-215ENST00000560935 FANCD2Q9BXW9 1451 aa36.63■■■■□ 3.45
IPO4-215ENST00000560935 CCDC88BA6NC98 1476 aa36.62■■■■□ 3.45
IPO4-215ENST00000560935 WDR62O43379 1518 aa36.54■■■■□ 3.44
IPO4-215ENST00000560935 PRDM2Q13029 1718 aa36.51■■■■□ 3.44
IPO4-215ENST00000560935 DNAJC5Q9H3Z4 198 aa36.36■■■■□ 3.41
IPO4-215ENST00000560935 URB2Q14146 1524 aaKnown RBP36.28■■■■□ 3.4
IPO4-215ENST00000560935 SUPT5HO00267 1087 aaKnown RBP36.13■■■■□ 3.37
IPO4-215ENST00000560935 TOPBP1Q92547 1522 aa36.01■■■■□ 3.36
IPO4-215ENST00000560935 ABCC8Q09428 1581 aa36.01■■■■□ 3.35
IPO4-215ENST00000560935 DNMBPQ6XZF7 1577 aa35.96■■■■□ 3.35
IPO4-215ENST00000560935 IFT140Q96RY7 1462 aa35.89■■■■□ 3.34
IPO4-215ENST00000560935 ZNF608Q9ULD9 1512 aaPredicted RBP35.73■■■■□ 3.31
IPO4-215ENST00000560935 POLA1P09884 1462 aaPredicted RBP35.67■■■■□ 3.3
IPO4-215ENST00000560935 TARBP1Q13395 1621 aaKnown RBP35.65■■■■□ 3.3
IPO4-215ENST00000560935 EIF4G3O43432 1585 aaKnown RBP35.61■■■■□ 3.29
IPO4-215ENST00000560935 CUX1P39880 1505 aa35.59■■■■□ 3.29
IPO4-215ENST00000560935 FGD5Q6ZNL6 1462 aa35.54■■■■□ 3.28
IPO4-215ENST00000560935 SOGA1O94964 1423 aa35.52■■■■□ 3.28
IPO4-215ENST00000560935 RAD54L2Q9Y4B4 1467 aa35.51■■■■□ 3.28
IPO4-215ENST00000560935 OSCARQ8IYS5 282 aa35.5■■■■□ 3.27
IPO4-215ENST00000560935 AQRO60306 1485 aaKnown RBP eCLIP35.47■■■■□ 3.27
IPO4-215ENST00000560935 WDR97A6NE52 1622 aa35.39■■■■□ 3.26
IPO4-215ENST00000560935 TDRD9Q8NDG6 1382 aaKnown RBP35.35■■■■□ 3.25
IPO4-215ENST00000560935 WRNQ14191 1432 aaPredicted RBP eCLIP35.24■■■■□ 3.23
IPO4-215ENST00000560935 CHD1O14646 1710 aa35.24■■■■□ 3.23
IPO4-215ENST00000560935 BIVM-ERCC5R4GMW8 1640 aa35.23■■■■□ 3.23
IPO4-215ENST00000560935 TOP2BQ02880 1626 aa35.21■■■■□ 3.23
IPO4-215ENST00000560935 ABCA10Q8WWZ4 1543 aa35.18■■■■□ 3.22
IPO4-215ENST00000560935 SYNJ1O43426 1573 aa35.17■■■■□ 3.22
IPO4-215ENST00000560935 GRIN2BQ13224 1484 aa35.16■■■■□ 3.22
IPO4-215ENST00000560935 SNAPC4Q5SXM2 1469 aa35.16■■■■□ 3.22
IPO4-215ENST00000560935 FBLN2P98095 1184 aa35.14■■■■□ 3.22
IPO4-215ENST00000560935 MAGI1Q96QZ7 1491 aaPredicted RBP35.12■■■■□ 3.21
IPO4-215ENST00000560935 GAPVD1Q14C86 1478 aa35.11■■■■□ 3.21
IPO4-215ENST00000560935 PBRM1Q86U86 1689 aa35.11■■■■□ 3.21
IPO4-215ENST00000560935 ABCA5Q8WWZ7 1642 aa35.09■■■■□ 3.21
IPO4-215ENST00000560935 TRIM41Q8WV44 630 aa35.04■■■■□ 3.2
IPO4-215ENST00000560935 RIMBP3CA6NJZ7 1639 aa34.99■■■■□ 3.19
IPO4-215ENST00000560935 RIMBP3BA6NNM3 1639 aa34.99■■■■□ 3.19
IPO4-215ENST00000560935 RIMBP3Q9UFD9 1639 aa34.99■■■■□ 3.19
IPO4-215ENST00000560935 CHMP7Q8WUX9 453 aaPredicted RBP34.99■■■■□ 3.19
IPO4-215ENST00000560935 SYNJ2O15056 1496 aa34.98■■■■□ 3.19
IPO4-215ENST00000560935 ARHGEF11O15085 1522 aa34.94■■■■□ 3.18
IPO4-215ENST00000560935 CLASP1Q7Z460 1538 aa34.82■■■■□ 3.16
IPO4-215ENST00000560935 ADAMTS12P58397 1594 aa34.79■■■■□ 3.16
IPO4-215ENST00000560935 ERICH3Q5RHP9 1530 aa34.77■■■■□ 3.16
IPO4-215ENST00000560935 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
IPO4-215ENST00000560935 FHAD1B1AJZ9 1412 aa34.7■■■■□ 3.15
IPO4-215ENST00000560935 ARAP1Q96P48 1450 aa34.63■■■■□ 3.13
IPO4-215ENST00000560935 CYB5RLQ6IPT4 315 aa34.61■■■■□ 3.13
IPO4-215ENST00000560935 NUP160Q12769 1436 aa34.55■■■■□ 3.12
IPO4-215ENST00000560935 KIF27Q86VH2 1401 aa34.55■■■■□ 3.12
IPO4-215ENST00000560935 CEP170Q5SW79 1584 aa34.54■■■■□ 3.12
IPO4-215ENST00000560935 CUL7Q14999 1698 aa34.41■■■■□ 3.1
IPO4-215ENST00000560935 IGF1RP08069 1367 aa34.4■■■■□ 3.1
IPO4-215ENST00000560935 SHROOM2Q13796 1616 aa34.36■■■■□ 3.09
IPO4-215ENST00000560935 ERCC6L2Q5T890 1561 aa34.29■■■■□ 3.08
IPO4-215ENST00000560935 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
IPO4-215ENST00000560935 CARMIL1Q5VZK9 1371 aa34.23■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms