RNA–Protein interactions for RNA: ENST00000560012.5

SLTM-221, Transcript of SAFB like transcription modulator, humanhuman

TSL 4

Gene SLTM, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-221ENST00000560012 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
SLTM-221ENST00000560012 CCDC180Q9P1Z9 1646 aa20.23■□□□□ 0.83
SLTM-221ENST00000560012 AEBP2Q6ZN18 517 aaPredicted RBP20.2■□□□□ 0.82
SLTM-221ENST00000560012 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
SLTM-221ENST00000560012 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
SLTM-221ENST00000560012 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
SLTM-221ENST00000560012 MYO15BQ96JP2 1530 aa18.97■□□□□ 0.63
SLTM-221ENST00000560012 ABCC9O60706 1549 aa18.92■□□□□ 0.62
SLTM-221ENST00000560012 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
SLTM-221ENST00000560012 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
SLTM-221ENST00000560012 NACADO15069 1562 aa18.78■□□□□ 0.6
SLTM-221ENST00000560012 RB1CC1Q8TDY2 1594 aa18.58■□□□□ 0.56
SLTM-221ENST00000560012 SCRIBQ14160 1630 aa18.55■□□□□ 0.56
SLTM-221ENST00000560012 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
SLTM-221ENST00000560012 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
SLTM-221ENST00000560012 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
SLTM-221ENST00000560012 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
SLTM-221ENST00000560012 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
SLTM-221ENST00000560012 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
SLTM-221ENST00000560012 BAZ1AQ9NRL2 1556 aaPredicted RBP17.9■□□□□ 0.46
SLTM-221ENST00000560012 SMARCA4P51532 1647 aa17.82■□□□□ 0.44
SLTM-221ENST00000560012 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
SLTM-221ENST00000560012 WIZO95785 1651 aa17.76■□□□□ 0.43
SLTM-221ENST00000560012 PEG3Q9GZU2 1588 aa17.63■□□□□ 0.41
SLTM-221ENST00000560012 TOP2AP11388 1531 aaKnown RBP17.62■□□□□ 0.41
SLTM-221ENST00000560012 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
SLTM-221ENST00000560012 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
SLTM-221ENST00000560012 ATAD2BQ9ULI0 1458 aa17.49■□□□□ 0.39
SLTM-221ENST00000560012 EIF4G1Q04637 1599 aaKnown RBP17.46■□□□□ 0.39
SLTM-221ENST00000560012 CCDC88BA6NC98 1476 aa17.4■□□□□ 0.38
SLTM-221ENST00000560012 BAZ1BQ9UIG0 1483 aaKnown RBP17.37■□□□□ 0.37
SLTM-221ENST00000560012 HMGXB3Q12766 1538 aa17.34■□□□□ 0.37
SLTM-221ENST00000560012 NCAPD3P42695 1498 aa17.31■□□□□ 0.36
SLTM-221ENST00000560012 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
SLTM-221ENST00000560012 CC2D2AQ9P2K1 1620 aa17.17■□□□□ 0.34
SLTM-221ENST00000560012 TRIM41Q8WV44 630 aa17.1■□□□□ 0.33
SLTM-221ENST00000560012 ABCC8Q09428 1581 aa17.05■□□□□ 0.32
SLTM-221ENST00000560012 CFTRP13569 1480 aa16.96■□□□□ 0.31
SLTM-221ENST00000560012 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
SLTM-221ENST00000560012 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
SLTM-221ENST00000560012 SYNJ1O43426 1573 aa16.9■□□□□ 0.3
SLTM-221ENST00000560012 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
SLTM-221ENST00000560012 TOP2BQ02880 1626 aa16.83■□□□□ 0.28
SLTM-221ENST00000560012 BIVM-ERCC5R4GMW8 1640 aa16.83■□□□□ 0.28
SLTM-221ENST00000560012 LOC105371045A0A1W2PR82 267 aa16.8■□□□□ 0.28
SLTM-221ENST00000560012 EEA1Q15075 1411 aa16.79■□□□□ 0.28
SLTM-221ENST00000560012 FAM9AQ8IZU1 332 aaPredicted RBP16.76■□□□□ 0.27
SLTM-221ENST00000560012 CUX1P39880 1505 aa16.75■□□□□ 0.27
SLTM-221ENST00000560012 SOGA1O94964 1423 aa16.74■□□□□ 0.27
SLTM-221ENST00000560012 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
SLTM-221ENST00000560012 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
SLTM-221ENST00000560012 RUSC2Q8N2Y8 1516 aa16.67■□□□□ 0.26
SLTM-221ENST00000560012 NESP48681 1621 aa16.66■□□□□ 0.26
SLTM-221ENST00000560012 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
SLTM-221ENST00000560012 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
SLTM-221ENST00000560012 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
SLTM-221ENST00000560012 KIF21BO75037 1637 aa16.59■□□□□ 0.25
SLTM-221ENST00000560012 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
SLTM-221ENST00000560012 GOLGA3Q08378 1498 aa16.54■□□□□ 0.24
SLTM-221ENST00000560012 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
SLTM-221ENST00000560012 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
SLTM-221ENST00000560012 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
SLTM-221ENST00000560012 TNIKQ9UKE5 1360 aa16.51■□□□□ 0.23
SLTM-221ENST00000560012 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
SLTM-221ENST00000560012 KIF21AQ7Z4S6 1674 aa16.5■□□□□ 0.23
SLTM-221ENST00000560012 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
SLTM-221ENST00000560012 EHMT2Q96KQ7 1210 aa16.46■□□□□ 0.23
SLTM-221ENST00000560012 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
SLTM-221ENST00000560012 POLA1P09884 1462 aaPredicted RBP16.45■□□□□ 0.22
SLTM-221ENST00000560012 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
SLTM-221ENST00000560012 CUX2O14529 1486 aa16.43■□□□□ 0.22
SLTM-221ENST00000560012 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
SLTM-221ENST00000560012 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
SLTM-221ENST00000560012 CEP162Q5TB80 1403 aa16.42■□□□□ 0.22
SLTM-221ENST00000560012 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
SLTM-221ENST00000560012 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
SLTM-221ENST00000560012 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
SLTM-221ENST00000560012 UBTFP17480 764 aaKnown RBP16.35■□□□□ 0.21
SLTM-221ENST00000560012 IGF1RP08069 1367 aa16.34■□□□□ 0.21
SLTM-221ENST00000560012 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
SLTM-221ENST00000560012 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
SLTM-221ENST00000560012 WDR62O43379 1518 aa16.29■□□□□ 0.2
SLTM-221ENST00000560012 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
SLTM-221ENST00000560012 CUL7Q14999 1698 aa16.26■□□□□ 0.19
SLTM-221ENST00000560012 CLIP1P30622 1438 aa16.26■□□□□ 0.19
SLTM-221ENST00000560012 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
SLTM-221ENST00000560012 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
SLTM-221ENST00000560012 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
SLTM-221ENST00000560012 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
SLTM-221ENST00000560012 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
SLTM-221ENST00000560012 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
SLTM-221ENST00000560012 VPS8Q8N3P4 1428 aa16.15■□□□□ 0.18
SLTM-221ENST00000560012 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
SLTM-221ENST00000560012 PBRM1Q86U86 1689 aa16.14■□□□□ 0.17
SLTM-221ENST00000560012 ARAP1Q96P48 1450 aa16.13■□□□□ 0.17
SLTM-221ENST00000560012 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
SLTM-221ENST00000560012 ARHGAP35Q9NRY4 1499 aa16.09■□□□□ 0.17
SLTM-221ENST00000560012 ADAMTS12P58397 1594 aa16.09■□□□□ 0.17
SLTM-221ENST00000560012 CTTNBP2Q8WZ74 1663 aa16.08■□□□□ 0.17
SLTM-221ENST00000560012 GRIN2BQ13224 1484 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms