RNA–Protein interactions for RNA: ENST00000560682.5

SLTM-224, Transcript of SAFB like transcription modulator, humanhuman

TSL 3

Gene SLTM, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-224ENST00000560682 NISCHQ9Y2I1 1504 aa12.64□□□□□ -0.39
SLTM-224ENST00000560682 CCDC180Q9P1Z9 1646 aa11.5□□□□□ -0.57
SLTM-224ENST00000560682 ABCC9O60706 1549 aa11.44□□□□□ -0.58
SLTM-224ENST00000560682 RB1CC1Q8TDY2 1594 aa10.93□□□□□ -0.66
SLTM-224ENST00000560682 NACADO15069 1562 aa10.82□□□□□ -0.68
SLTM-224ENST00000560682 UNC13AQ9UPW8 1703 aa10.76□□□□□ -0.69
SLTM-224ENST00000560682 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
SLTM-224ENST00000560682 MYO15BQ96JP2 1530 aa10.66□□□□□ -0.7
SLTM-224ENST00000560682 BICRAQ9NZM4 1560 aa10.59□□□□□ -0.71
SLTM-224ENST00000560682 DCAF8L2P0C7V8 631 aa10.58□□□□□ -0.72
SLTM-224ENST00000560682 PABPN1Q86U42 306 aaKnown RBP eCLIP10.55□□□□□ -0.72
SLTM-224ENST00000560682 SHROOM4Q9ULL8 1493 aa10.5□□□□□ -0.73
SLTM-224ENST00000560682 DCAF1Q9Y4B6 1507 aa10.48□□□□□ -0.73
SLTM-224ENST00000560682 ZCCHC6Q5VYS8 1495 aaKnown RBP10.48□□□□□ -0.73
SLTM-224ENST00000560682 SCRIBQ14160 1630 aa10.39□□□□□ -0.75
SLTM-224ENST00000560682 CC2D2AQ9P2K1 1620 aa10.39□□□□□ -0.75
SLTM-224ENST00000560682 EIF4G1Q04637 1599 aaKnown RBP10.35□□□□□ -0.75
SLTM-224ENST00000560682 CECR2Q9BXF3 1484 aa10.33□□□□□ -0.76
SLTM-224ENST00000560682 CUX2O14529 1486 aa9.96□□□□□ -0.82
SLTM-224ENST00000560682 DNAJC5Q9H3Z4 198 aa9.95□□□□□ -0.82
SLTM-224ENST00000560682 NCAPD3P42695 1498 aa9.94□□□□□ -0.82
SLTM-224ENST00000560682 HMGXB3Q12766 1538 aa9.93□□□□□ -0.82
SLTM-224ENST00000560682 SMARCA4P51532 1647 aa9.93□□□□□ -0.82
SLTM-224ENST00000560682 SMARCA2P51531 1590 aa9.92□□□□□ -0.82
SLTM-224ENST00000560682 ERCC6Q03468 1493 aa9.91□□□□□ -0.82
SLTM-224ENST00000560682 ATAD2BQ9ULI0 1458 aa9.9□□□□□ -0.83
SLTM-224ENST00000560682 BAZ1AQ9NRL2 1556 aaPredicted RBP9.85□□□□□ -0.83
SLTM-224ENST00000560682 PEG3Q9GZU2 1588 aa9.84□□□□□ -0.83
SLTM-224ENST00000560682 BAZ1BQ9UIG0 1483 aaKnown RBP9.82□□□□□ -0.84
SLTM-224ENST00000560682 THOC2Q8NI27 1593 aaKnown RBP9.81□□□□□ -0.84
SLTM-224ENST00000560682 LAMC3Q9Y6N6 1575 aa9.8□□□□□ -0.84
SLTM-224ENST00000560682 NESP48681 1621 aa9.79□□□□□ -0.84
SLTM-224ENST00000560682 KIF21AQ7Z4S6 1674 aa9.77□□□□□ -0.84
SLTM-224ENST00000560682 MROH2BQ7Z745 1585 aa9.71□□□□□ -0.85
SLTM-224ENST00000560682 AEBP2Q6ZN18 517 aaPredicted RBP9.71□□□□□ -0.86
SLTM-224ENST00000560682 PDS5BQ9NTI5 1447 aa9.69□□□□□ -0.86
SLTM-224ENST00000560682 WIZO95785 1651 aa9.64□□□□□ -0.87
SLTM-224ENST00000560682 WDR62O43379 1518 aa9.63□□□□□ -0.87
SLTM-224ENST00000560682 MRC2Q9UBG0 1479 aa9.62□□□□□ -0.87
SLTM-224ENST00000560682 CADPSQ9ULU8 1353 aa9.62□□□□□ -0.87
SLTM-224ENST00000560682 PRDM2Q13029 1718 aa9.59□□□□□ -0.87
SLTM-224ENST00000560682 CEP164Q9UPV0 1460 aa9.58□□□□□ -0.88
SLTM-224ENST00000560682 FANCD2Q9BXW9 1451 aa9.53□□□□□ -0.88
SLTM-224ENST00000560682 TOP2AP11388 1531 aaKnown RBP9.52□□□□□ -0.88
SLTM-224ENST00000560682 CFTRP13569 1480 aa9.51□□□□□ -0.89
SLTM-224ENST00000560682 URB2Q14146 1524 aaKnown RBP9.46□□□□□ -0.89
SLTM-224ENST00000560682 CHIC1Q5VXU3 224 aa9.46□□□□□ -0.9
SLTM-224ENST00000560682 TRIM41Q8WV44 630 aa9.46□□□□□ -0.9
SLTM-224ENST00000560682 RSF1Q96T23 1441 aaPredicted RBP9.46□□□□□ -0.9
SLTM-224ENST00000560682 OSCARQ8IYS5 282 aa9.39□□□□□ -0.91
SLTM-224ENST00000560682 RIMBP3CA6NJZ7 1639 aa9.38□□□□□ -0.91
SLTM-224ENST00000560682 RIMBP3BA6NNM3 1639 aa9.38□□□□□ -0.91
SLTM-224ENST00000560682 RIMBP3Q9UFD9 1639 aa9.38□□□□□ -0.91
SLTM-224ENST00000560682 IFT140Q96RY7 1462 aa9.38□□□□□ -0.91
SLTM-224ENST00000560682 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
SLTM-224ENST00000560682 TOPBP1Q92547 1522 aa9.36□□□□□ -0.91
SLTM-224ENST00000560682 CCDC88BA6NC98 1476 aa9.35□□□□□ -0.91
SLTM-224ENST00000560682 ABCC8Q09428 1581 aa9.35□□□□□ -0.91
SLTM-224ENST00000560682 DNMBPQ6XZF7 1577 aa9.35□□□□□ -0.91
SLTM-224ENST00000560682 CHD1O14646 1710 aa9.34□□□□□ -0.91
SLTM-224ENST00000560682 ZNF608Q9ULD9 1512 aaPredicted RBP9.33□□□□□ -0.92
SLTM-224ENST00000560682 ARHGEF11O15085 1522 aa9.31□□□□□ -0.92
SLTM-224ENST00000560682 TARBP1Q13395 1621 aaKnown RBP9.31□□□□□ -0.92
SLTM-224ENST00000560682 WDR97A6NE52 1622 aa9.27□□□□□ -0.93
SLTM-224ENST00000560682 POLA1P09884 1462 aaPredicted RBP9.24□□□□□ -0.93
SLTM-224ENST00000560682 AQRO60306 1485 aaKnown RBP eCLIP9.21□□□□□ -0.933e-11■■■□□ 15.7
SLTM-224ENST00000560682 ARAP1Q96P48 1450 aa9.21□□□□□ -0.94
SLTM-224ENST00000560682 PBRM1Q86U86 1689 aa9.19□□□□□ -0.94
SLTM-224ENST00000560682 SYNJ1O43426 1573 aa9.18□□□□□ -0.94
SLTM-224ENST00000560682 CLASP1Q7Z460 1538 aa9.18□□□□□ -0.94
SLTM-224ENST00000560682 SNAPC4Q5SXM2 1469 aa9.17□□□□□ -0.94
SLTM-224ENST00000560682 FGD5Q6ZNL6 1462 aa9.17□□□□□ -0.94
SLTM-224ENST00000560682 MAGI1Q96QZ7 1491 aaPredicted RBP9.17□□□□□ -0.94
SLTM-224ENST00000560682 RAD54L2Q9Y4B4 1467 aa9.17□□□□□ -0.94
SLTM-224ENST00000560682 SOGA1O94964 1423 aa9.16□□□□□ -0.94
SLTM-224ENST00000560682 CUX1P39880 1505 aa9.15□□□□□ -0.94
SLTM-224ENST00000560682 CYB5RLQ6IPT4 315 aa9.15□□□□□ -0.94
SLTM-224ENST00000560682 FBLN2P98095 1184 aa9.14□□□□□ -0.95
SLTM-224ENST00000560682 TDRD9Q8NDG6 1382 aaKnown RBP9.13□□□□□ -0.95
SLTM-224ENST00000560682 GRIN2BQ13224 1484 aa9.13□□□□□ -0.95
SLTM-224ENST00000560682 SYNJ2O15056 1496 aa9.12□□□□□ -0.95
SLTM-224ENST00000560682 ABCA5Q8WWZ7 1642 aa9.12□□□□□ -0.95
SLTM-224ENST00000560682 TRHP20396 242 aaPredicted RBP9.09□□□□□ -0.95
SLTM-224ENST00000560682 GAPVD1Q14C86 1478 aa9.08□□□□□ -0.96
SLTM-224ENST00000560682 CHMP7Q8WUX9 453 aaPredicted RBP9.08□□□□□ -0.96
SLTM-224ENST00000560682 ABCA10Q8WWZ4 1543 aa9.08□□□□□ -0.96
SLTM-224ENST00000560682 BIVM-ERCC5R4GMW8 1640 aa9.05□□□□□ -0.96
SLTM-224ENST00000560682 ADAMTS12P58397 1594 aa9.05□□□□□ -0.96
SLTM-224ENST00000560682 GRIN2AQ12879 1464 aa9.02□□□□□ -0.96
SLTM-224ENST00000560682 TOP2BQ02880 1626 aa9.02□□□□□ -0.96
SLTM-224ENST00000560682 SHROOM2Q13796 1616 aa9.02□□□□□ -0.97
SLTM-224ENST00000560682 CEP170Q5SW79 1584 aa9□□□□□ -0.97
SLTM-224ENST00000560682 NUP160Q12769 1436 aa8.99□□□□□ -0.97
SLTM-224ENST00000560682 WRNQ14191 1432 aaPredicted RBP eCLIP8.99□□□□□ -0.97
SLTM-224ENST00000560682 KIF13AQ9H1H9 1805 aa8.99□□□□□ -0.97
SLTM-224ENST00000560682 ERICH3Q5RHP9 1530 aa8.99□□□□□ -0.97
SLTM-224ENST00000560682 ERCC6L2Q5T890 1561 aa8.99□□□□□ -0.97
SLTM-224ENST00000560682 FHAD1B1AJZ9 1412 aa8.97□□□□□ -0.97
SLTM-224ENST00000560682 RUSC2Q8N2Y8 1516 aa8.93□□□□□ -0.98
SLTM-224ENST00000560682 SUPT5HO00267 1087 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms