RNA–Protein interactions for RNA: ENST00000560359.1

GABPB1-AS1-204, GABPB1 antisense RNA 1, humanhuman

TSL 2

Gene GABPB1-AS1, Length 709 nt, Biotype antisense RNA, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-AS1-204ENST00000560359 AQRO60306 1485 aaKnown RBP eCLIP40.94■■■■■ 4.143e-72■■■■■ 35.3
GABPB1-AS1-204ENST00000560359 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.05■□□□□ 0.89e-18■■■■■ 33.3
GABPB1-AS1-204ENST00000560359 GPKOWQ92917 476 aaPredicted RBP eCLIP27.68■■■□□ 2.023e-17■■□□□ 13
GABPB1-AS1-204ENST00000560359 NCBP2P52298 156 aaKnown RBP eCLIP22.32■■□□□ 1.161e-14■■□□□ 12.9
GABPB1-AS1-204ENST00000560359 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.17■■□□□ 1.142e-12■■■■□ 21.4
GABPB1-AS1-204ENST00000560359 CSTF2P33240 577 aaKnown RBP eCLIP23.17■■□□□ 1.34e-10■□□□□ 9.8
GABPB1-AS1-204ENST00000560359 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.72■■□□□ 1.073e-9■□□□□ 10.7
GABPB1-AS1-204ENST00000560359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.05■■■■□ 3.364e-9■■■■□ 24
GABPB1-AS1-204ENST00000560359 PPIGQ13427 754 aaKnown RBP eCLIP26.68■■□□□ 1.862e-8■■■■□ 19.4
GABPB1-AS1-204ENST00000560359 NIPBLQ6KC79 2804 aaeCLIP19.66■□□□□ 0.745e-8■□□□□ 8.6
GABPB1-AS1-204ENST00000560359 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.3■■□□□ 1.641e-7■■□□□ 12.1
GABPB1-AS1-204ENST00000560359 SRSF9Q13242 221 aaKnown RBP eCLIP14.69□□□□□ -0.062e-7■■■■□ 25
GABPB1-AS1-204ENST00000560359 RBM15Q96T37 977 aaKnown RBP eCLIP24.18■■□□□ 1.465e-7■■■■□ 24
GABPB1-AS1-204ENST00000560359 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.06■■■□□ 2.721e-6■■■□□ 17.7
GABPB1-AS1-204ENST00000560359 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.59■■□□□ 1.853e-6■■□□□ 13
GABPB1-AS1-204ENST00000560359 SRSF1Q07955 248 aaKnown RBP eCLIP21.53■■□□□ 1.044e-6■□□□□ 10.4
Retrieved 16 of 16 RNA–protein pairs in 5.3 ms