RNA–Protein interactions for RNA: ENST00000560563.1

ACTC1-203, Transcript of actin, alpha, cardiac muscle 1, humanhuman

TSL 2

Gene ACTC1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-203ENST00000560563 AEBP2Q6ZN18 517 aaPredicted RBP25.97■■□□□ 1.75
ACTC1-203ENST00000560563 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
ACTC1-203ENST00000560563 SENP3Q9H4L4 574 aaPredicted RBP22.1■■□□□ 1.13
ACTC1-203ENST00000560563 PHF23Q9BUL5 403 aaPredicted RBP21.88■■□□□ 1.09
ACTC1-203ENST00000560563 FOXD1Q16676 465 aa20.61■□□□□ 0.89
ACTC1-203ENST00000560563 PLPPR3Q6T4P5 718 aa19.87■□□□□ 0.77
ACTC1-203ENST00000560563 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
ACTC1-203ENST00000560563 PPP6R1Q9UPN7 881 aa19.41■□□□□ 0.7
ACTC1-203ENST00000560563 ADRA2BP18089 450 aa19.39■□□□□ 0.69
ACTC1-203ENST00000560563 PIAS4Q8N2W9 510 aaPredicted RBP19.33■□□□□ 0.68
ACTC1-203ENST00000560563 MSH5O43196 834 aa19.2■□□□□ 0.66
ACTC1-203ENST00000560563 POTEDQ86YR6 584 aa18.52■□□□□ 0.56
ACTC1-203ENST00000560563 MAPK8IP2Q13387 824 aaPredicted RBP17.78■□□□□ 0.44
ACTC1-203ENST00000560563 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
ACTC1-203ENST00000560563 DMRT2Q9Y5R5 561 aa17.54■□□□□ 0.4
ACTC1-203ENST00000560563 PPP4R3CPQ6ZMV5 832 aa17.47■□□□□ 0.39
ACTC1-203ENST00000560563 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
ACTC1-203ENST00000560563 CNKSR2Q8WXI2 1034 aa17.07■□□□□ 0.32
ACTC1-203ENST00000560563 DCAF8L1A6NGE4 600 aa16.98■□□□□ 0.31
ACTC1-203ENST00000560563 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
ACTC1-203ENST00000560563 RNF216Q9NWF9 866 aaPredicted RBP16.86■□□□□ 0.29
ACTC1-203ENST00000560563 NCBP3Q53F19 620 aaKnown RBP16.83■□□□□ 0.28
ACTC1-203ENST00000560563 NPM3O75607 178 aaKnown RBP16.59■□□□□ 0.25
ACTC1-203ENST00000560563 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
ACTC1-203ENST00000560563 ABCC9O60706 1549 aa16.48■□□□□ 0.23
ACTC1-203ENST00000560563 KCNA4P22459 653 aa16.44■□□□□ 0.22
ACTC1-203ENST00000560563 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
ACTC1-203ENST00000560563 ZCCHC6Q5VYS8 1495 aaKnown RBP16.3■□□□□ 0.2
ACTC1-203ENST00000560563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.19
ACTC1-203ENST00000560563 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
ACTC1-203ENST00000560563 DCAF8L2P0C7V8 631 aa16.17■□□□□ 0.18
ACTC1-203ENST00000560563 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
ACTC1-203ENST00000560563 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
ACTC1-203ENST00000560563 MYO15BQ96JP2 1530 aa16.08■□□□□ 0.16
ACTC1-203ENST00000560563 NACADO15069 1562 aa16.05■□□□□ 0.16
ACTC1-203ENST00000560563 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
ACTC1-203ENST00000560563 U3KPZ7 1027 aaPredicted RBP15.86■□□□□ 0.13
ACTC1-203ENST00000560563 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
ACTC1-203ENST00000560563 SCRIBQ14160 1630 aa15.68■□□□□ 0.1
ACTC1-203ENST00000560563 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
ACTC1-203ENST00000560563 CAPN15O75808 1086 aa15.63■□□□□ 0.09
ACTC1-203ENST00000560563 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
ACTC1-203ENST00000560563 UNC13AQ9UPW8 1703 aa15.58■□□□□ 0.08
ACTC1-203ENST00000560563 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
ACTC1-203ENST00000560563 BICRAQ9NZM4 1560 aa15.49■□□□□ 0.07
ACTC1-203ENST00000560563 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
ACTC1-203ENST00000560563 TRHP20396 242 aaPredicted RBP15.44■□□□□ 0.06
ACTC1-203ENST00000560563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
ACTC1-203ENST00000560563 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
ACTC1-203ENST00000560563 DSG3P32926 999 aa15.42■□□□□ 0.06
ACTC1-203ENST00000560563 APLP2Q06481 763 aa15.41■□□□□ 0.06
ACTC1-203ENST00000560563 SAMD1Q6SPF0 538 aaPredicted RBP15.37■□□□□ 0.05
ACTC1-203ENST00000560563 MYCNP04198 464 aaPredicted RBP15.32■□□□□ 0.04
ACTC1-203ENST00000560563 ABCB7O75027 752 aa15.31■□□□□ 0.04
ACTC1-203ENST00000560563 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
ACTC1-203ENST00000560563 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
ACTC1-203ENST00000560563 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
ACTC1-203ENST00000560563 ZBTB22O15209 634 aa15.1■□□□□ 0.01
ACTC1-203ENST00000560563 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
ACTC1-203ENST00000560563 EIF4G1Q04637 1599 aaKnown RBP15.06■□□□□ 0
ACTC1-203ENST00000560563 SMARCA4P51532 1647 aa15.03■□□□□ -0
ACTC1-203ENST00000560563 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
ACTC1-203ENST00000560563 POLA2Q14181 598 aa15.02■□□□□ -0
ACTC1-203ENST00000560563 ATF5Q9Y2D1 282 aaPredicted RBP15.02■□□□□ -0
ACTC1-203ENST00000560563 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
ACTC1-203ENST00000560563 CC2D2AQ9P2K1 1620 aa14.91□□□□□ -0.02
ACTC1-203ENST00000560563 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
ACTC1-203ENST00000560563 PEG3Q9GZU2 1588 aa14.89□□□□□ -0.03
ACTC1-203ENST00000560563 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
ACTC1-203ENST00000560563 SMARCA2P51531 1590 aa14.87□□□□□ -0.03
ACTC1-203ENST00000560563 WIZO95785 1651 aa14.87□□□□□ -0.03
ACTC1-203ENST00000560563 NCAPD3P42695 1498 aa14.83□□□□□ -0.03
ACTC1-203ENST00000560563 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.04
ACTC1-203ENST00000560563 HMGXB3Q12766 1538 aa14.76□□□□□ -0.05
ACTC1-203ENST00000560563 TOP2AP11388 1531 aaKnown RBP14.73□□□□□ -0.05
ACTC1-203ENST00000560563 ATXN8OSP0DMR3 200 aa14.71□□□□□ -0.05
ACTC1-203ENST00000560563 RBM42Q9BTD8 480 aaKnown RBP14.7□□□□□ -0.06
ACTC1-203ENST00000560563 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
ACTC1-203ENST00000560563 CCDC88BA6NC98 1476 aa14.58□□□□□ -0.08
ACTC1-203ENST00000560563 POTEHQ6S545 545 aa14.55□□□□□ -0.08
ACTC1-203ENST00000560563 CSRNP3Q8WYN3 585 aa14.54□□□□□ -0.08
ACTC1-203ENST00000560563 EHMT2Q96KQ7 1210 aa14.54□□□□□ -0.08
ACTC1-203ENST00000560563 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
ACTC1-203ENST00000560563 CADPSQ9ULU8 1353 aa14.43□□□□□ -0.1
ACTC1-203ENST00000560563 FBLN2P98095 1184 aa14.41□□□□□ -0.1
ACTC1-203ENST00000560563 CFTRP13569 1480 aa14.4□□□□□ -0.1
ACTC1-203ENST00000560563 AKT1S1Q96B36 256 aa14.39□□□□□ -0.11
ACTC1-203ENST00000560563 LAMC3Q9Y6N6 1575 aa14.36□□□□□ -0.11
ACTC1-203ENST00000560563 NESP48681 1621 aa14.36□□□□□ -0.11
ACTC1-203ENST00000560563 CHRDL2Q6WN34 429 aa14.35□□□□□ -0.11
ACTC1-203ENST00000560563 REM2Q8IYK8 340 aaPredicted RBP14.3□□□□□ -0.12
ACTC1-203ENST00000560563 MKRN4PQ13434 485 aaPredicted RBP14.29□□□□□ -0.12
ACTC1-203ENST00000560563 PDS5BQ9NTI5 1447 aa14.27□□□□□ -0.12
ACTC1-203ENST00000560563 PRDM2Q13029 1718 aa14.25□□□□□ -0.13
ACTC1-203ENST00000560563 FANCD2Q9BXW9 1451 aa14.25□□□□□ -0.13
ACTC1-203ENST00000560563 SPDYE2BA6NHP3 402 aa14.2□□□□□ -0.14
ACTC1-203ENST00000560563 SPDYE6P0CI01 402 aa14.2□□□□□ -0.14
ACTC1-203ENST00000560563 SPDYE2Q495Y8 402 aa14.2□□□□□ -0.14
ACTC1-203ENST00000560563 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
ACTC1-203ENST00000560563 ERCC6Q03468 1493 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms