RNA–Protein interactions for RNA: ENST00000560906.1

AC013553.1-201, humanhuman

BASIC

Gene AC013553.1, Length 267 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013553.1-201ENST00000560906 NISCHQ9Y2I1 1504 aa33.53■■■□□ 2.96
AC013553.1-201ENST00000560906 CCDC180Q9P1Z9 1646 aa29.94■■■□□ 2.38
AC013553.1-201ENST00000560906 ABCC9O60706 1549 aa29.44■■■□□ 2.3
AC013553.1-201ENST00000560906 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
AC013553.1-201ENST00000560906 NACADO15069 1562 aa28.16■■■□□ 2.1
AC013553.1-201ENST00000560906 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
AC013553.1-201ENST00000560906 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
AC013553.1-201ENST00000560906 ZCCHC6Q5VYS8 1495 aaKnown RBP27.91■■■□□ 2.06
AC013553.1-201ENST00000560906 DCAF1Q9Y4B6 1507 aa27.73■■■□□ 2.03
AC013553.1-201ENST00000560906 UNC13AQ9UPW8 1703 aa27.69■■■□□ 2.02
AC013553.1-201ENST00000560906 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.98
AC013553.1-201ENST00000560906 BICRAQ9NZM4 1560 aa27.42■■□□□ 1.98
AC013553.1-201ENST00000560906 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
AC013553.1-201ENST00000560906 DNAJC5BQ9UF47 199 aa27.16■■□□□ 1.94
AC013553.1-201ENST00000560906 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
AC013553.1-201ENST00000560906 EIF4G1Q04637 1599 aaKnown RBP26.7■■□□□ 1.86
AC013553.1-201ENST00000560906 CC2D2AQ9P2K1 1620 aa26.64■■□□□ 1.85
AC013553.1-201ENST00000560906 CECR2Q9BXF3 1484 aa26.46■■□□□ 1.83
AC013553.1-201ENST00000560906 SMARCA4P51532 1647 aa26.09■■□□□ 1.77
AC013553.1-201ENST00000560906 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
AC013553.1-201ENST00000560906 NCAPD3P42695 1498 aa25.96■■□□□ 1.75
AC013553.1-201ENST00000560906 ATAD2BQ9ULI0 1458 aa25.96■■□□□ 1.75
AC013553.1-201ENST00000560906 SMARCA2P51531 1590 aa25.93■■□□□ 1.74
AC013553.1-201ENST00000560906 HMGXB3Q12766 1538 aa25.85■■□□□ 1.73
AC013553.1-201ENST00000560906 MROH2BQ7Z745 1585 aa25.85■■□□□ 1.73
AC013553.1-201ENST00000560906 PEG3Q9GZU2 1588 aa25.82■■□□□ 1.72
AC013553.1-201ENST00000560906 BAZ1BQ9UIG0 1483 aaKnown RBP25.74■■□□□ 1.71
AC013553.1-201ENST00000560906 WIZO95785 1651 aa25.59■■□□□ 1.69
AC013553.1-201ENST00000560906 RSF1Q96T23 1441 aaPredicted RBP25.46■■□□□ 1.67
AC013553.1-201ENST00000560906 NESP48681 1621 aa25.43■■□□□ 1.66
AC013553.1-201ENST00000560906 ERCC6Q03468 1493 aa25.38■■□□□ 1.65
AC013553.1-201ENST00000560906 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
AC013553.1-201ENST00000560906 TOP2AP11388 1531 aaKnown RBP25.28■■□□□ 1.64
AC013553.1-201ENST00000560906 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
AC013553.1-201ENST00000560906 KIF21AQ7Z4S6 1674 aa25.18■■□□□ 1.62
AC013553.1-201ENST00000560906 CUX2O14529 1486 aa25.18■■□□□ 1.62
AC013553.1-201ENST00000560906 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
AC013553.1-201ENST00000560906 THOC2Q8NI27 1593 aaKnown RBP25.12■■□□□ 1.61
AC013553.1-201ENST00000560906 CFTRP13569 1480 aa25.02■■□□□ 1.6
AC013553.1-201ENST00000560906 CCDC88BA6NC98 1476 aa24.96■■□□□ 1.59
AC013553.1-201ENST00000560906 FANCD2Q9BXW9 1451 aa24.92■■□□□ 1.58
AC013553.1-201ENST00000560906 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
AC013553.1-201ENST00000560906 CEP164Q9UPV0 1460 aa24.91■■□□□ 1.58
AC013553.1-201ENST00000560906 PRDM2Q13029 1718 aa24.91■■□□□ 1.58
AC013553.1-201ENST00000560906 WDR62O43379 1518 aa24.86■■□□□ 1.57
AC013553.1-201ENST00000560906 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
AC013553.1-201ENST00000560906 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
AC013553.1-201ENST00000560906 DNAJC5Q9H3Z4 198 aa24.59■■□□□ 1.53
AC013553.1-201ENST00000560906 TOPBP1Q92547 1522 aa24.51■■□□□ 1.51
AC013553.1-201ENST00000560906 DNMBPQ6XZF7 1577 aa24.48■■□□□ 1.51
AC013553.1-201ENST00000560906 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
AC013553.1-201ENST00000560906 IFT140Q96RY7 1462 aa24.39■■□□□ 1.5
AC013553.1-201ENST00000560906 ZNF608Q9ULD9 1512 aaPredicted RBP24.31■■□□□ 1.48
AC013553.1-201ENST00000560906 POLA1P09884 1462 aaPredicted RBP24.29■■□□□ 1.48
AC013553.1-201ENST00000560906 TARBP1Q13395 1621 aaKnown RBP24.28■■□□□ 1.48
AC013553.1-201ENST00000560906 CUX1P39880 1505 aa24.26■■□□□ 1.47
AC013553.1-201ENST00000560906 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
AC013553.1-201ENST00000560906 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
AC013553.1-201ENST00000560906 RAD54L2Q9Y4B4 1467 aa24.19■■□□□ 1.46
AC013553.1-201ENST00000560906 SOGA1O94964 1423 aa24.15■■□□□ 1.46
AC013553.1-201ENST00000560906 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.45
AC013553.1-201ENST00000560906 WDR97A6NE52 1622 aa24.07■■□□□ 1.44
AC013553.1-201ENST00000560906 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
AC013553.1-201ENST00000560906 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
AC013553.1-201ENST00000560906 BIVM-ERCC5R4GMW8 1640 aa24.03■■□□□ 1.44
AC013553.1-201ENST00000560906 WRNQ14191 1432 aaPredicted RBP eCLIP24.01■■□□□ 1.43
AC013553.1-201ENST00000560906 SYNJ1O43426 1573 aa24.01■■□□□ 1.43
AC013553.1-201ENST00000560906 TOP2BQ02880 1626 aa24.01■■□□□ 1.43
AC013553.1-201ENST00000560906 CHD1O14646 1710 aa24■■□□□ 1.43
AC013553.1-201ENST00000560906 ABCA10Q8WWZ4 1543 aa23.95■■□□□ 1.43
AC013553.1-201ENST00000560906 SNAPC4Q5SXM2 1469 aa23.93■■□□□ 1.42
AC013553.1-201ENST00000560906 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
AC013553.1-201ENST00000560906 GRIN2BQ13224 1484 aa23.91■■□□□ 1.42
AC013553.1-201ENST00000560906 ABCA5Q8WWZ7 1642 aa23.91■■□□□ 1.42
AC013553.1-201ENST00000560906 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.42
AC013553.1-201ENST00000560906 MAGI1Q96QZ7 1491 aaPredicted RBP23.88■■□□□ 1.41
AC013553.1-201ENST00000560906 FBLN2P98095 1184 aa23.85■■□□□ 1.41
AC013553.1-201ENST00000560906 SYNJ2O15056 1496 aa23.79■■□□□ 1.4
AC013553.1-201ENST00000560906 RIMBP3CA6NJZ7 1639 aa23.78■■□□□ 1.4
AC013553.1-201ENST00000560906 RIMBP3BA6NNM3 1639 aa23.78■■□□□ 1.4
AC013553.1-201ENST00000560906 RIMBP3Q9UFD9 1639 aa23.78■■□□□ 1.4
AC013553.1-201ENST00000560906 CHMP7Q8WUX9 453 aaPredicted RBP23.76■■□□□ 1.39
AC013553.1-201ENST00000560906 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
AC013553.1-201ENST00000560906 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
AC013553.1-201ENST00000560906 ADAMTS12P58397 1594 aa23.69■■□□□ 1.38
AC013553.1-201ENST00000560906 CLASP1Q7Z460 1538 aa23.69■■□□□ 1.38
AC013553.1-201ENST00000560906 ERICH3Q5RHP9 1530 aa23.67■■□□□ 1.38
AC013553.1-201ENST00000560906 GRIN2AQ12879 1464 aa23.62■■□□□ 1.37
AC013553.1-201ENST00000560906 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
AC013553.1-201ENST00000560906 ARAP1Q96P48 1450 aa23.54■■□□□ 1.36
AC013553.1-201ENST00000560906 CEP170Q5SW79 1584 aa23.53■■□□□ 1.36
AC013553.1-201ENST00000560906 NUP160Q12769 1436 aa23.52■■□□□ 1.36
AC013553.1-201ENST00000560906 KIF27Q86VH2 1401 aa23.52■■□□□ 1.36
AC013553.1-201ENST00000560906 CYB5RLQ6IPT4 315 aa23.47■■□□□ 1.35
AC013553.1-201ENST00000560906 CUL7Q14999 1698 aa23.44■■□□□ 1.34
AC013553.1-201ENST00000560906 IGF1RP08069 1367 aa23.43■■□□□ 1.34
AC013553.1-201ENST00000560906 SHROOM2Q13796 1616 aa23.39■■□□□ 1.33
AC013553.1-201ENST00000560906 RUSC2Q8N2Y8 1516 aa23.36■■□□□ 1.33
AC013553.1-201ENST00000560906 ERCC6L2Q5T890 1561 aa23.35■■□□□ 1.33
AC013553.1-201ENST00000560906 CARMIL1Q5VZK9 1371 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms