RNA–Protein interactions for RNA: ENST00000560812.5

AC012236.1-201, humanhuman

TSL 3 BASIC

Gene AC012236.1, Length 680 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012236.1-201ENST00000560812 NISCHQ9Y2I1 1504 aa27.42■■□□□ 1.98
AC012236.1-201ENST00000560812 CCDC180Q9P1Z9 1646 aa24.5■■□□□ 1.51
AC012236.1-201ENST00000560812 ABCC9O60706 1549 aa24.08■■□□□ 1.45
AC012236.1-201ENST00000560812 RB1CC1Q8TDY2 1594 aa23.1■■□□□ 1.29
AC012236.1-201ENST00000560812 NACADO15069 1562 aa23.05■■□□□ 1.28
AC012236.1-201ENST00000560812 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
AC012236.1-201ENST00000560812 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
AC012236.1-201ENST00000560812 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
AC012236.1-201ENST00000560812 DCAF1Q9Y4B6 1507 aa22.71■■□□□ 1.23
AC012236.1-201ENST00000560812 UNC13AQ9UPW8 1703 aa22.65■■□□□ 1.22
AC012236.1-201ENST00000560812 BICRAQ9NZM4 1560 aa22.46■■□□□ 1.19
AC012236.1-201ENST00000560812 PABPN1Q86U42 306 aaKnown RBP eCLIP22.43■■□□□ 1.18
AC012236.1-201ENST00000560812 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
AC012236.1-201ENST00000560812 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
AC012236.1-201ENST00000560812 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
AC012236.1-201ENST00000560812 EIF4G1Q04637 1599 aaKnown RBP21.86■■□□□ 1.09
AC012236.1-201ENST00000560812 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
AC012236.1-201ENST00000560812 CECR2Q9BXF3 1484 aa21.66■■□□□ 1.06
AC012236.1-201ENST00000560812 SMARCA4P51532 1647 aa21.33■■□□□ 1.01
AC012236.1-201ENST00000560812 NCAPD3P42695 1498 aa21.26■□□□□ 0.99
AC012236.1-201ENST00000560812 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
AC012236.1-201ENST00000560812 ATAD2BQ9ULI0 1458 aa21.25■□□□□ 0.99
AC012236.1-201ENST00000560812 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
AC012236.1-201ENST00000560812 HMGXB3Q12766 1538 aa21.16■□□□□ 0.98
AC012236.1-201ENST00000560812 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
AC012236.1-201ENST00000560812 MROH2BQ7Z745 1585 aa21.14■□□□□ 0.97
AC012236.1-201ENST00000560812 BAZ1BQ9UIG0 1483 aaKnown RBP21.04■□□□□ 0.96
AC012236.1-201ENST00000560812 WIZO95785 1651 aa20.89■□□□□ 0.94
AC012236.1-201ENST00000560812 RSF1Q96T23 1441 aaPredicted RBP20.81■□□□□ 0.92
AC012236.1-201ENST00000560812 NESP48681 1621 aa20.8■□□□□ 0.92
AC012236.1-201ENST00000560812 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
AC012236.1-201ENST00000560812 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
AC012236.1-201ENST00000560812 TOP2AP11388 1531 aaKnown RBP20.67■□□□□ 0.9
AC012236.1-201ENST00000560812 CUX2O14529 1486 aa20.63■□□□□ 0.89
AC012236.1-201ENST00000560812 CADPSQ9ULU8 1353 aa20.6■□□□□ 0.89
AC012236.1-201ENST00000560812 KIF21AQ7Z4S6 1674 aa20.58■□□□□ 0.89
AC012236.1-201ENST00000560812 THOC2Q8NI27 1593 aaKnown RBP20.57■□□□□ 0.88
AC012236.1-201ENST00000560812 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
AC012236.1-201ENST00000560812 CFTRP13569 1480 aa20.48■□□□□ 0.87
AC012236.1-201ENST00000560812 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
AC012236.1-201ENST00000560812 MRC2Q9UBG0 1479 aa20.39■□□□□ 0.85
AC012236.1-201ENST00000560812 FANCD2Q9BXW9 1451 aa20.38■□□□□ 0.85
AC012236.1-201ENST00000560812 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
AC012236.1-201ENST00000560812 PRDM2Q13029 1718 aa20.36■□□□□ 0.85
AC012236.1-201ENST00000560812 WDR62O43379 1518 aa20.36■□□□□ 0.85
AC012236.1-201ENST00000560812 URB2Q14146 1524 aaKnown RBP20.22■□□□□ 0.83
AC012236.1-201ENST00000560812 DNAJC5Q9H3Z4 198 aa20.18■□□□□ 0.82
AC012236.1-201ENST00000560812 SUPT5HO00267 1087 aaKnown RBP20.05■□□□□ 0.8
AC012236.1-201ENST00000560812 TOPBP1Q92547 1522 aa20.05■□□□□ 0.8
AC012236.1-201ENST00000560812 DNMBPQ6XZF7 1577 aa20.02■□□□□ 0.8
AC012236.1-201ENST00000560812 ABCC8Q09428 1581 aa20.01■□□□□ 0.79
AC012236.1-201ENST00000560812 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
AC012236.1-201ENST00000560812 ZNF608Q9ULD9 1512 aaPredicted RBP19.9■□□□□ 0.78
AC012236.1-201ENST00000560812 TARBP1Q13395 1621 aaKnown RBP19.87■□□□□ 0.77
AC012236.1-201ENST00000560812 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
AC012236.1-201ENST00000560812 CUX1P39880 1505 aa19.84■□□□□ 0.77
AC012236.1-201ENST00000560812 EIF4G3O43432 1585 aaKnown RBP19.83■□□□□ 0.76
AC012236.1-201ENST00000560812 FGD5Q6ZNL6 1462 aa19.79■□□□□ 0.76
AC012236.1-201ENST00000560812 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
AC012236.1-201ENST00000560812 SOGA1O94964 1423 aa19.74■□□□□ 0.75
AC012236.1-201ENST00000560812 AQRO60306 1485 aaKnown RBP eCLIP19.73■□□□□ 0.75
AC012236.1-201ENST00000560812 WDR97A6NE52 1622 aa19.7■□□□□ 0.74
AC012236.1-201ENST00000560812 OSCARQ8IYS5 282 aa19.68■□□□□ 0.74
AC012236.1-201ENST00000560812 TDRD9Q8NDG6 1382 aaKnown RBP19.65■□□□□ 0.74
AC012236.1-201ENST00000560812 BIVM-ERCC5R4GMW8 1640 aa19.64■□□□□ 0.73
AC012236.1-201ENST00000560812 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
AC012236.1-201ENST00000560812 CHD1O14646 1710 aa19.62■□□□□ 0.73
AC012236.1-201ENST00000560812 SYNJ1O43426 1573 aa19.61■□□□□ 0.73
AC012236.1-201ENST00000560812 WRNQ14191 1432 aaPredicted RBP eCLIP19.61■□□□□ 0.73
AC012236.1-201ENST00000560812 ABCA10Q8WWZ4 1543 aa19.6■□□□□ 0.73
AC012236.1-201ENST00000560812 SNAPC4Q5SXM2 1469 aa19.56■□□□□ 0.72
AC012236.1-201ENST00000560812 ABCA5Q8WWZ7 1642 aa19.56■□□□□ 0.72
AC012236.1-201ENST00000560812 GRIN2BQ13224 1484 aa19.55■□□□□ 0.72
AC012236.1-201ENST00000560812 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
AC012236.1-201ENST00000560812 MAGI1Q96QZ7 1491 aaPredicted RBP19.54■□□□□ 0.72
AC012236.1-201ENST00000560812 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
AC012236.1-201ENST00000560812 RIMBP3CA6NJZ7 1639 aa19.47■□□□□ 0.71
AC012236.1-201ENST00000560812 RIMBP3BA6NNM3 1639 aa19.47■□□□□ 0.71
AC012236.1-201ENST00000560812 RIMBP3Q9UFD9 1639 aa19.47■□□□□ 0.71
AC012236.1-201ENST00000560812 SYNJ2O15056 1496 aa19.46■□□□□ 0.71
AC012236.1-201ENST00000560812 FBLN2P98095 1184 aa19.45■□□□□ 0.7
AC012236.1-201ENST00000560812 ARHGEF11O15085 1522 aa19.43■□□□□ 0.7
AC012236.1-201ENST00000560812 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
AC012236.1-201ENST00000560812 CHMP7Q8WUX9 453 aaPredicted RBP19.4■□□□□ 0.7
AC012236.1-201ENST00000560812 ADAMTS12P58397 1594 aa19.38■□□□□ 0.69
AC012236.1-201ENST00000560812 TRIM41Q8WV44 630 aa19.38■□□□□ 0.69
AC012236.1-201ENST00000560812 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
AC012236.1-201ENST00000560812 GRIN2AQ12879 1464 aa19.32■□□□□ 0.68
AC012236.1-201ENST00000560812 FHAD1B1AJZ9 1412 aa19.3■□□□□ 0.68
AC012236.1-201ENST00000560812 ARAP1Q96P48 1450 aa19.28■□□□□ 0.68
AC012236.1-201ENST00000560812 NUP160Q12769 1436 aa19.25■□□□□ 0.67
AC012236.1-201ENST00000560812 CEP170Q5SW79 1584 aa19.25■□□□□ 0.67
AC012236.1-201ENST00000560812 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
AC012236.1-201ENST00000560812 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
AC012236.1-201ENST00000560812 IGF1RP08069 1367 aa19.16■□□□□ 0.66
AC012236.1-201ENST00000560812 SHROOM2Q13796 1616 aa19.15■□□□□ 0.66
AC012236.1-201ENST00000560812 CUL7Q14999 1698 aa19.15■□□□□ 0.66
AC012236.1-201ENST00000560812 ERCC6L2Q5T890 1561 aa19.11■□□□□ 0.65
AC012236.1-201ENST00000560812 RUSC2Q8N2Y8 1516 aa19.1■□□□□ 0.65
AC012236.1-201ENST00000560812 CARMIL1Q5VZK9 1371 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 326.3 ms