RNA–Protein interactions for RNA: ENST00000560197.5

AC013652.1-201, humanhuman

TSL 5 BASIC

Gene AC013652.1, Length 1,378 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC013652.1-201ENST00000560197 AEBP2Q6ZN18 517 aaPredicted RBP23.53■■□□□ 1.36
AC013652.1-201ENST00000560197 CHIC1Q5VXU3 224 aa23.23■■□□□ 1.31
AC013652.1-201ENST00000560197 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
AC013652.1-201ENST00000560197 CCDC180Q9P1Z9 1646 aa20.47■□□□□ 0.87
AC013652.1-201ENST00000560197 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
AC013652.1-201ENST00000560197 ABCC9O60706 1549 aa20.13■□□□□ 0.81
AC013652.1-201ENST00000560197 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
AC013652.1-201ENST00000560197 RB1CC1Q8TDY2 1594 aa19.33■□□□□ 0.68
AC013652.1-201ENST00000560197 NACADO15069 1562 aa19.28■□□□□ 0.68
AC013652.1-201ENST00000560197 DCAF8L2P0C7V8 631 aa19.28■□□□□ 0.68
AC013652.1-201ENST00000560197 MYO15BQ96JP2 1530 aa19.15■□□□□ 0.66
AC013652.1-201ENST00000560197 ZCCHC6Q5VYS8 1495 aaKnown RBP19.15■□□□□ 0.66
AC013652.1-201ENST00000560197 DCAF1Q9Y4B6 1507 aa19.03■□□□□ 0.64
AC013652.1-201ENST00000560197 PLPPR3Q6T4P5 718 aa18.97■□□□□ 0.63
AC013652.1-201ENST00000560197 UNC13AQ9UPW8 1703 aa18.82■□□□□ 0.6
AC013652.1-201ENST00000560197 PABPN1Q86U42 306 aaKnown RBP eCLIP18.81■□□□□ 0.6
AC013652.1-201ENST00000560197 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
AC013652.1-201ENST00000560197 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
AC013652.1-201ENST00000560197 SHROOM4Q9ULL8 1493 aa18.56■□□□□ 0.56
AC013652.1-201ENST00000560197 DNAJC5BQ9UF47 199 aa18.55■□□□□ 0.56
AC013652.1-201ENST00000560197 FOXD1Q16676 465 aa18.45■□□□□ 0.54
AC013652.1-201ENST00000560197 EIF4G1Q04637 1599 aaKnown RBP18.26■□□□□ 0.51
AC013652.1-201ENST00000560197 CC2D2AQ9P2K1 1620 aa18.19■□□□□ 0.5
AC013652.1-201ENST00000560197 CECR2Q9BXF3 1484 aa18.11■□□□□ 0.49
AC013652.1-201ENST00000560197 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
AC013652.1-201ENST00000560197 PPP6R1Q9UPN7 881 aa17.97■□□□□ 0.47
AC013652.1-201ENST00000560197 ADRA2BP18089 450 aa17.96■□□□□ 0.47
AC013652.1-201ENST00000560197 SMARCA4P51532 1647 aa17.85■□□□□ 0.45
AC013652.1-201ENST00000560197 BAZ1AQ9NRL2 1556 aaPredicted RBP17.84■□□□□ 0.45
AC013652.1-201ENST00000560197 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
AC013652.1-201ENST00000560197 ATAD2BQ9ULI0 1458 aa17.79■□□□□ 0.44
AC013652.1-201ENST00000560197 SMARCA2P51531 1590 aa17.78■□□□□ 0.44
AC013652.1-201ENST00000560197 MROH2BQ7Z745 1585 aa17.72■□□□□ 0.43
AC013652.1-201ENST00000560197 HMGXB3Q12766 1538 aa17.7■□□□□ 0.42
AC013652.1-201ENST00000560197 PEG3Q9GZU2 1588 aa17.69■□□□□ 0.42
AC013652.1-201ENST00000560197 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
AC013652.1-201ENST00000560197 WIZO95785 1651 aa17.5■□□□□ 0.39
AC013652.1-201ENST00000560197 RSF1Q96T23 1441 aaPredicted RBP17.5■□□□□ 0.39
AC013652.1-201ENST00000560197 PIAS4Q8N2W9 510 aaPredicted RBP17.46■□□□□ 0.39
AC013652.1-201ENST00000560197 NESP48681 1621 aa17.38■□□□□ 0.37
AC013652.1-201ENST00000560197 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
AC013652.1-201ENST00000560197 TOP2AP11388 1531 aaKnown RBP17.34■□□□□ 0.37
AC013652.1-201ENST00000560197 LAMC3Q9Y6N6 1575 aa17.34■□□□□ 0.37
AC013652.1-201ENST00000560197 CADPSQ9ULU8 1353 aa17.29■□□□□ 0.36
AC013652.1-201ENST00000560197 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
AC013652.1-201ENST00000560197 CUX2O14529 1486 aa17.23■□□□□ 0.35
AC013652.1-201ENST00000560197 CFTRP13569 1480 aa17.16■□□□□ 0.34
AC013652.1-201ENST00000560197 KIF21AQ7Z4S6 1674 aa17.15■□□□□ 0.34
AC013652.1-201ENST00000560197 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
AC013652.1-201ENST00000560197 CCDC88BA6NC98 1476 aa17.14■□□□□ 0.33
AC013652.1-201ENST00000560197 FANCD2Q9BXW9 1451 aa17.08■□□□□ 0.32
AC013652.1-201ENST00000560197 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
AC013652.1-201ENST00000560197 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
AC013652.1-201ENST00000560197 SUPT5HO00267 1087 aaKnown RBP17.01■□□□□ 0.31
AC013652.1-201ENST00000560197 WDR62O43379 1518 aa17■□□□□ 0.31
AC013652.1-201ENST00000560197 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
AC013652.1-201ENST00000560197 MSH5O43196 834 aa16.91■□□□□ 0.3
AC013652.1-201ENST00000560197 URB2Q14146 1524 aaKnown RBP16.9■□□□□ 0.3
AC013652.1-201ENST00000560197 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
AC013652.1-201ENST00000560197 DNAJC5Q9H3Z4 198 aa16.79■□□□□ 0.28
AC013652.1-201ENST00000560197 TOPBP1Q92547 1522 aa16.79■□□□□ 0.28
AC013652.1-201ENST00000560197 DNMBPQ6XZF7 1577 aa16.76■□□□□ 0.27
AC013652.1-201ENST00000560197 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
AC013652.1-201ENST00000560197 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
AC013652.1-201ENST00000560197 KCNA4P22459 653 aa16.66■□□□□ 0.26
AC013652.1-201ENST00000560197 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
AC013652.1-201ENST00000560197 ZNF608Q9ULD9 1512 aaPredicted RBP16.63■□□□□ 0.25
AC013652.1-201ENST00000560197 CUX1P39880 1505 aa16.62■□□□□ 0.25
AC013652.1-201ENST00000560197 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
AC013652.1-201ENST00000560197 SOGA1O94964 1423 aa16.59■□□□□ 0.25
AC013652.1-201ENST00000560197 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
AC013652.1-201ENST00000560197 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
AC013652.1-201ENST00000560197 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
AC013652.1-201ENST00000560197 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.24
AC013652.1-201ENST00000560197 WRNQ14191 1432 aaPredicted RBP eCLIP16.51■□□□□ 0.23
AC013652.1-201ENST00000560197 OSCARQ8IYS5 282 aa16.51■□□□□ 0.23
AC013652.1-201ENST00000560197 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
AC013652.1-201ENST00000560197 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
AC013652.1-201ENST00000560197 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
AC013652.1-201ENST00000560197 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
AC013652.1-201ENST00000560197 SYNJ1O43426 1573 aa16.44■□□□□ 0.22
AC013652.1-201ENST00000560197 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
AC013652.1-201ENST00000560197 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
AC013652.1-201ENST00000560197 GRIN2BQ13224 1484 aa16.41■□□□□ 0.22
AC013652.1-201ENST00000560197 GAPVD1Q14C86 1478 aa16.39■□□□□ 0.21
AC013652.1-201ENST00000560197 SNAPC4Q5SXM2 1469 aa16.38■□□□□ 0.21
AC013652.1-201ENST00000560197 FBLN2P98095 1184 aa16.38■□□□□ 0.21
AC013652.1-201ENST00000560197 NCBP3Q53F19 620 aaKnown RBP16.38■□□□□ 0.21
AC013652.1-201ENST00000560197 MAGI1Q96QZ7 1491 aaPredicted RBP16.37■□□□□ 0.21
AC013652.1-201ENST00000560197 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
AC013652.1-201ENST00000560197 CHD1O14646 1710 aa16.34■□□□□ 0.21
AC013652.1-201ENST00000560197 CHMP7Q8WUX9 453 aaPredicted RBP16.33■□□□□ 0.2
AC013652.1-201ENST00000560197 PBRM1Q86U86 1689 aa16.33■□□□□ 0.2
AC013652.1-201ENST00000560197 SYNJ2O15056 1496 aa16.31■□□□□ 0.2
AC013652.1-201ENST00000560197 ERICH3Q5RHP9 1530 aa16.23■□□□□ 0.19
AC013652.1-201ENST00000560197 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
AC013652.1-201ENST00000560197 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
AC013652.1-201ENST00000560197 CNKSR2Q8WXI2 1034 aa16.22■□□□□ 0.19
AC013652.1-201ENST00000560197 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
AC013652.1-201ENST00000560197 ADAMTS12P58397 1594 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms