RNA–Protein interactions for RNA: ENST00000560506.5

TCF12-217, Transcript of transcription factor 12, humanhuman

TSL 4

Gene TCF12, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-217ENST00000560506 AEBP2Q6ZN18 517 aaPredicted RBP25.45■■□□□ 1.66
TCF12-217ENST00000560506 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
TCF12-217ENST00000560506 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
TCF12-217ENST00000560506 PHF23Q9BUL5 403 aaPredicted RBP21.62■■□□□ 1.05
TCF12-217ENST00000560506 FOXD1Q16676 465 aa20.14■□□□□ 0.81
TCF12-217ENST00000560506 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
TCF12-217ENST00000560506 ADRA2BP18089 450 aa19.16■□□□□ 0.66
TCF12-217ENST00000560506 PPP6R1Q9UPN7 881 aa19.16■□□□□ 0.66
TCF12-217ENST00000560506 PIAS4Q8N2W9 510 aaPredicted RBP18.98■□□□□ 0.63
TCF12-217ENST00000560506 MSH5O43196 834 aa18.72■□□□□ 0.59
TCF12-217ENST00000560506 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
TCF12-217ENST00000560506 PPP4R3CPQ6ZMV5 832 aa17.54■□□□□ 0.4
TCF12-217ENST00000560506 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
TCF12-217ENST00000560506 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
TCF12-217ENST00000560506 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
TCF12-217ENST00000560506 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
TCF12-217ENST00000560506 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
TCF12-217ENST00000560506 KCNA4P22459 653 aa16.83■□□□□ 0.28
TCF12-217ENST00000560506 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
TCF12-217ENST00000560506 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
TCF12-217ENST00000560506 NPM3O75607 178 aaKnown RBP16.74■□□□□ 0.27
TCF12-217ENST00000560506 DCAF8L1A6NGE4 600 aa16.62■□□□□ 0.25
TCF12-217ENST00000560506 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
TCF12-217ENST00000560506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.16
TCF12-217ENST00000560506 SLC4A1APQ9BWU0 796 aaKnown RBP16.02■□□□□ 0.16
TCF12-217ENST00000560506 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
TCF12-217ENST00000560506 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
TCF12-217ENST00000560506 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
TCF12-217ENST00000560506 C1QBPQ07021 282 aaKnown RBP15.8■□□□□ 0.12
TCF12-217ENST00000560506 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
TCF12-217ENST00000560506 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
TCF12-217ENST00000560506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
TCF12-217ENST00000560506 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.08
TCF12-217ENST00000560506 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
TCF12-217ENST00000560506 ZBTB22O15209 634 aa15.44■□□□□ 0.06
TCF12-217ENST00000560506 APLP2Q06481 763 aa15.44■□□□□ 0.06
TCF12-217ENST00000560506 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
TCF12-217ENST00000560506 CAPN15O75808 1086 aa15.38■□□□□ 0.05
TCF12-217ENST00000560506 SPINK5Q9NQ38 1064 aaPredicted RBP15.37■□□□□ 0.05
TCF12-217ENST00000560506 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
TCF12-217ENST00000560506 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
TCF12-217ENST00000560506 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
TCF12-217ENST00000560506 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
TCF12-217ENST00000560506 DSG3P32926 999 aa15.12■□□□□ 0.01
TCF12-217ENST00000560506 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
TCF12-217ENST00000560506 ATF5Q9Y2D1 282 aaPredicted RBP15.06■□□□□ 0
TCF12-217ENST00000560506 ABCB7O75027 752 aa15.04■□□□□ -0
TCF12-217ENST00000560506 POLA2Q14181 598 aa14.92□□□□□ -0.02
TCF12-217ENST00000560506 ZBTB12Q9Y330 459 aaPredicted RBP14.68□□□□□ -0.06
TCF12-217ENST00000560506 FBLN2P98095 1184 aa14.54□□□□□ -0.08
TCF12-217ENST00000560506 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
TCF12-217ENST00000560506 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
TCF12-217ENST00000560506 MKRN4PQ13434 485 aaPredicted RBP14.38□□□□□ -0.11
TCF12-217ENST00000560506 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
TCF12-217ENST00000560506 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
TCF12-217ENST00000560506 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
TCF12-217ENST00000560506 AKT1S1Q96B36 256 aa14.22□□□□□ -0.13
TCF12-217ENST00000560506 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
TCF12-217ENST00000560506 REM2Q8IYK8 340 aaPredicted RBP14.06□□□□□ -0.16
TCF12-217ENST00000560506 SSUH2Q9Y2M2 353 aa14.06□□□□□ -0.16
TCF12-217ENST00000560506 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
TCF12-217ENST00000560506 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
TCF12-217ENST00000560506 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
TCF12-217ENST00000560506 PITPNM1O00562 1244 aa13.9□□□□□ -0.18
TCF12-217ENST00000560506 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
TCF12-217ENST00000560506 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
TCF12-217ENST00000560506 FKBP8Q14318 412 aa13.79□□□□□ -0.2
TCF12-217ENST00000560506 POTEHQ6S545 545 aa13.78□□□□□ -0.2
TCF12-217ENST00000560506 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
TCF12-217ENST00000560506 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
TCF12-217ENST00000560506 PIP4P2Q8N4L2 257 aa13.69□□□□□ -0.22
TCF12-217ENST00000560506 FXR2P51116 673 aaKnown RBP eCLIP13.68□□□□□ -0.22
TCF12-217ENST00000560506 PROM2Q8N271 834 aa13.67□□□□□ -0.22
TCF12-217ENST00000560506 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
TCF12-217ENST00000560506 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
TCF12-217ENST00000560506 CREBZFQ9NS37 354 aa13.41□□□□□ -0.26
TCF12-217ENST00000560506 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
TCF12-217ENST00000560506 HAX1O00165 279 aa13.37□□□□□ -0.27
TCF12-217ENST00000560506 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
TCF12-217ENST00000560506 PLEKHG5O94827 1062 aa13.34□□□□□ -0.27
TCF12-217ENST00000560506 MIER1Q8N108 512 aa13.34□□□□□ -0.27
TCF12-217ENST00000560506 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
TCF12-217ENST00000560506 NPM1P06748 294 aaKnown RBP eCLIP13.25□□□□□ -0.29
TCF12-217ENST00000560506 C19orf67A6NJJ6 358 aa13.23□□□□□ -0.29
TCF12-217ENST00000560506 MNX1P50219 401 aaPredicted RBP13.2□□□□□ -0.3
TCF12-217ENST00000560506 CD44P16070 742 aaKnown RBP13.18□□□□□ -0.3
TCF12-217ENST00000560506 VASPP50552 380 aaPredicted RBP13.18□□□□□ -0.3
TCF12-217ENST00000560506 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
TCF12-217ENST00000560506 EVX2Q03828 476 aa13.15□□□□□ -0.3
TCF12-217ENST00000560506 SP7Q8TDD2 431 aaPredicted RBP13.14□□□□□ -0.31
TCF12-217ENST00000560506 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
TCF12-217ENST00000560506 KLHL34Q8N239 644 aa13.07□□□□□ -0.32
TCF12-217ENST00000560506 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
TCF12-217ENST00000560506 TSPYL2Q9H2G4 693 aaPredicted RBP13.01□□□□□ -0.33
TCF12-217ENST00000560506 RASEFQ8IZ41 740 aa12.97□□□□□ -0.33
TCF12-217ENST00000560506 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
TCF12-217ENST00000560506 NUBP1P53384 320 aa12.96□□□□□ -0.33
TCF12-217ENST00000560506 IFNLR1Q8IU57 520 aaPredicted RBP12.95□□□□□ -0.34
TCF12-217ENST00000560506 CLCN6P51797 869 aa12.93□□□□□ -0.34
TCF12-217ENST00000560506 GABBR2O75899 941 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms